FFCP PHASE1:Hg19::chr3:49057830..49057850,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25915 | |EntrezGene=25915 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29918 | |HGNC=29918 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-41bp_to_ENST00000326912_5end | |association_with_transcript=-41bp_to_ENST00000326912_5end | ||
|cluster_id=chr3:49057830..49057850,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_7_at_NDUFAF3_5end | |description=CAGE_peak_7_at_NDUFAF3_5end | ||
|id=chr3:49057830..49057850,+ | |id=chr3:49057830..49057850,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.41e-28!182;CL:0000037!2.15e-27!172;CL:0000566!2.15e-27!172;CL:0002032!2.05e-23!165;CL:0000837!2.05e-23!165;CL:0000738!6.39e-15!140;CL:0000763!6.75e-15!112;CL:0000049!6.75e-15!112;CL:0002031!8.13e-09!124;CL:0000945!1.70e-08!24;CL:0000826!1.70e-08!24;CL:0000542!2.35e-08!53;CL:0000051!2.35e-08!53;CL:0002087!5.14e-08!119;CL:0000838!8.62e-08!52;CL:0000080!1.84e-07!6 | |ontology_enrichment_celltype=CL:0000988!4.41e-28!182;CL:0000037!2.15e-27!172;CL:0000566!2.15e-27!172;CL:0002032!2.05e-23!165;CL:0000837!2.05e-23!165;CL:0000738!6.39e-15!140;CL:0000763!6.75e-15!112;CL:0000049!6.75e-15!112;CL:0002031!8.13e-09!124;CL:0000945!1.70e-08!24;CL:0000826!1.70e-08!24;CL:0000542!2.35e-08!53;CL:0000051!2.35e-08!53;CL:0002087!5.14e-08!119;CL:0000838!8.62e-08!52;CL:0000080!1.84e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.37e-09;5!CL:0000226;1.85e-09;3!CL:0000842;1.85e-09;3!CL:0000081;5.60e-07;11!CL:0000945;9.43e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.12e-25,177;CL:0000037,6.18e-23,168;CL:0002032,1.69e-16,161;CL:0000837,1.69e-16,161;CL:0000738,2.66e-12,136;CL:0000763,3.96e-10,108;CL:0000049,3.96e-10,108;CL:0000097,1.40e-09,5;CL:0002028,1.40e-09,5;CL:0000226,1.94e-09,3;CL:0000842,1.94e-09,3;CL:0000081,5.43e-07,11;CL:0000542,8.45e-07,53;CL:0000051,8.45e-07,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.15e-24!51;DOID:0060083!2.15e-24!51;DOID:1240!2.60e-21!39;DOID:8692!2.02e-16!31 | |ontology_enrichment_disease=DOID:2531!2.15e-24!51;DOID:0060083!2.15e-24!51;DOID:1240!2.60e-21!39;DOID:8692!2.02e-16!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;6.01e-20;39!DOID:8692;8.62e-18;31!DOID:2531;1.18e-16;51!DOID:0060083;1.18e-16;51!DOID:74;3.60e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.66e-26,39;DOID:2531,8.90e-26,51;DOID:0060083,8.90e-26,51;DOID:8692,6.15e-19,31;DOID:74,4.85e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.46e-18!15;UBERON:0000179!3.46e-18!15;UBERON:0000463!3.46e-18!15;UBERON:0002193!4.13e-11!112;UBERON:0002390!1.23e-09!102;UBERON:0003061!1.23e-09!102 | |ontology_enrichment_uberon=UBERON:0000178!3.46e-18!15;UBERON:0000179!3.46e-18!15;UBERON:0000463!3.46e-18!15;UBERON:0002193!4.13e-11!112;UBERON:0002390!1.23e-09!102;UBERON:0003061!1.23e-09!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.66e-46;15!UBERON:0000179;9.66e-46;15!UBERON:0000463;9.66e-46;15!UBERON:0002390;9.09e-27;32!UBERON:0002193;1.13e-14;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.08e-45,15;UBERON:0000179,1.08e-45,15;UBERON:0000463,1.08e-45,15;UBERON:0002390,2.16e-13,98;UBERON:0003061,2.16e-13,98;UBERON:0002193,1.07e-12,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0.487932798790507,0,0,0,0,0,0,0.840547463227464,1.47781061009902,0.865818594450472,2.75354993794233,2.30297638858328,0.309632246632152,0,0,0,0.46480320348181,0.995184627411951,3.52320527201817,0,0.200544447470142,0.434021741431704,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0.344745680736619,0,0,0,0,0.449446968890169,0.306083892370903,0,0.639337125799041,0,0,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0.212604299965044,0.209658645508376,0,0,0,0,0,0,1.75996244461323,0,0,0.426730222566507,0.400395987036012,2.87376219977242,0,0,0,0,0,3.96513985737078,6.72610275577843,5.53106578027662,0.196709770113833,0,0.205601498999509,0,0,0,0,1.89397776704795,0,0,0,0.640456598628376,0.780356085359269,0.986627427622057,0.276350017785848,0.579606171470105,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0.174129737299267,0.26591592103773,0,4.0039643754609,2.22874500797739,0,0,0,0,0,0,0,0,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0.184099797284599,0,0,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,1.38895653772983,0.380508304469197,0,0,0,0.234004265139238,0.297262324577456,0,0.16798212819886,0,0,0,0,0,2.28925928434388,1.24396869324463,1.8735593944205,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0.749007023947182,8.97484377612075,4.55857064779639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.06768026122887,1.72571360654893,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0.657779629937804,0.522870902049801,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0.532306030317022,0,0,0.143124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0.404364963146632,0,0,0,0.731140468893853,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,31.9691993816267,43.5843208071154,30.1913009202306,14.2939065274673,13.1635927387582,29.1812990036723,34.0219805460012,46.0012602250677,0,0.962479855263359,0,1.11481905075431,1.58696134274089,0.142283686696828,0.318852545457645,1.99579371432817,3.4470966623826,0.423347165447766,3.89546328329467,0.280797178113459,0.912938716132769,0,0,0.677167111206413,0.963528450622197,1.00899853595524,2.12923118845163,1.37402137902306,2.76516687877612,3.35514161838624,2.66958626739054,1.9538809540204,0.556812347790485,0,2.16364542780786,3.66379164797602,4.22961015263549,0,0.146508179271894,0,3.12041475976939,0,0,0,0,0,0,0,0,0,0,0,0,0,4.18488338567636,0,0.0898683511473268,0,5.62729607249559,0,35.922463852041,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,2.04386596391473,2.82564461511045,0.831058409500782,0,0,0,0,0.794682894901893,0,0,0,0,0,0,0.611030144933625,1.48260564340311,1.72989514525104,2.19286093961456,0,0,0,1.45963831372533,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,1.71986032471617,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0,0,0.114536596165916,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,5.25774708558629,0,0,0,0,0.429226048136571,0.669514372325618,0.201550417460179,0.360299883542404,0,0,0,0,0,1.01607998478941,0,0,0,0.137539436597234,0,0.449947783103001,0,0,0,0,0.157363764404994,0,0,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.246277562248017,0.340776043570843,0.113312091520126,0,2.65013777824443,0,0,0,0.704815022316672,0.427149650270779,0.157204305099666,0,0,1.58089305518355,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0.584580926518165,0.930053882193542,1.96278473107013,0,0,0,4.19973531295353,4.26766918776564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552032215008773,0,0,0,0,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,0.381382095467167,0,0,0.150420656698515,0.60511520611056,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.266107110487916,0.576169937778896,0,0,0,0.354581522651905,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,1.59772660565751,1.99819452718089,0.599646935549574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0.803892390468535,0,0,0.213233981900981,0,0.452122368852043,0.372448285775147,0.224263725161227,0.0636471582781649,0,0,0,0.26940821205835,0.215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| ||
|short_description=p7@NDUFAF3 | |short_description=p7@NDUFAF3 | ||
}} | }} |
Latest revision as of 15:32, 18 September 2015
Short description: | p7@NDUFAF3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NDUFAF3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -41bp_to_ENST00000326912_5end |
EntrezGene: | NDUFAF3 |
HGNC: | 29918 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.12e-25 | 177 |
hematopoietic stem cell | 6.18e-23 | 168 |
hematopoietic oligopotent progenitor cell | 1.69e-16 | 161 |
hematopoietic multipotent progenitor cell | 1.69e-16 | 161 |
leukocyte | 2.66e-12 | 136 |
myeloid cell | 3.96e-10 | 108 |
common myeloid progenitor | 3.96e-10 | 108 |
mast cell | 1.40e-09 | 5 |
basophil mast progenitor cell | 1.40e-09 | 5 |
single nucleate cell | 1.94e-09 | 3 |
mononuclear cell | 1.94e-09 | 3 |
blood cell | 5.43e-07 | 11 |
lymphocyte | 8.45e-07 | 53 |
common lymphoid progenitor | 8.45e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
blood | 1.08e-45 | 15 |
haemolymphatic fluid | 1.08e-45 | 15 |
organism substance | 1.08e-45 | 15 |
hematopoietic system | 2.16e-13 | 98 |
blood island | 2.16e-13 | 98 |
hemolymphoid system | 1.07e-12 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.66e-26 | 39 |
hematologic cancer | 8.90e-26 | 51 |
immune system cancer | 8.90e-26 | 51 |
myeloid leukemia | 6.15e-19 | 31 |
hematopoietic system disease | 4.85e-07 | 2 |