FFCP PHASE1:Hg19::chr17:46669606..46669628,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr17:46669606..46669628,+
|short_description=p1@LOC404266
|description=CAGE_peak_1_at_LOC404266_5end
|association_with_transcript=-25bp_to_NR_033203_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=404266 | |EntrezGene=404266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-25bp_to_NR_033203_5end | |||
|cluster_id=chr17:46669606..46669628,+ | |||
|description=CAGE_peak_1_at_LOC404266_5end | |||
|id=chr17:46669606..46669628,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.92e-14!12;CL:0000055!4.67e-10!180;CL:0000183!5.96e-09!59;CL:0000136!2.22e-08!15;CL:0000187!5.00e-08!54;CL:0000680!3.06e-07!57;CL:0000056!3.06e-07!57;CL:0000355!3.06e-07!57;CL:0000393!3.73e-07!60;CL:0000211!3.73e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.57e-16;12!CL:0002582;5.20e-09;3!CL:0002615;1.95e-08;3!CL:0002600;6.16e-07;2!CL:0002598;7.07e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,5.71e-16,12;CL:0002582,4.71e-09,3;CL:0002615,2.59e-08,3;CL:0000136,1.75e-07,15;CL:0000057,2.80e-07,76;CL:0002600,6.10e-07,2;CL:0002598,7.01e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;9.75e-09;3!UBERON:0003057;9.75e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.07e-14!216;UBERON:0009569!1.31e-10!113;UBERON:0004290!7.47e-09!70;UBERON:0000475!8.68e-09!365;UBERON:0005256!1.17e-08!143;UBERON:0003688!2.05e-08!6;UBERON:0002358!2.05e-08!6;UBERON:0003684!2.05e-08!6;UBERON:0001178!2.05e-08!6;UBERON:0000914!2.46e-07!83;UBERON:0002329!2.46e-07!83;UBERON:0003077!2.46e-07!83;UBERON:0003059!2.46e-07!83;UBERON:0007282!2.46e-07!83;UBERON:0009618!2.46e-07!83;UBERON:0007285!2.46e-07!83;UBERON:0002385!2.57e-07!63;UBERON:0001015!2.57e-07!63;UBERON:0000383!2.57e-07!63;UBERON:0005177!3.69e-07!107;UBERON:0001134!4.95e-07!61;UBERON:0002036!4.95e-07!61;UBERON:0003082!4.95e-07!61;UBERON:0002417!6.63e-07!61;UBERON:0000916!6.63e-07!61;UBERON:0003104!7.37e-07!238;UBERON:0009142!7.37e-07!238;UBERON:0001135!8.92e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;4.64e-11;6!UBERON:0002358;4.64e-11;6!UBERON:0003684;4.64e-11;6!UBERON:0001178;4.64e-11;6!UBERON:0006947;9.63e-09;3!UBERON:0004054;9.63e-09;3!UBERON:0002240;9.75e-09;3!UBERON:0005174;9.75e-09;3!UBERON:0001137;9.75e-09;3!UBERON:0002072;1.35e-08;5!UBERON:0004457;3.20e-07;9!UBERON:0000042;3.20e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.96e-11,6;UBERON:0002358,5.96e-11,6;UBERON:0003684,5.96e-11,6;UBERON:0001178,5.96e-11,6;UBERON:0006947,7.76e-09,3;UBERON:0004054,7.76e-09,3;UBERON:0002240,1.03e-08,3;UBERON:0005174,1.03e-08,3;UBERON:0001137,1.03e-08,3;UBERON:0002100,1.52e-08,199;UBERON:0002072,1.83e-08,5;UBERON:0005256,2.97e-08,122;UBERON:0009569,9.67e-08,112;UBERON:0002329,2.65e-07,71;UBERON:0003059,2.65e-07,71;UBERON:0007282,2.65e-07,71;UBERON:0004290,2.65e-07,71;UBERON:0009618,2.65e-07,71;UBERON:0003104,2.91e-07,160;UBERON:0009142,2.91e-07,160;UBERON:0007503,3.45e-07,78;UBERON:0003077,3.83e-07,72;UBERON:0007285,3.83e-07,72;UBERON:0007524,5.47e-07,73 | |||
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| ||
|short_description=p1@LOC404266 | |||
}} | }} |
Latest revision as of 07:06, 25 September 2015
Short description: | p1@LOC404266 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC404266_5end |
Coexpression cluster: | NA |
Association with transcript: | -25bp_to_NR_033203_5end |
EntrezGene: | LOC404266 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 5.71e-16 | 12 |
visceral preadipocyte | 4.71e-09 | 3 |
adipocyte of omentum tissue | 2.59e-08 | 3 |
fat cell | 1.75e-07 | 15 |
fibroblast | 2.80e-07 | 76 |
smooth muscle cell of trachea | 6.10e-07 | 2 |
bronchial smooth muscle cell | 7.01e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.96e-11 | 6 |
peritoneum | 5.96e-11 | 6 |
abdominal cavity | 5.96e-11 | 6 |
visceral peritoneum | 5.96e-11 | 6 |
male genital duct | 7.76e-09 | 3 |
internal male genitalia | 7.76e-09 | 3 |
spinal cord | 1.03e-08 | 3 |
dorsal region element | 1.03e-08 | 3 |
dorsum | 1.03e-08 | 3 |
trunk | 1.52e-08 | 199 |
hypodermis | 1.83e-08 | 5 |
trunk mesenchyme | 2.97e-08 | 122 |
subdivision of trunk | 9.67e-08 | 112 |
somite | 2.65e-07 | 71 |
presomitic mesoderm | 2.65e-07 | 71 |
presumptive segmental plate | 2.65e-07 | 71 |
dermomyotome | 2.65e-07 | 71 |
trunk paraxial mesoderm | 2.65e-07 | 71 |
mesenchyme | 2.91e-07 | 160 |
entire embryonic mesenchyme | 2.91e-07 | 160 |
epithelial vesicle | 3.45e-07 | 78 |
paraxial mesoderm | 3.83e-07 | 72 |
presumptive paraxial mesoderm | 3.83e-07 | 72 |
dense mesenchyme tissue | 5.47e-07 | 73 |