FFCP PHASE1:Hg19::chr17:8064108..8064167,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:8064108..8064167,-
|short_description=p2@VAMP2
|description=CAGE_peak_2_at_VAMP2_5end
|association_with_transcript=-161bp_to_AL050223_5end
|EntrezGene=68...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6844 | |EntrezGene=6844 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=12643 | |HGNC=12643 | ||
|TSSclassifier=strong | |||
|UniProt=Q69Z01 | |UniProt=Q69Z01 | ||
|association_with_transcript=-161bp_to_AL050223_5end | |||
|cluster_id=chr17:8064108..8064167,- | |||
|coexpression_cluster_id=C317 | |||
|description=CAGE_peak_2_at_VAMP2_5end | |||
|id=chr17:8064108..8064167,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.10e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.88e-39!115;UBERON:0001049!4.64e-28!57;UBERON:0005068!4.64e-28!57;UBERON:0006241!4.64e-28!57;UBERON:0007135!4.64e-28!57;UBERON:0001017!1.03e-24!82;UBERON:0005743!1.40e-24!86;UBERON:0000073!1.71e-23!94;UBERON:0001016!1.71e-23!94;UBERON:0002346!1.89e-22!90;UBERON:0000955!4.12e-22!69;UBERON:0006238!4.12e-22!69;UBERON:0003080!4.85e-22!42;UBERON:0002780!7.76e-22!41;UBERON:0001890!7.76e-22!41;UBERON:0006240!7.76e-22!41;UBERON:0002616!1.32e-21!59;UBERON:0003075!1.42e-21!86;UBERON:0007284!1.42e-21!86;UBERON:0001893!6.74e-18!34;UBERON:0002020!7.61e-18!34;UBERON:0003528!7.61e-18!34;UBERON:0002791!3.03e-17!33;UBERON:0001869!8.43e-17!32;UBERON:0002619!7.98e-16!22;UBERON:0000924!9.01e-16!173;UBERON:0006601!9.01e-16!173;UBERON:0003056!9.77e-16!61;UBERON:0000153!4.55e-15!129;UBERON:0007811!4.55e-15!129;UBERON:0004121!5.82e-15!169;UBERON:0001950!1.32e-14!20;UBERON:0000033!3.05e-14!123;UBERON:0000956!5.64e-13!25;UBERON:0000203!5.64e-13!25;UBERON:0003076!3.20e-07!15;UBERON:0003057!3.20e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.52e-16;22!UBERON:0002780;2.81e-16;41!UBERON:0001890;2.81e-16;41!UBERON:0001893;1.43e-15;34!UBERON:0003528;1.59e-15;34!UBERON:0002020;1.59e-15;34!UBERON:0001869;2.07e-15;32!UBERON:0002791;2.57e-15;32!UBERON:0000073;3.11e-15;53!UBERON:0002616;3.11e-15;53!UBERON:0001950;4.63e-15;20!UBERON:0000956;3.67e-13;25!UBERON:0000203;3.67e-13;25!UBERON:0007023;2.78e-11;114!UBERON:0001017;8.49e-11;75!UBERON:0000955;1.54e-10;68!UBERON:0001016;2.26e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.38e-39,114;UBERON:0001049,5.34e-28,56;UBERON:0005068,5.34e-28,56;UBERON:0006241,5.34e-28,56;UBERON:0007135,5.34e-28,56;UBERON:0000073,2.20e-26,53;UBERON:0002616,2.20e-26,53;UBERON:0001017,1.19e-24,81;UBERON:0001016,2.72e-23,89;UBERON:0002346,2.27e-22,86;UBERON:0000955,5.04e-22,68;UBERON:0006238,5.04e-22,68;UBERON:0002780,6.43e-22,41;UBERON:0001890,6.43e-22,41;UBERON:0003080,6.43e-22,41;UBERON:0006240,6.43e-22,41;UBERON:0003075,1.73e-21,82;UBERON:0007284,1.73e-21,82;UBERON:0001893,6.23e-18,34;UBERON:0003528,7.04e-18,34;UBERON:0002020,7.04e-18,34;UBERON:0001869,8.03e-17,32;UBERON:0002791,1.01e-16,32;UBERON:0004121,4.44e-16,171;UBERON:0000924,4.44e-16,171;UBERON:0006601,4.44e-16,171;UBERON:0002619,5.24e-16,22;UBERON:0003056,7.26e-16,61;UBERON:0010371,8.25e-15,104;UBERON:0001950,8.99e-15,20;UBERON:0000956,5.95e-13,25;UBERON:0000203,5.95e-13,25;UBERON:0010314,4.99e-12,132;UBERON:0011216,3.41e-11,223;UBERON:0003076,2.71e-07,15;UBERON:0003057,2.71e-07,15 | |||
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| ||
|short_description=p2@VAMP2 | |||
}} | }} |
Latest revision as of 13:37, 18 September 2015
Short description: | p2@VAMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_VAMP2_5end |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | -161bp_to_AL050223_5end |
EntrezGene: | VAMP2 |
HGNC: | 12643 |
UniProt: | Q69Z01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data