FFCP PHASE1:Hg19::chr16:420232..420237,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10573 | |EntrezGene=10573 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14484 | |HGNC=14484 | ||
|TSSclassifier=strong | |||
|UniProt=Q4TT38 | |UniProt=Q4TT38 | ||
|association_with_transcript=0bp_to_ENST00000397734,ENST00000469744,uc002cgr.1_5end | |association_with_transcript=0bp_to_ENST00000397734,ENST00000469744,uc002cgr.1_5end | ||
|cluster_id=chr16:420232..420237,- | |||
|description=CAGE_peak_2_at_MRPL28_5end | |description=CAGE_peak_2_at_MRPL28_5end | ||
|id=chr16:420232..420237,- | |id=chr16:420232..420237,- | ||
|ontology_enrichment_celltype=CL:0002321!4.92e-31!248;CL:0000220!2.79e-30!246;CL:0000066!3.29e-22!254;CL:0000222!2.99e-16!119;CL:0000548!3.07e-12!679;CL:0000004!3.07e-12!679;CL:0000255!3.07e-12!679;CL:0000393!4.99e-12!60;CL:0000211!4.99e-12!60;CL:0000183!1.98e-11!59;CL:0000012!2.33e-11!682;CL:0000192!4.74e-11!42;CL:0000514!4.74e-11!42;CL:0000187!2.35e-10!54;CL:0000680!2.44e-10!57;CL:0000056!2.44e-10!57;CL:0000355!2.44e-10!57;CL:0000076!8.65e-10!62;CL:0000055!1.71e-09!180;CL:0000359!1.89e-09!32;CL:0000221!5.54e-09!71;CL:0000144!4.45e-08!625;CL:0000213!1.12e-07!57;CL:0000215!1.12e-07!57;CL:0002371!3.00e-07!591 | |ontology_enrichment_celltype=CL:0002321!4.92e-31!248;CL:0000220!2.79e-30!246;CL:0000066!3.29e-22!254;CL:0000222!2.99e-16!119;CL:0000548!3.07e-12!679;CL:0000004!3.07e-12!679;CL:0000255!3.07e-12!679;CL:0000393!4.99e-12!60;CL:0000211!4.99e-12!60;CL:0000183!1.98e-11!59;CL:0000012!2.33e-11!682;CL:0000192!4.74e-11!42;CL:0000514!4.74e-11!42;CL:0000187!2.35e-10!54;CL:0000680!2.44e-10!57;CL:0000056!2.44e-10!57;CL:0000355!2.44e-10!57;CL:0000076!8.65e-10!62;CL:0000055!1.71e-09!180;CL:0000359!1.89e-09!32;CL:0000221!5.54e-09!71;CL:0000144!4.45e-08!625;CL:0000213!1.12e-07!57;CL:0000215!1.12e-07!57;CL:0002371!3.00e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.35e-08;32!CL:0000192;3.57e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.83e-32,250;CL:0000066,3.21e-22,253;CL:0000222,9.08e-17,121;CL:0000393,2.51e-12,61;CL:0000211,2.51e-12,61;CL:0000192,2.28e-11,43;CL:0000514,2.28e-11,43;CL:0000187,1.24e-10,55;CL:0000680,1.29e-10,58;CL:0000056,1.29e-10,58;CL:0000355,1.29e-10,58;CL:0000076,5.71e-10,63;CL:0000359,1.57e-09,32;CL:0000221,7.48e-09,72;CL:0000213,1.01e-07,58;CL:0000215,1.01e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;3.57e-08;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000483!8.33e-14!309;UBERON:0000119!1.17e-13!312;UBERON:0002049!3.52e-13!79;UBERON:0007798!3.52e-13!79;UBERON:0003914!1.51e-12!118;UBERON:0002100!3.61e-11!216;UBERON:0004872!3.70e-11!84;UBERON:0005256!3.89e-11!143;UBERON:0000490!4.25e-11!138;UBERON:0000055!1.67e-10!69;UBERON:0000486!1.89e-10!82;UBERON:0001981!7.36e-10!60;UBERON:0007500!7.36e-10!60;UBERON:0004537!7.36e-10!60;UBERON:0006965!7.36e-10!60;UBERON:0001637!8.88e-10!42;UBERON:0003509!8.88e-10!42;UBERON:0004572!8.88e-10!42;UBERON:0004535!1.07e-09!110;UBERON:0001009!1.42e-09!113;UBERON:0001134!1.27e-08!61;UBERON:0002036!1.27e-08!61;UBERON:0003082!1.27e-08!61;UBERON:0004290!1.41e-08!70;UBERON:0003104!1.71e-08!238;UBERON:0009142!1.71e-08!238;UBERON:0000914!2.32e-08!83;UBERON:0002329!2.32e-08!83;UBERON:0003077!2.32e-08!83;UBERON:0003059!2.32e-08!83;UBERON:0007282!2.32e-08!83;UBERON:0009618!2.32e-08!83;UBERON:0007285!2.32e-08!83;UBERON:0000475!4.06e-08!365;UBERON:0000481!4.68e-08!347;UBERON:0002385!7.97e-08!63;UBERON:0001015!7.97e-08!63;UBERON:0000383!7.97e-08!63 | |ontology_enrichment_uberon=UBERON:0000483!8.33e-14!309;UBERON:0000119!1.17e-13!312;UBERON:0002049!3.52e-13!79;UBERON:0007798!3.52e-13!79;UBERON:0003914!1.51e-12!118;UBERON:0002100!3.61e-11!216;UBERON:0004872!3.70e-11!84;UBERON:0005256!3.89e-11!143;UBERON:0000490!4.25e-11!138;UBERON:0000055!1.67e-10!69;UBERON:0000486!1.89e-10!82;UBERON:0001981!7.36e-10!60;UBERON:0007500!7.36e-10!60;UBERON:0004537!7.36e-10!60;UBERON:0006965!7.36e-10!60;UBERON:0001637!8.88e-10!42;UBERON:0003509!8.88e-10!42;UBERON:0004572!8.88e-10!42;UBERON:0004535!1.07e-09!110;UBERON:0001009!1.42e-09!113;UBERON:0001134!1.27e-08!61;UBERON:0002036!1.27e-08!61;UBERON:0003082!1.27e-08!61;UBERON:0004290!1.41e-08!70;UBERON:0003104!1.71e-08!238;UBERON:0009142!1.71e-08!238;UBERON:0000914!2.32e-08!83;UBERON:0002329!2.32e-08!83;UBERON:0003077!2.32e-08!83;UBERON:0003059!2.32e-08!83;UBERON:0007282!2.32e-08!83;UBERON:0009618!2.32e-08!83;UBERON:0007285!2.32e-08!83;UBERON:0000475!4.06e-08!365;UBERON:0000481!4.68e-08!347;UBERON:0002385!7.97e-08!63;UBERON:0001015!7.97e-08!63;UBERON:0000383!7.97e-08!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0006554;2.50e-07;30!UBERON:0001008;2.50e-07;30!UBERON:0002113;3.41e-07;24!UBERON:0011143;3.41e-07;24!UBERON:0002049;3.51e-07;75!UBERON:0007798;3.51e-07;75!UBERON:0003914;3.94e-07;74!UBERON:0010371;5.37e-07;31!UBERON:0001637;5.70e-07;42!UBERON:0003509;5.70e-07;42!UBERON:0004572;5.70e-07;42!UBERON:0007500;6.55e-07;56!UBERON:0001981;6.55e-07;56!UBERON:0004537;6.55e-07;56 | |||
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| ||
|short_description=p2@MRPL28 | |short_description=p2@MRPL28 | ||
}} | }} |
Latest revision as of 15:45, 16 September 2015
Short description: | p2@MRPL28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MRPL28_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397734, ENST00000469744, uc002cgr.1_5end |
EntrezGene: | MRPL28 |
HGNC: | 14484 |
UniProt: | Q4TT38 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.83e-32 | 250 |
epithelial cell | 3.21e-22 | 253 |
mesodermal cell | 9.08e-17 | 121 |
electrically responsive cell | 2.51e-12 | 61 |
electrically active cell | 2.51e-12 | 61 |
smooth muscle cell | 2.28e-11 | 43 |
smooth muscle myoblast | 2.28e-11 | 43 |
muscle cell | 1.24e-10 | 55 |
muscle precursor cell | 1.29e-10 | 58 |
myoblast | 1.29e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.29e-10 | 58 |
squamous epithelial cell | 5.71e-10 | 63 |
vascular associated smooth muscle cell | 1.57e-09 | 32 |
ectodermal cell | 7.48e-09 | 72 |
lining cell | 1.01e-07 | 58 |
barrier cell | 1.01e-07 | 58 |