FFCP PHASE1:Hg19::chr12:16505568..16505582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:16505568..16505582,- | |||
|coexpression_cluster_id=C91 | |coexpression_cluster_id=C91 | ||
|description=CAGE_peak_at_chr12:16505568..16505582,- | |description=CAGE_peak_at_chr12:16505568..16505582,- | ||
|id=chr12:16505568..16505582,- | |id=chr12:16505568..16505582,- | ||
|ontology_enrichment_celltype=CL:0002620!6.34e-12!23;CL:0000057!9.95e-12!75;CL:0002580!3.03e-09!3;CL:0000055!3.43e-08!180;CL:0000144!1.22e-07!625;CL:1000306!2.18e-07!4;CL:0002547!2.18e-07!4;CL:0002334!2.88e-07!12;CL:0000548!8.90e-07!679;CL:0000004!8.90e-07!679;CL:0000255!8.90e-07!679 | |ontology_enrichment_celltype=CL:0002620!6.34e-12!23;CL:0000057!9.95e-12!75;CL:0002580!3.03e-09!3;CL:0000055!3.43e-08!180;CL:0000144!1.22e-07!625;CL:1000306!2.18e-07!4;CL:0002547!2.18e-07!4;CL:0002334!2.88e-07!12;CL:0000548!8.90e-07!679;CL:0000004!8.90e-07!679;CL:0000255!8.90e-07!679 | ||
|ontology_enrichment_celltype_v019=CL:1000306;2.26e-19;4!CL:0002547;2.26e-19;4!CL:0000511;2.71e-19;1!CL:0002625;2.71e-19;1!CL:0000216;2.71e-19;1!CL:0002620;1.16e-07;23!CL:0000322;2.63e-07;3!CL:0002580;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.56e-19,1;CL:0002625,1.56e-19,1;CL:0000216,1.56e-19,1;CL:1000306,2.26e-19,4;CL:0002547,2.26e-19,4;CL:0000057,2.00e-08,76;CL:0002620,1.19e-07,23;CL:0000322,2.63e-07,3;CL:0002580,2.97e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!5.63e-09!5;DOID:450!5.63e-09!5;DOID:66!5.63e-09!5;DOID:423!5.63e-09!5;DOID:0080000!5.63e-09!5;DOID:11722!5.63e-09!5 | |ontology_enrichment_disease=DOID:17!5.63e-09!5;DOID:450!5.63e-09!5;DOID:66!5.63e-09!5;DOID:423!5.63e-09!5;DOID:0080000!5.63e-09!5;DOID:11722!5.63e-09!5 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000415!2.18e-07!4;UBERON:0007240!2.18e-07!4;UBERON:0005742!2.18e-07!4;UBERON:0005734!2.18e-07!4;UBERON:0004664!2.18e-07!4;UBERON:0004663!2.18e-07!4;UBERON:0003688!3.31e-07!6;UBERON:0002358!3.31e-07!6;UBERON:0003684!3.31e-07!6;UBERON:0001178!3.31e-07!6;UBERON:0002097!3.83e-07!40 | |ontology_enrichment_uberon=UBERON:0000415!2.18e-07!4;UBERON:0007240!2.18e-07!4;UBERON:0005742!2.18e-07!4;UBERON:0005734!2.18e-07!4;UBERON:0004664!2.18e-07!4;UBERON:0004663!2.18e-07!4;UBERON:0003688!3.31e-07!6;UBERON:0002358!3.31e-07!6;UBERON:0003684!3.31e-07!6;UBERON:0001178!3.31e-07!6;UBERON:0002097!3.83e-07!40 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;2.26e-19;4!UBERON:0000415;2.26e-19;4!UBERON:0007240;2.26e-19;4!UBERON:0005742;2.26e-19;4!UBERON:0005734;2.26e-19;4!UBERON:0004664;2.26e-19;4!UBERON:0004663;2.26e-19;4!UBERON:0001136;2.71e-19;1!UBERON:0001343;2.71e-19;1!UBERON:0004910;2.71e-19;1!UBERON:0004813;2.71e-19;1!UBERON:0004909;2.48e-10;2!UBERON:0000947;1.85e-08;21!UBERON:0010191;1.85e-08;21!UBERON:0004821;2.63e-07;3!UBERON:0007499;2.63e-07;3!UBERON:0003215;2.63e-07;3!UBERON:0010368;2.63e-07;3!UBERON:0009911;2.63e-07;3!UBERON:0002299;2.63e-07;3!UBERON:0006524;2.63e-07;3!UBERON:0008874;2.63e-07;3!UBERON:0002169;2.63e-07;3!UBERON:0004894;2.63e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.56e-19,1;UBERON:0001343,1.56e-19,1;UBERON:0004910,1.56e-19,1;UBERON:0005154,1.56e-19,1;UBERON:0005295,1.56e-19,1;UBERON:0004813,1.56e-19,1;UBERON:0005297,1.56e-19,1;UBERON:0005294,1.56e-19,1;UBERON:0010141,1.56e-19,1;UBERON:0005891,1.56e-19,1;UBERON:0000415,2.26e-19,4;UBERON:0007240,2.26e-19,4;UBERON:0005742,2.26e-19,4;UBERON:0005734,2.26e-19,4;UBERON:0004664,2.26e-19,4;UBERON:0004663,2.26e-19,4;UBERON:0004797,1.68e-11,7;UBERON:0004909,1.89e-10,2;UBERON:0004871,5.80e-10,8;UBERON:0000947,1.67e-08,21;UBERON:0010191,1.67e-08,21;UBERON:0004821,2.63e-07,3;UBERON:0003215,2.63e-07,3;UBERON:0010368,2.63e-07,3;UBERON:0009911,2.63e-07,3;UBERON:0002299,2.63e-07,3;UBERON:0006524,2.63e-07,3;UBERON:0008874,2.63e-07,3;UBERON:0002169,2.63e-07,3;UBERON:0004894,2.63e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,1.22866968250754,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,5.42877641334197,2.29469296599051,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0.213557388818567,0.211931901159562,0.300091096084402,0,0.257640540045629,0,1.0126579934476,0,1.51460264546469,0,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,1.88887408098384,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0.751288044986092,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,1.13352962756136,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0.214100523890983,0.422863212287913,0,0.446961094427288,0,0,0,0,1.22866968250754,0.697801167972428,0,0,0,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0,0.0945348171640679,0,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,5.42877641334197,2.29469296599051,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25572744982203,0.213557388818567,0.211931901159562,0.300091096084402,0,0.257640540045629,0,1.0126579934476,0,1.51460264546469,0,0.161646056818812,0.710019185033229,0.10075209822764,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.428933980974443,0,0,0,0,0,0.301439377059586,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.157702415033935,0.468565659970853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,1.07423381301644,0.561320188866147,0.128139149255701,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0.650060246036521,1.6068392984416,0,0,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,1.88887408098384,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0.889811221596536,0,0,0.15543720058278,0,0,0,0.155262956876259,0,0.265841714557995,0,0.751288044986092,0,0,0,0,0,0.398095888698616,0.400027764663154,0,0,0,0,0,0,1.13352962756136,0,0,0,0,0,0.353378291891762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:16505568..16505582,- | |short_description=p@chr12:16505568..16505582,- | ||
}} | }} |
Latest revision as of 07:14, 24 July 2015
Short description: | p@chr12:16505568..16505582, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:16505568..16505582, - |
Coexpression cluster: | C91_Fibroblast_Smooth_mesenchymal_Mesothelial_Small_Preadipocyte_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.56e-19 | 1 |
seminiferous tubule epithelial cell | 1.56e-19 | 1 |
Sertoli cell | 1.56e-19 | 1 |
fibroblast of tunica adventitia of artery | 2.26e-19 | 4 |
fibroblast of the aortic adventitia | 2.26e-19 | 4 |
fibroblast | 2.00e-08 | 76 |
skin fibroblast | 1.19e-07 | 23 |
pneumocyte | 2.63e-07 | 3 |
preadipocyte of the breast | 2.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.56e-19 | 1 |
seminiferous tubule of testis | 1.56e-19 | 1 |
epithelium of male gonad | 1.56e-19 | 1 |
epithelial cord | 1.56e-19 | 1 |
sex cord | 1.56e-19 | 1 |
seminiferous tubule epithelium | 1.56e-19 | 1 |
testis sex cord | 1.56e-19 | 1 |
genital ridge | 1.56e-19 | 1 |
primitive sex cord of indifferent gonad | 1.56e-19 | 1 |
coelomic epithelium | 1.56e-19 | 1 |
artery wall | 2.26e-19 | 4 |
tunica adventitia of artery | 2.26e-19 | 4 |
adventitia | 2.26e-19 | 4 |
tunica adventitia of blood vessel | 2.26e-19 | 4 |
aorta tunica adventitia | 2.26e-19 | 4 |
aorta wall | 2.26e-19 | 4 |
blood vessel layer | 1.68e-11 | 7 |
epithelium of gonad | 1.89e-10 | 2 |
somatic layer of lateral plate mesoderm | 5.80e-10 | 8 |
aorta | 1.67e-08 | 21 |
aortic system | 1.67e-08 | 21 |
pulmonary alveolus epithelium | 2.63e-07 | 3 |
alveolus | 2.63e-07 | 3 |
pulmonary lobule | 2.63e-07 | 3 |
lobule | 2.63e-07 | 3 |
alveolus of lung | 2.63e-07 | 3 |
alveolar system | 2.63e-07 | 3 |
pulmonary acinus | 2.63e-07 | 3 |
alveolar sac | 2.63e-07 | 3 |
alveolar wall | 2.63e-07 | 3 |