FFCP PHASE1:Hg19::chr12:121972489..121972509,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84678 | |EntrezGene=84678 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13610 | |HGNC=13610 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6N6 | |UniProt=F5H6N6 | ||
|association_with_transcript=55bp_to_ENST00000545022_5end | |association_with_transcript=55bp_to_ENST00000545022_5end | ||
|cluster_id=chr12:121972489..121972509,- | |||
|coexpression_cluster_id=C61 | |coexpression_cluster_id=C61 | ||
|description=CAGE_peak_14_at_KDM2B_5end | |description=CAGE_peak_14_at_KDM2B_5end | ||
|id=chr12:121972489..121972509,- | |id=chr12:121972489..121972509,- | ||
|ontology_enrichment_celltype=CL:0000738!1.21e-20!140;CL:0000542!2.12e-20!53;CL:0000051!2.12e-20!53;CL:0000838!6.02e-19!52;CL:0002087!7.45e-18!119;CL:0000988!4.29e-16!182;CL:0000037!1.38e-14!172;CL:0000566!1.38e-14!172;CL:0000080!2.64e-14!6;CL:0002031!1.69e-13!124;CL:0002032!6.84e-13!165;CL:0000837!6.84e-13!165;CL:0000990!1.97e-12!8;CL:0000945!2.89e-10!24;CL:0000826!2.89e-10!24;CL:0000451!6.07e-10!10;CL:0000453!6.43e-09!5;CL:0000623!5.85e-08!3;CL:0000825!5.85e-08!3;CL:0000842!1.68e-07!3;CL:0000624!8.18e-07!6 | |ontology_enrichment_celltype=CL:0000738!1.21e-20!140;CL:0000542!2.12e-20!53;CL:0000051!2.12e-20!53;CL:0000838!6.02e-19!52;CL:0002087!7.45e-18!119;CL:0000988!4.29e-16!182;CL:0000037!1.38e-14!172;CL:0000566!1.38e-14!172;CL:0000080!2.64e-14!6;CL:0002031!1.69e-13!124;CL:0002032!6.84e-13!165;CL:0000837!6.84e-13!165;CL:0000990!1.97e-12!8;CL:0000945!2.89e-10!24;CL:0000826!2.89e-10!24;CL:0000451!6.07e-10!10;CL:0000453!6.43e-09!5;CL:0000623!5.85e-08!3;CL:0000825!5.85e-08!3;CL:0000842!1.68e-07!3;CL:0000624!8.18e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000453;2.19e-24;5!CL:0000945;4.76e-18;24!CL:0000542;1.06e-16;53!CL:0000791;1.23e-13;18!CL:0000789;1.23e-13;18!CL:0002419;1.23e-13;18!CL:0000990;1.23e-13;8!CL:0000084;5.15e-13;25!CL:0000451;3.52e-11;10!CL:0000624;4.27e-11;6!CL:0002087;1.21e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.34e-35,53;CL:0000051,2.34e-35,53;CL:0000838,8.20e-32,52;CL:0000453,2.20e-24,5;CL:0000738,2.93e-21,136;CL:0000988,7.11e-21,177;CL:0000945,4.94e-18,24;CL:0000826,4.94e-18,24;CL:0000037,1.82e-16,168;CL:0002087,2.60e-16,115;CL:0002032,1.28e-15,161;CL:0000837,1.28e-15,161;CL:0002031,1.02e-13,120;CL:0000791,1.07e-13,18;CL:0000789,1.07e-13,18;CL:0002420,1.07e-13,18;CL:0002419,1.07e-13,18;CL:0000790,1.07e-13,18;CL:0000990,1.24e-13,8;CL:0000084,4.23e-13,25;CL:0000827,4.23e-13,25;CL:0000624,2.85e-11,6;CL:0000451,3.52e-11,10 | |||
|ontology_enrichment_development_v019=CL:0000051;1.06e-16;53!CL:0000790;1.23e-13;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;8.77e-09;1!DOID:0050177;8.77e-09;1!DOID:0050427;8.77e-09;1!DOID:12603;2.37e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,8.78e-09,1;DOID:0050177,8.78e-09,1;DOID:0050427,8.78e-09,1;DOID:12603,1.98e-08,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.60e-08;15!UBERON:0000179;8.60e-08;15!UBERON:0000463;8.60e-08;15!UBERON:0002331;5.43e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.61e-08,15;UBERON:0000179,8.61e-08,15;UBERON:0000463,8.61e-08,15;UBERON:0002331,4.75e-07,10;UBERON:0000358,4.75e-07,10;UBERON:0000307,4.75e-07,10;UBERON:0000091,4.75e-07,10;UBERON:0000087,4.75e-07,10;UBERON:0007010,4.75e-07,10;UBERON:0007806,4.75e-07,10;UBERON:0008780,4.75e-07,10;UBERON:0005728,4.75e-07,10 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.47781061009902,1.49550484495991,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,7.04684627245127,2.29363936875137,0,1.12101712596307,0,1.96709770113833,1.96505381374582,1.23360899399706,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0,0,0.25618263945135,0.650296737799391,0.164437904603676,0,0,0,0,0,0,0,0,0.759059076058509,0,0,0,0,0,0,0,0,1.20964045934839,2.40696176205157,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.09244169283818,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,7.11650708833493,1.35920332841153,1.8795950910982,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,6.74921674654501,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0.197611631897944,1.33971858218986,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9014499574207,18.9996721648109,21.2635012532597,0,0,0,0.59996218756479,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.580120991762195,3.0981758336728,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0.23806443146374,0.452122368852043,0.248298857183432,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.805095174364105,4.16739039994203 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|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.47781061009902,1.49550484495991,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,7.04684627245127,2.29363936875137,0,1.12101712596307,0,1.96709770113833,1.96505381374582,1.23360899399706,0.167186495390678,0.32592226663359,0,0,0.557052284425868,0,0,0,0.25618263945135,0.650296737799391,0.164437904603676,0,0,0,0,0,0,0,0,0.759059076058509,0,0,0,0,0,0,0,0,1.20964045934839,2.40696176205157,1.30341963494519,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788123040807709,0.646882724578552,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,1.07857100409308,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,1.48642540100575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,2.09244169283818,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,7.11650708833493,1.35920332841153,1.8795950910982,0,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,6.74921674654501,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0.414239055347196,0,0.197611631897944,1.33971858218986,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9014499574207,18.9996721648109,21.2635012532597,0,0,0,0.59996218756479,0,0,0,0,0,2.48830904013189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.580120991762195,3.0981758336728,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0.23806443146374,0.452122368852043,0.248298857183432,0,0,0,0,0,0.336760265072938,0,0,0,0,0,0,0,0,0,0,0.805095174364105,4.16739039994203 | ||
|short_description=p14@KDM2B | |short_description=p14@KDM2B | ||
}} | }} |
Latest revision as of 22:02, 16 September 2015
Short description: | p14@KDM2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KDM2B_5end |
Coexpression cluster: | C61_migratory_Dendritic_immature_Macrophage_xeroderma_cord_b |
Association with transcript: | 55bp_to_ENST00000545022_5end |
EntrezGene: | KDM2B |
HGNC: | 13610 |
UniProt: | F5H6N6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.34e-35 | 53 |
common lymphoid progenitor | 2.34e-35 | 53 |
lymphoid lineage restricted progenitor cell | 8.20e-32 | 52 |
Langerhans cell | 2.20e-24 | 5 |
leukocyte | 2.93e-21 | 136 |
hematopoietic cell | 7.11e-21 | 177 |
lymphocyte of B lineage | 4.94e-18 | 24 |
pro-B cell | 4.94e-18 | 24 |
hematopoietic stem cell | 1.82e-16 | 168 |
nongranular leukocyte | 2.60e-16 | 115 |
hematopoietic oligopotent progenitor cell | 1.28e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.28e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 1.02e-13 | 120 |
mature alpha-beta T cell | 1.07e-13 | 18 |
alpha-beta T cell | 1.07e-13 | 18 |
immature T cell | 1.07e-13 | 18 |
mature T cell | 1.07e-13 | 18 |
immature alpha-beta T cell | 1.07e-13 | 18 |
conventional dendritic cell | 1.24e-13 | 8 |
T cell | 4.23e-13 | 25 |
pro-T cell | 4.23e-13 | 25 |
CD4-positive, alpha-beta T cell | 2.85e-11 | 6 |
dendritic cell | 3.52e-11 | 10 |
Ontology term | p-value | n |
---|---|---|
blood | 8.61e-08 | 15 |
haemolymphatic fluid | 8.61e-08 | 15 |
organism substance | 8.61e-08 | 15 |
umbilical cord | 4.75e-07 | 10 |
blastocyst | 4.75e-07 | 10 |
blastula | 4.75e-07 | 10 |
bilaminar disc | 4.75e-07 | 10 |
inner cell mass | 4.75e-07 | 10 |
cleaving embryo | 4.75e-07 | 10 |
connecting stalk | 4.75e-07 | 10 |
inner cell mass derived epiblast | 4.75e-07 | 10 |
extraembryonic mesoderm | 4.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 8.78e-09 | 1 |
monogenic disease | 8.78e-09 | 1 |
xeroderma pigmentosum | 8.78e-09 | 1 |
acute leukemia | 1.98e-08 | 1 |