FFCP PHASE1:Hg19::chr12:62653903..62653959,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338811 | |EntrezGene=338811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21589 | |HGNC=21589 | ||
|TSSclassifier=strong | |||
|UniProt=F8VWB2 | |UniProt=F8VWB2 | ||
|association_with_transcript=0bp_to_ENST00000547941,ENST00000548541,ENST00000549379,ENST00000552075,uc001sqy.2_5end | |association_with_transcript=0bp_to_ENST00000547941,ENST00000548541,ENST00000549379,ENST00000552075,uc001sqy.2_5end | ||
|cluster_id=chr12:62653903..62653959,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_FAM19A2_5end | |description=CAGE_peak_1_at_FAM19A2_5end | ||
|id=chr12:62653903..62653959,- | |id=chr12:62653903..62653959,- | ||
|ontology_enrichment_celltype=CL:0002087!4.85e-19!119;CL:0002032!7.12e-19!165;CL:0000837!7.12e-19!165;CL:0000037!1.02e-18!172;CL:0000566!1.02e-18!172;CL:0002057!1.95e-18!42;CL:0000988!2.16e-18!182;CL:0000738!1.07e-17!140;CL:0002031!3.55e-17!124;CL:0000860!1.45e-16!45;CL:0000766!9.34e-11!76;CL:0000763!2.36e-10!112;CL:0000049!2.36e-10!112;CL:0002194!3.70e-10!63;CL:0000576!3.70e-10!63;CL:0000040!3.70e-10!63;CL:0000559!3.70e-10!63;CL:0000839!6.33e-10!70;CL:0002009!2.53e-09!65;CL:0000542!5.52e-09!53;CL:0000051!5.52e-09!53;CL:0000557!9.64e-09!71;CL:0000838!1.08e-08!52;CL:0000945!5.31e-07!24;CL:0000826!5.31e-07!24 | |ontology_enrichment_celltype=CL:0002087!4.85e-19!119;CL:0002032!7.12e-19!165;CL:0000837!7.12e-19!165;CL:0000037!1.02e-18!172;CL:0000566!1.02e-18!172;CL:0002057!1.95e-18!42;CL:0000988!2.16e-18!182;CL:0000738!1.07e-17!140;CL:0002031!3.55e-17!124;CL:0000860!1.45e-16!45;CL:0000766!9.34e-11!76;CL:0000763!2.36e-10!112;CL:0000049!2.36e-10!112;CL:0002194!3.70e-10!63;CL:0000576!3.70e-10!63;CL:0000040!3.70e-10!63;CL:0000559!3.70e-10!63;CL:0000839!6.33e-10!70;CL:0002009!2.53e-09!65;CL:0000542!5.52e-09!53;CL:0000051!5.52e-09!53;CL:0000557!9.64e-09!71;CL:0000838!1.08e-08!52;CL:0000945!5.31e-07!24;CL:0000826!5.31e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.52e-32;33!CL:0002057;1.52e-32;33!CL:0000473;5.06e-22;39!CL:0000234;5.06e-22;39!CL:0000576;3.00e-19;48!CL:0002087;2.68e-13;104!CL:0000766;3.94e-11;69!CL:0000738;3.67e-09;136!CL:0000542;1.33e-08;53!CL:0000945;4.09e-08;24!CL:0000763;5.81e-08;100!CL:0000988;4.75e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,6.87e-35,115;CL:0002032,1.23e-33,161;CL:0000837,1.23e-33,161;CL:0002031,7.45e-33,120;CL:0000037,2.87e-32,168;CL:0000738,1.07e-30,136;CL:0000988,4.13e-30,177;CL:0000860,1.07e-29,42;CL:0002057,1.07e-29,42;CL:0000473,1.96e-24,48;CL:0000234,1.96e-24,48;CL:0002194,3.43e-22,59;CL:0000576,3.43e-22,59;CL:0000040,3.43e-22,59;CL:0000559,3.43e-22,59;CL:0002009,4.71e-21,61;CL:0000766,8.31e-21,72;CL:0000839,6.02e-20,66;CL:0000557,1.85e-19,67;CL:0000763,9.11e-19,108;CL:0000049,9.11e-19,108;CL:0000542,4.06e-14,53;CL:0000051,4.06e-14,53;CL:0000838,1.46e-13,52;CL:0000134,7.99e-09,354;CL:0000945,1.77e-08,24;CL:0000826,1.77e-08,24;CL:0002320,3.34e-08,361;CL:0000219,1.71e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;7.81e-22;42!CL:0000051;1.33e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:2531,9.63e-08,51;DOID:0060083,9.63e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.75e-12!102;UBERON:0003061!1.75e-12!102;UBERON:0002193!6.10e-12!112;UBERON:0002371!1.46e-07!80 | |ontology_enrichment_uberon=UBERON:0002390!1.75e-12!102;UBERON:0003061!1.75e-12!102;UBERON:0002193!6.10e-12!112;UBERON:0002371!1.46e-07!80 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.53e-22,98;UBERON:0003061,8.53e-22,98;UBERON:0002193,2.31e-19,108;UBERON:0002371,8.50e-17,76;UBERON:0001474,1.70e-15,82;UBERON:0002405,3.72e-15,93;UBERON:0004765,5.13e-13,90;UBERON:0001434,3.55e-11,100;UBERON:0002384,4.05e-08,371 | |||
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| ||
|short_description=p1@FAM19A2 | |short_description=p1@FAM19A2 | ||
}} | }} |
Latest revision as of 18:24, 19 September 2015
Short description: | p1@FAM19A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM19A2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000547941, ENST00000548541, ENST00000549379, ENST00000552075, uc001sqy.2_5end |
EntrezGene: | FAM19A2 |
HGNC: | 21589 |
UniProt: | F8VWB2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 6.87e-35 | 115 |
hematopoietic oligopotent progenitor cell | 1.23e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.23e-33 | 161 |
hematopoietic lineage restricted progenitor cell | 7.45e-33 | 120 |
hematopoietic stem cell | 2.87e-32 | 168 |
leukocyte | 1.07e-30 | 136 |
hematopoietic cell | 4.13e-30 | 177 |
classical monocyte | 1.07e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.07e-29 | 42 |
defensive cell | 1.96e-24 | 48 |
phagocyte | 1.96e-24 | 48 |
monopoietic cell | 3.43e-22 | 59 |
monocyte | 3.43e-22 | 59 |
monoblast | 3.43e-22 | 59 |
promonocyte | 3.43e-22 | 59 |
macrophage dendritic cell progenitor | 4.71e-21 | 61 |
myeloid leukocyte | 8.31e-21 | 72 |
myeloid lineage restricted progenitor cell | 6.02e-20 | 66 |
granulocyte monocyte progenitor cell | 1.85e-19 | 67 |
myeloid cell | 9.11e-19 | 108 |
common myeloid progenitor | 9.11e-19 | 108 |
lymphocyte | 4.06e-14 | 53 |
common lymphoid progenitor | 4.06e-14 | 53 |
lymphoid lineage restricted progenitor cell | 1.46e-13 | 52 |
mesenchymal cell | 7.99e-09 | 354 |
lymphocyte of B lineage | 1.77e-08 | 24 |
pro-B cell | 1.77e-08 | 24 |
connective tissue cell | 3.34e-08 | 361 |
motile cell | 1.71e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.53e-22 | 98 |
blood island | 8.53e-22 | 98 |
hemolymphoid system | 2.31e-19 | 108 |
bone marrow | 8.50e-17 | 76 |
bone element | 1.70e-15 | 82 |
immune system | 3.72e-15 | 93 |
skeletal element | 5.13e-13 | 90 |
skeletal system | 3.55e-11 | 100 |
connective tissue | 4.05e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.63e-08 | 51 |
immune system cancer | 9.63e-08 | 51 |