FFCP PHASE1:Hg19::chr2:30370714..30370740,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51646 | |EntrezGene=51646 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18329 | |HGNC=18329 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-77bp_to_ENST00000470120_5end | |association_with_transcript=-77bp_to_ENST00000470120_5end | ||
|cluster_id=chr2:30370714..30370740,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_7_at_YPEL5_5end | |description=CAGE_peak_7_at_YPEL5_5end | ||
|id=chr2:30370714..30370740,+ | |id=chr2:30370714..30370740,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.72e-17!140;CL:0000037!1.14e-11!172;CL:0000566!1.14e-11!172;CL:0000988!6.31e-11!182;CL:0002087!1.41e-09!119;CL:0002031!2.05e-09!124;CL:0000766!2.37e-09!76;CL:0002032!6.33e-09!165;CL:0000837!6.33e-09!165;CL:0000094!1.20e-08!8;CL:0000623!3.84e-07!3;CL:0000825!3.84e-07!3;CL:0000775!6.06e-07!3;CL:0000842!7.87e-07!3 | |ontology_enrichment_celltype=CL:0000738!1.72e-17!140;CL:0000037!1.14e-11!172;CL:0000566!1.14e-11!172;CL:0000988!6.31e-11!182;CL:0002087!1.41e-09!119;CL:0002031!2.05e-09!124;CL:0000766!2.37e-09!76;CL:0002032!6.33e-09!165;CL:0000837!6.33e-09!165;CL:0000094!1.20e-08!8;CL:0000623!3.84e-07!3;CL:0000825!3.84e-07!3;CL:0000775!6.06e-07!3;CL:0000842!7.87e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000623;9.15e-27;3!CL:0000775;8.06e-26;3!CL:0000226;3.65e-25;3!CL:0000842;3.65e-25;3!CL:0000094;4.84e-17;8!CL:0000791;1.84e-16;18!CL:0000789;1.84e-16;18!CL:0002419;1.84e-16;18!CL:0000624;4.98e-13;6!CL:0000081;1.88e-12;11!CL:0000084;9.99e-12;25!CL:0000542;1.26e-10;53!CL:0000625;1.31e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,9.56e-27,3;CL:0000825,9.56e-27,3;CL:0000775,7.41e-26,3;CL:0000226,2.41e-25,3;CL:0000842,2.41e-25,3;CL:0000738,3.55e-21,136;CL:0000838,5.88e-18,52;CL:0000542,1.39e-17,53;CL:0000051,1.39e-17,53;CL:0000094,4.65e-17,8;CL:0000037,1.56e-16,168;CL:0000791,1.91e-16,18;CL:0000789,1.91e-16,18;CL:0002420,1.91e-16,18;CL:0002419,1.91e-16,18;CL:0000790,1.91e-16,18;CL:0000988,1.58e-15,177;CL:0000624,5.52e-13,6;CL:0000081,1.82e-12,11;CL:0002087,8.50e-12,115;CL:0000084,1.03e-11,25;CL:0000827,1.03e-11,25;CL:0002032,1.65e-10,161;CL:0000837,1.65e-10,161;CL:0002031,5.14e-08,120;CL:0000625,1.28e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.84e-16;18!CL:0000051;1.26e-10;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.72e-07!102;UBERON:0003061!6.72e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!6.72e-07!102;UBERON:0003061!6.72e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002171;1.83e-09;1!UBERON:0006518;1.83e-09;1!UBERON:0008949;1.83e-09;1!UBERON:0000101;1.83e-09;1!UBERON:0002167;1.83e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,1.91e-09,1;UBERON:0006518,1.91e-09,1;UBERON:0008949,1.91e-09,1;UBERON:0000101,1.91e-09,1;UBERON:0002167,1.91e-09,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,2.84606484554724,0.587237189370939,3.44045905312706,0,0,0,1.180258620683,2.35806457649499,2.67281948699362,0,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0,0,0,0,0,0,6.45141578319144,7.75576567772171,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,1.15295962733569,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88123040807709,7.54696512008311,7.05886699538616,0,0,0,0,0,1.49801404789436,5.9832291840805,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.6541442089831,2.37285620900479,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.269272933229316,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0,0.227336094654718,0.267964130156178,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.928896739896456,0,0,0,0,0,0,0,0.601633342410425,0.434021741431704,0,0.32389366601898,0.257575567634187,0.436194716338694,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0,0.22465726229299,0.150176892841506,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0.400395987036012,0.574752439954483,0,0,2.84606484554724,0.587237189370939,3.44045905312706,0,0,0,1.180258620683,2.35806457649499,2.67281948699362,0,0,0,1.94826728407911,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0.296573126324121,0.267540828089713,1.04535523804977,0,0.383220493601921,0.34362744548263,1.26509846009751,0,0,0,0,0,0,0,0,6.45141578319144,7.75576567772171,4.48955652036677,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0.132957960518865,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0.352193736052904,0.207328115540772,1.15295962733569,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.88123040807709,7.54696512008311,7.05886699538616,0,0,0,0,0,1.49801404789436,5.9832291840805,4.14415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,1.6541442089831,2.37285620900479,1.60091336705167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0.269272933229316,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0,0.391102765469606,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0984274815147488,0,0,0.136203406111576,0,0.137539436597234,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24271716604159,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0.159633859057151,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.235479278551542,0,0,0,0,0,0,0,0,0,0,0,0.51215543128185,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0.281951753939561,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.275684698604535,0,0.227336094654718,0.267964130156178,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p7@YPEL5 | |short_description=p7@YPEL5 | ||
}} | }} |
Latest revision as of 21:46, 16 September 2015
Short description: | p7@YPEL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_YPEL5_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -77bp_to_ENST00000470120_5end |
EntrezGene: | YPEL5 |
HGNC: | 18329 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 9.56e-27 | 3 |
pro-NK cell | 9.56e-27 | 3 |
neutrophil | 7.41e-26 | 3 |
single nucleate cell | 2.41e-25 | 3 |
mononuclear cell | 2.41e-25 | 3 |
leukocyte | 3.55e-21 | 136 |
lymphoid lineage restricted progenitor cell | 5.88e-18 | 52 |
lymphocyte | 1.39e-17 | 53 |
common lymphoid progenitor | 1.39e-17 | 53 |
granulocyte | 4.65e-17 | 8 |
hematopoietic stem cell | 1.56e-16 | 168 |
mature alpha-beta T cell | 1.91e-16 | 18 |
alpha-beta T cell | 1.91e-16 | 18 |
immature T cell | 1.91e-16 | 18 |
mature T cell | 1.91e-16 | 18 |
immature alpha-beta T cell | 1.91e-16 | 18 |
hematopoietic cell | 1.58e-15 | 177 |
CD4-positive, alpha-beta T cell | 5.52e-13 | 6 |
blood cell | 1.82e-12 | 11 |
nongranular leukocyte | 8.50e-12 | 115 |
T cell | 1.03e-11 | 25 |
pro-T cell | 1.03e-11 | 25 |
hematopoietic oligopotent progenitor cell | 1.65e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-10 | 161 |
hematopoietic lineage restricted progenitor cell | 5.14e-08 | 120 |
CD8-positive, alpha-beta T cell | 1.28e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 1.91e-09 | 1 |
right lung lobe | 1.91e-09 | 1 |
lower lobe of lung | 1.91e-09 | 1 |
lobe of lung | 1.91e-09 | 1 |
right lung | 1.91e-09 | 1 |