FFCP PHASE1:Hg19::chr1:224622543..224622610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149111 | |EntrezGene=149111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26802 | |HGNC=26802 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000483512,uc001hor.1_5end | |association_with_transcript=-3bp_to_ENST00000483512,uc001hor.1_5end | ||
|cluster_id=chr1:224622543..224622610,+ | |||
|description=CAGE_peak_3_at_CNIH3_5end | |description=CAGE_peak_3_at_CNIH3_5end | ||
|id=chr1:224622543..224622610,+ | |id=chr1:224622543..224622610,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-19!115;UBERON:0001049!3.25e-15!57;UBERON:0005068!3.25e-15!57;UBERON:0006241!3.25e-15!57;UBERON:0007135!3.25e-15!57;UBERON:0000955!5.94e-14!69;UBERON:0006238!5.94e-14!69;UBERON:0002616!2.84e-13!59;UBERON:0003080!4.23e-13!42;UBERON:0002780!8.20e-13!41;UBERON:0001890!8.20e-13!41;UBERON:0006240!8.20e-13!41;UBERON:0001017!3.07e-11!82;UBERON:0005743!1.44e-10!86;UBERON:0002020!1.64e-10!34;UBERON:0003528!1.64e-10!34;UBERON:0001893!1.69e-10!34;UBERON:0003075!2.19e-10!86;UBERON:0007284!2.19e-10!86;UBERON:0002346!2.49e-10!90;UBERON:0000073!3.26e-10!94;UBERON:0001016!3.26e-10!94;UBERON:0002791!3.55e-10!33;UBERON:0001869!1.70e-09!32;UBERON:0000153!6.13e-09!129;UBERON:0007811!6.13e-09!129;UBERON:0000033!2.86e-08!123;UBERON:0003056!3.59e-08!61;UBERON:0002619!6.44e-08!22;UBERON:0000956!1.84e-07!25;UBERON:0000203!1.84e-07!25;UBERON:0001950!4.66e-07!20 | |ontology_enrichment_uberon=UBERON:0007023!1.25e-19!115;UBERON:0001049!3.25e-15!57;UBERON:0005068!3.25e-15!57;UBERON:0006241!3.25e-15!57;UBERON:0007135!3.25e-15!57;UBERON:0000955!5.94e-14!69;UBERON:0006238!5.94e-14!69;UBERON:0002616!2.84e-13!59;UBERON:0003080!4.23e-13!42;UBERON:0002780!8.20e-13!41;UBERON:0001890!8.20e-13!41;UBERON:0006240!8.20e-13!41;UBERON:0001017!3.07e-11!82;UBERON:0005743!1.44e-10!86;UBERON:0002020!1.64e-10!34;UBERON:0003528!1.64e-10!34;UBERON:0001893!1.69e-10!34;UBERON:0003075!2.19e-10!86;UBERON:0007284!2.19e-10!86;UBERON:0002346!2.49e-10!90;UBERON:0000073!3.26e-10!94;UBERON:0001016!3.26e-10!94;UBERON:0002791!3.55e-10!33;UBERON:0001869!1.70e-09!32;UBERON:0000153!6.13e-09!129;UBERON:0007811!6.13e-09!129;UBERON:0000033!2.86e-08!123;UBERON:0003056!3.59e-08!61;UBERON:0002619!6.44e-08!22;UBERON:0000956!1.84e-07!25;UBERON:0000203!1.84e-07!25;UBERON:0001950!4.66e-07!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.33e-10;53!UBERON:0002616;3.33e-10;53!UBERON:0002780;5.17e-10;41!UBERON:0001890;5.17e-10;41!UBERON:0001893;6.11e-08;34!UBERON:0003528;8.47e-08;34!UBERON:0002020;8.47e-08;34!UBERON:0002791;1.06e-07;32!UBERON:0002619;1.21e-07;22!UBERON:0000922;1.92e-07;49!UBERON:0001869;3.36e-07;32!UBERON:0000955;6.19e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.51e-20,114;UBERON:0001049,1.45e-17,56;UBERON:0005068,1.45e-17,56;UBERON:0006241,1.45e-17,56;UBERON:0007135,1.45e-17,56;UBERON:0000073,3.48e-17,53;UBERON:0002616,3.48e-17,53;UBERON:0000955,3.07e-15,68;UBERON:0006238,3.07e-15,68;UBERON:0002780,3.87e-14,41;UBERON:0001890,3.87e-14,41;UBERON:0003080,3.87e-14,41;UBERON:0006240,3.87e-14,41;UBERON:0001016,1.22e-12,89;UBERON:0001017,1.57e-12,81;UBERON:0002346,4.88e-12,86;UBERON:0003075,1.49e-11,82;UBERON:0007284,1.49e-11,82;UBERON:0003528,2.24e-10,34;UBERON:0002020,2.24e-10,34;UBERON:0001893,2.32e-10,34;UBERON:0002791,2.51e-09,32;UBERON:0001869,4.74e-09,32;UBERON:0002619,9.11e-09,22;UBERON:0003056,5.43e-08,61;UBERON:0010371,1.35e-07,104;UBERON:0001950,1.42e-07,20;UBERON:0000956,4.46e-07,25;UBERON:0000203,4.46e-07,25 | |||
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| ||
|short_description=p3@CNIH3 | |short_description=p3@CNIH3 | ||
}} | }} |
Latest revision as of 23:27, 15 September 2015
Short description: | p3@CNIH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CNIH3_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000483512, uc001hor.1_5end |
EntrezGene: | CNIH3 |
HGNC: | 26802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.51e-20 | 114 |
neural tube | 1.45e-17 | 56 |
neural rod | 1.45e-17 | 56 |
future spinal cord | 1.45e-17 | 56 |
neural keel | 1.45e-17 | 56 |
regional part of nervous system | 3.48e-17 | 53 |
regional part of brain | 3.48e-17 | 53 |
brain | 3.07e-15 | 68 |
future brain | 3.07e-15 | 68 |
regional part of forebrain | 3.87e-14 | 41 |
forebrain | 3.87e-14 | 41 |
anterior neural tube | 3.87e-14 | 41 |
future forebrain | 3.87e-14 | 41 |
nervous system | 1.22e-12 | 89 |
central nervous system | 1.57e-12 | 81 |
neurectoderm | 4.88e-12 | 86 |
neural plate | 1.49e-11 | 82 |
presumptive neural plate | 1.49e-11 | 82 |
brain grey matter | 2.24e-10 | 34 |
gray matter | 2.24e-10 | 34 |
telencephalon | 2.32e-10 | 34 |
regional part of telencephalon | 2.51e-09 | 32 |
cerebral hemisphere | 4.74e-09 | 32 |
regional part of cerebral cortex | 9.11e-09 | 22 |
pre-chordal neural plate | 5.43e-08 | 61 |
ecto-epithelium | 1.35e-07 | 104 |
neocortex | 1.42e-07 | 20 |
cerebral cortex | 4.46e-07 | 25 |
pallium | 4.46e-07 | 25 |