FFCP PHASE1:Hg19::chr10:104155659..104155676,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4791 | |EntrezGene=4791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7795 | |HGNC=7795 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=159bp_to_uc009xxc.2_5end | |association_with_transcript=159bp_to_uc009xxc.2_5end | ||
|cluster_id=chr10:104155659..104155676,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_NFKB2_5end | |description=CAGE_peak_4_at_NFKB2_5end | ||
|id=chr10:104155659..104155676,+ | |id=chr10:104155659..104155676,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.10e-26!45;CL:0002057!7.59e-26!42;CL:0000766!8.40e-25!76;CL:0002009!1.12e-20!65;CL:0000557!1.16e-20!71;CL:0000738!1.48e-20!140;CL:0002194!1.96e-19!63;CL:0000576!1.96e-19!63;CL:0000040!1.96e-19!63;CL:0000559!1.96e-19!63;CL:0000839!1.07e-18!70;CL:0000763!4.88e-17!112;CL:0000049!4.88e-17!112;CL:0002087!2.25e-14!119;CL:0002031!2.71e-14!124;CL:0000988!4.38e-14!182;CL:0000037!4.69e-14!172;CL:0000566!4.69e-14!172;CL:0002032!5.82e-14!165;CL:0000837!5.82e-14!165 | |ontology_enrichment_celltype=CL:0000860!1.10e-26!45;CL:0002057!7.59e-26!42;CL:0000766!8.40e-25!76;CL:0002009!1.12e-20!65;CL:0000557!1.16e-20!71;CL:0000738!1.48e-20!140;CL:0002194!1.96e-19!63;CL:0000576!1.96e-19!63;CL:0000040!1.96e-19!63;CL:0000559!1.96e-19!63;CL:0000839!1.07e-18!70;CL:0000763!4.88e-17!112;CL:0000049!4.88e-17!112;CL:0002087!2.25e-14!119;CL:0002031!2.71e-14!124;CL:0000988!4.38e-14!182;CL:0000037!4.69e-14!172;CL:0000566!4.69e-14!172;CL:0002032!5.82e-14!165;CL:0000837!5.82e-14!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-33;33!CL:0002057;1.44e-33;33!CL:0000473;9.10e-29;39!CL:0000234;9.10e-29;39!CL:0000576;1.01e-21;48!CL:0000766;4.97e-18;69!CL:0000094;6.71e-10;8!CL:0000081;1.41e-08;11!CL:0000763;1.82e-08;100!CL:0000738;3.99e-08;136!CL:0002087;9.53e-08;104!CL:0002393;2.76e-07;6!CL:0002397;2.76e-07;6!CL:0000453;4.44e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.17e-43,48;CL:0000234,5.17e-43,48;CL:0000860,1.72e-42,42;CL:0002057,1.72e-42,42;CL:0000766,4.84e-39,72;CL:0002009,1.40e-34,61;CL:0000557,1.81e-32,67;CL:0002194,2.24e-32,59;CL:0000576,2.24e-32,59;CL:0000040,2.24e-32,59;CL:0000559,2.24e-32,59;CL:0000738,8.86e-32,136;CL:0000839,1.25e-29,66;CL:0000763,2.04e-29,108;CL:0000049,2.04e-29,108;CL:0000988,2.20e-24,177;CL:0000037,6.82e-24,168;CL:0002032,2.90e-23,161;CL:0000837,2.90e-23,161;CL:0002087,9.53e-23,115;CL:0002031,6.74e-22,120;CL:0000094,7.69e-10,8;CL:0000081,1.57e-08,11;CL:0002393,2.48e-07,9;CL:0002397,2.48e-07,9;CL:0000453,4.38e-07,5;CL:0000134,8.11e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;4.89e-31;42!CL:0000049;2.21e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.06e-20!112;UBERON:0002390!2.61e-19!102;UBERON:0003061!2.61e-19!102;UBERON:0002371!7.23e-17!80;UBERON:0002405!7.72e-16!115;UBERON:0001474!4.69e-15!86;UBERON:0004765!1.38e-12!101;UBERON:0001434!1.38e-12!101;UBERON:0003081!3.08e-11!216;UBERON:0000926!7.19e-10!448;UBERON:0004120!7.19e-10!448;UBERON:0006603!7.19e-10!448;UBERON:0002204!3.68e-08!167;UBERON:0001737!8.79e-07!9 | |ontology_enrichment_uberon=UBERON:0002193!1.06e-20!112;UBERON:0002390!2.61e-19!102;UBERON:0003061!2.61e-19!102;UBERON:0002371!7.23e-17!80;UBERON:0002405!7.72e-16!115;UBERON:0001474!4.69e-15!86;UBERON:0004765!1.38e-12!101;UBERON:0001434!1.38e-12!101;UBERON:0003081!3.08e-11!216;UBERON:0000926!7.19e-10!448;UBERON:0004120!7.19e-10!448;UBERON:0006603!7.19e-10!448;UBERON:0002204!3.68e-08!167;UBERON:0001737!8.79e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;1.16e-10;9!UBERON:0001557;1.16e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.62e-30,108;UBERON:0002405,2.58e-28,93;UBERON:0002390,1.13e-27,98;UBERON:0003061,1.13e-27,98;UBERON:0002371,1.69e-26,76;UBERON:0001474,2.24e-24,82;UBERON:0004765,1.18e-20,90;UBERON:0001434,1.45e-19,100;UBERON:0003081,1.14e-13,203;UBERON:0001737,1.08e-10,9;UBERON:0002204,5.05e-09,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,4.18680700783456,0.218441372130172,0,0.247532705920093,0,2.01697543935533,0.602694528023977,0,0.487932798790507,0.246242116153576,0.204000691244253,0,0,0,0.627713197974014,1.60468152070698,2.54511827294832,1.81034797021462,2.36018566109342,2.30297638858328,3.40595471295367,0.919421224478927,1.50602959389125,1.10926203050036,0.0774672005803016,2.70121541726101,0,27.6997704265939,25.6696892761781,18.4459240108474,0,0,0.515151135268373,3.34415949192999,5.66813915533214,7.03493777444667,39.5129362739664,22.6142338412004,29.7318116059299,10.0692337312753,10.7587496742222,18.6820961611982,25.5111803745098,16.1371170895957,74.484567626888,22.7773230846552,16.9201813035864,45.3941438579071,58.1559395504715,41.7207735198922,71.6057580894926,3.95821560224059,6.58230070151385,8.09827026012119,121.307461746748,99.8597995456406,229.198587630372,3.51748131359441,6.25779502104242,9.33912032232002,96.863920421339,110.851568432257,200.004228862639,1.69004229049553,6.37812899895131,3.14487968262564,1.23561494261145,1.50176892841506,2.57160938715328,1.99508920618874,0.79566670879636,1.27864907635244,0,1.09227722252426,0,0.426730222566507,0,0,0,0,0.569212969109448,1.17447437874188,1.91136614062614,3.96513985737078,16.8152568894461,0,0.196709770113833,0.393010762749165,0,0.334372990781356,0.32592226663359,0,1.94826728407911,1.22551502573691,0.294605907474837,0,0,0.25618263945135,0.390178042679635,0.822189523018381,0.276350017785848,0,0,0,0,0.113309342697566,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.403213486449465,1.33720097891754,0.144824403882799,0,1.34140171940727,0.255725123687061,0.722878304769133,0,0.289693037921647,0,0.973269740605272,0.378139268656271,0,0.263504357079378,0.327447688744282,0.364295288292542,0,0,0.696518949197069,0.531831842075461,1.90792499444274,0.571994910780128,0,0,0,0,0,0.838998872419812,0,0.835979866147242,0.258416759169329,0,1.00416183829401,1.61131726843659,3.04108842287405,1.95249646038536,0.367663080345869,0,0.17859945656816,0,0.337834441449967,0,0,0,152.865284225833,178.37892150823,0,0,0.379891534993739,0.397227542439656,0.573673241497627,0.709336764396714,0,3.20246987189115,0.49333509683432,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0,0.469737994575059,0,0,0,0.122834317311768,0,4.75201142912821,1.23633464639278,0,0.718618141816238,0,0,0,0.438977620880838,0,1.50238058906597,0.340296549480063,0.179389635688862,0,0.211931901159562,0,0.412210116953756,0.257640540045629,0,0,0,0,0.184099797284599,0.646584227275248,0,0,0.339121184620975,0.386521706326594,0.545492241181669,1.14721838155602,0.365921118388786,0.530119073285941,0.580969714347592,0.310983165046111,0.756962552626885,0,3.12899064659632,0,1.38134921352481,0,0,7.33502160247032,7.08055698328027,7.95336398615491,7.61028411853518,10.0224544282507,9.72809538355496,4.98875840192608,5.88664395376038,8.84918460976698,0.738155454624648,1.40241773803446,0,0,1.26755034821831,0,0,0,0.122988438543114,0.171567810298526,0.219500570817251,3.37205259772859,0.100528972411631,0.185176890317059,0,1.03993478527958,0,0.231860809950154,0.469634776943287,5.19719211939866,10.1856812766854,5.51737041480335,0,0,0.246217006087397,3.27605971194933,2.67536092119711,0,0.503946384596579,0.567100388969546,0.626909658919938,0.290633938513962,0.383382679165211,0.492663237895943,0.352193736052904,1.24396869324463,0.864719720501769,1.2624243342638,0,0,0,0,0,0.300343057843917,0,0.560655421726804,0,0.07333828582095,0.904902010304444,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0.399891964728228,3.64871341923571,1.50677127429638,0,0.239624855491583,0,0,0.579125226670317,0,0,0,0.985153801009636,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0,57.673540843933,29.9161459204025,38.9550582629873,0.24538298343828,0,0.542530047399471,0,0.535286966391485,0,0.234282829985426,0.601892199455438,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0.391602314925481,0,1.6541442089831,3.45142721309787,7.57765660404455,0.909382714338778,0,0,0.248107807818777,0,0,0,0,0,0,0,0.177561725313127,0.246381468041427,0.519254429183621,0.232420756919918,0.483437798366489,0.200506470303285,0,0.68888668898764,0.910455840033585,1.18011973463482,0.902399225814824,0.15403067420883,0.784349769176855,0,0.316654886678627,1.13733384070897,0.680374821106063,0,1.54227252690289,0,0,0,2.49322802678617,0.447749509444357,0,0,0,0,0.325378394664303,0.515205058238611,0,0,0.574265537996172,0,0,0.580024309752732,0,0.15350367472613,0.275673144969061,0.322260734604821,0.145016693914229,0.426133137080504,0.445160178233687,0.495854746082934,0,0.638063562472921,0.10115778085555,0,0.31481234683064,0.6970372701606,3.08033580176089,1.06461206063404,0,1.11194531462352,0.429374660225974,0.744316738719335,0,0.38126038784765,0,0,0.95460974377781,4.70969184119538,0,0.274537029736055,0.117812402345686,0.404364963146632,0,0,0.48763373908959,4.6305563029944,0,0.6824995570399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| ||
|short_description=p4@NFKB2 | |short_description=p4@NFKB2 | ||
}} | }} |
Latest revision as of 00:55, 16 September 2015
Short description: | p4@NFKB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_NFKB2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 159bp_to_uc009xxc.2_5end |
EntrezGene: | NFKB2 |
HGNC: | 7795 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.17e-43 | 48 |
phagocyte | 5.17e-43 | 48 |
classical monocyte | 1.72e-42 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.72e-42 | 42 |
myeloid leukocyte | 4.84e-39 | 72 |
macrophage dendritic cell progenitor | 1.40e-34 | 61 |
granulocyte monocyte progenitor cell | 1.81e-32 | 67 |
monopoietic cell | 2.24e-32 | 59 |
monocyte | 2.24e-32 | 59 |
monoblast | 2.24e-32 | 59 |
promonocyte | 2.24e-32 | 59 |
leukocyte | 8.86e-32 | 136 |
myeloid lineage restricted progenitor cell | 1.25e-29 | 66 |
myeloid cell | 2.04e-29 | 108 |
common myeloid progenitor | 2.04e-29 | 108 |
hematopoietic cell | 2.20e-24 | 177 |
hematopoietic stem cell | 6.82e-24 | 168 |
hematopoietic oligopotent progenitor cell | 2.90e-23 | 161 |
hematopoietic multipotent progenitor cell | 2.90e-23 | 161 |
nongranular leukocyte | 9.53e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 6.74e-22 | 120 |
granulocyte | 7.69e-10 | 8 |
blood cell | 1.57e-08 | 11 |
intermediate monocyte | 2.48e-07 | 9 |
CD14-positive, CD16-positive monocyte | 2.48e-07 | 9 |
Langerhans cell | 4.38e-07 | 5 |
mesenchymal cell | 8.11e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.62e-30 | 108 |
immune system | 2.58e-28 | 93 |
hematopoietic system | 1.13e-27 | 98 |
blood island | 1.13e-27 | 98 |
bone marrow | 1.69e-26 | 76 |
bone element | 2.24e-24 | 82 |
skeletal element | 1.18e-20 | 90 |
skeletal system | 1.45e-19 | 100 |
lateral plate mesoderm | 1.14e-13 | 203 |
larynx | 1.08e-10 | 9 |
musculoskeletal system | 5.05e-09 | 167 |