FFCP PHASE1:Hg19::chr15:21906123..21906130,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:21906123..21906130,+ | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_at_chr15:21906123..21906130,+ | |description=CAGE_peak_at_chr15:21906123..21906130,+ | ||
|id=chr15:21906123..21906130,+ | |id=chr15:21906123..21906130,+ | ||
|ontology_enrichment_celltype=CL:0000860!7.30e-35!45;CL:0002057!7.62e-31!42;CL:0002194!1.67e-25!63;CL:0000576!1.67e-25!63;CL:0000040!1.67e-25!63;CL:0000559!1.67e-25!63;CL:0002009!1.46e-24!65;CL:0000839!1.91e-22!70;CL:0000557!4.68e-22!71;CL:0000766!2.87e-20!76;CL:0000763!1.26e-19!112;CL:0000049!1.26e-19!112;CL:0002087!5.03e-15!119;CL:0000037!7.53e-14!172;CL:0000566!7.53e-14!172;CL:0002322!8.61e-13!5;CL:0000988!1.05e-12!182;CL:0002032!1.98e-12!165;CL:0000837!1.98e-12!165;CL:0000738!6.74e-12!140;CL:0002031!1.14e-11!124;CL:0002393!3.77e-07!9;CL:0002397!3.77e-07!9 | |ontology_enrichment_celltype=CL:0000860!7.30e-35!45;CL:0002057!7.62e-31!42;CL:0002194!1.67e-25!63;CL:0000576!1.67e-25!63;CL:0000040!1.67e-25!63;CL:0000559!1.67e-25!63;CL:0002009!1.46e-24!65;CL:0000839!1.91e-22!70;CL:0000557!4.68e-22!71;CL:0000766!2.87e-20!76;CL:0000763!1.26e-19!112;CL:0000049!1.26e-19!112;CL:0002087!5.03e-15!119;CL:0000037!7.53e-14!172;CL:0000566!7.53e-14!172;CL:0002322!8.61e-13!5;CL:0000988!1.05e-12!182;CL:0002032!1.98e-12!165;CL:0000837!1.98e-12!165;CL:0000738!6.74e-12!140;CL:0002031!1.14e-11!124;CL:0002393!3.77e-07!9;CL:0002397!3.77e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.63e-24;33!CL:0002057;4.63e-24;33!CL:0000473;1.28e-15;39!CL:0000234;1.28e-15;39!CL:0000054;2.72e-10;2!CL:0000137;2.72e-10;2!CL:0000092;2.72e-10;2!CL:0000766;4.04e-10;69!CL:0000576;1.90e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.92e-21,42;CL:0002057,9.92e-21,42;CL:0002194,9.11e-19,59;CL:0000576,9.11e-19,59;CL:0000040,9.11e-19,59;CL:0000559,9.11e-19,59;CL:0002009,3.78e-18,61;CL:0000473,4.12e-18,48;CL:0000234,4.12e-18,48;CL:0000839,9.13e-17,66;CL:0000557,1.63e-16,67;CL:0000766,2.36e-15,72;CL:0000054,2.72e-10,2;CL:0000137,2.72e-10,2;CL:0000092,2.72e-10,2;CL:0000763,3.98e-10,108;CL:0000049,3.98e-10,108;CL:0002087,1.75e-09,115;CL:0002031,4.54e-09,120;CL:0000738,6.05e-08,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.66e-15;42!UBERON:0009117;3.43e-08;10!UBERON:0005564;3.43e-08;10 | |||
|ontology_enrichment_disease=DOID:1036!4.51e-08!8 | |ontology_enrichment_disease=DOID:1036!4.51e-08!8 | ||
|ontology_enrichment_disease_v019=DOID:0060085;3.25e-19;1!DOID:3165;3.25e-19;1!DOID:0060121;3.25e-19;1!DOID:2438;3.25e-19;1!DOID:4418;3.25e-19;1!DOID:200;2.72e-10;2!DOID:4305;2.72e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.25e-19,1;DOID:3165,3.25e-19,1;DOID:0060121,3.25e-19,1;DOID:2438,3.25e-19,1;DOID:4418,3.25e-19,1;DOID:200,2.72e-10,2;DOID:4305,2.72e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!5.36e-19!80;UBERON:0002390!2.29e-18!102;UBERON:0003061!2.29e-18!102;UBERON:0001474!2.59e-17!86;UBERON:0002193!3.34e-16!112;UBERON:0002405!2.99e-14!115;UBERON:0004765!5.59e-14!101;UBERON:0001434!5.59e-14!101 | |ontology_enrichment_uberon=UBERON:0002371!5.36e-19!80;UBERON:0002390!2.29e-18!102;UBERON:0003061!2.29e-18!102;UBERON:0001474!2.59e-17!86;UBERON:0002193!3.34e-16!112;UBERON:0002405!2.99e-14!115;UBERON:0004765!5.59e-14!101;UBERON:0001434!5.59e-14!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.18e-10;8!UBERON:0003135;1.59e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.56e-14,76;UBERON:0001474,1.88e-13,82;UBERON:0004765,3.15e-12,90;UBERON:0002405,8.01e-12,93;UBERON:0002390,3.35e-11,98;UBERON:0003061,3.35e-11,98;UBERON:0001434,5.72e-11,100;UBERON:0002193,3.98e-10,108;UBERON:0000473,4.84e-10,8;UBERON:0003135,1.51e-07,11 | |||
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| ||
|short_description=p@chr15:21906123..21906130,+ | |short_description=p@chr15:21906123..21906130,+ | ||
}} | }} |
Latest revision as of 00:21, 25 July 2015
Short description: | p@chr15:21906123..21906130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:21906123..21906130, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.92e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.92e-21 | 42 |
monopoietic cell | 9.11e-19 | 59 |
monocyte | 9.11e-19 | 59 |
monoblast | 9.11e-19 | 59 |
promonocyte | 9.11e-19 | 59 |
macrophage dendritic cell progenitor | 3.78e-18 | 61 |
defensive cell | 4.12e-18 | 48 |
phagocyte | 4.12e-18 | 48 |
myeloid lineage restricted progenitor cell | 9.13e-17 | 66 |
granulocyte monocyte progenitor cell | 1.63e-16 | 67 |
myeloid leukocyte | 2.36e-15 | 72 |
bone matrix secreting cell | 2.72e-10 | 2 |
osteocyte | 2.72e-10 | 2 |
osteoclast | 2.72e-10 | 2 |
myeloid cell | 3.98e-10 | 108 |
common myeloid progenitor | 3.98e-10 | 108 |
nongranular leukocyte | 1.75e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 4.54e-09 | 120 |
leukocyte | 6.05e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.56e-14 | 76 |
bone element | 1.88e-13 | 82 |
skeletal element | 3.15e-12 | 90 |
immune system | 8.01e-12 | 93 |
hematopoietic system | 3.35e-11 | 98 |
blood island | 3.35e-11 | 98 |
skeletal system | 5.72e-11 | 100 |
hemolymphoid system | 3.98e-10 | 108 |
testis | 4.84e-10 | 8 |
male reproductive organ | 1.51e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.25e-19 | 1 |
skin benign neoplasm | 3.25e-19 | 1 |
integumentary system benign neoplasm | 3.25e-19 | 1 |
dermis tumor | 3.25e-19 | 1 |
cutaneous fibrous histiocytoma | 3.25e-19 | 1 |
giant cell tumor | 2.72e-10 | 2 |
bone giant cell tumor | 2.72e-10 | 2 |