FFCP PHASE1:Hg19::chr16:29802036..29802086,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3835 | |EntrezGene=3835 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6391 | |HGNC=6391 | ||
|TSSclassifier=strong | |||
|UniProt=Q14807,E7EUJ5 | |UniProt=Q14807,E7EUJ5 | ||
|association_with_transcript=0bp_to_ENST00000160827,ENST00000400750,NM_007317,uc002dts.3,uc010vdv.1_5end | |association_with_transcript=0bp_to_ENST00000160827,ENST00000400750,NM_007317,uc002dts.3,uc010vdv.1_5end | ||
|cluster_id=chr16:29802036..29802086,+ | |||
|coexpression_cluster_id=C1332 | |coexpression_cluster_id=C1332 | ||
|description=CAGE_peak_1_at_KIF22_5end | |description=CAGE_peak_1_at_KIF22_5end | ||
|id=chr16:29802036..29802086,+ | |id=chr16:29802036..29802086,+ | ||
|ontology_enrichment_celltype=CL:0000542!7.12e-13!53;CL:0000051!7.12e-13!53;CL:0000838!2.08e-12!52;CL:0000003!5.75e-12!722;CL:0000084!6.90e-11!25;CL:0000827!6.90e-11!25;CL:0000012!1.88e-10!682;CL:0000548!8.02e-10!679;CL:0000004!8.02e-10!679;CL:0000255!8.02e-10!679;CL:0000066!9.14e-09!254;CL:0000791!4.59e-08!18;CL:0000789!4.59e-08!18;CL:0002420!4.59e-08!18;CL:0002419!4.59e-08!18;CL:0000790!4.59e-08!18;CL:0000063!2.72e-07!578 | |ontology_enrichment_celltype=CL:0000542!7.12e-13!53;CL:0000051!7.12e-13!53;CL:0000838!2.08e-12!52;CL:0000003!5.75e-12!722;CL:0000084!6.90e-11!25;CL:0000827!6.90e-11!25;CL:0000012!1.88e-10!682;CL:0000548!8.02e-10!679;CL:0000004!8.02e-10!679;CL:0000255!8.02e-10!679;CL:0000066!9.14e-09!254;CL:0000791!4.59e-08!18;CL:0000789!4.59e-08!18;CL:0002420!4.59e-08!18;CL:0002419!4.59e-08!18;CL:0000790!4.59e-08!18;CL:0000063!2.72e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000084;7.69e-11;25!CL:0000791;4.89e-08;18!CL:0000789;4.89e-08;18!CL:0002419;4.89e-08;18!CL:0000542;1.22e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,7.12e-13,53;CL:0000051,7.12e-13,53;CL:0000838,2.08e-12,52;CL:0000084,6.89e-11,25;CL:0000827,6.89e-11,25;CL:0000066,4.23e-09,253;CL:0000791,4.59e-08,18;CL:0000789,4.59e-08,18;CL:0002420,4.59e-08,18;CL:0002419,4.59e-08,18;CL:0000790,4.59e-08,18 | |||
|ontology_enrichment_development_v019=CL:0000790;4.89e-08;18!CL:0000051;1.22e-07;53 | |||
|ontology_enrichment_disease=DOID:162!2.42e-22!235;DOID:14566!5.42e-21!239;DOID:2531!3.37e-17!51;DOID:0060083!3.37e-17!51;DOID:0050686!6.78e-14!137;DOID:1240!1.16e-13!39;DOID:8692!9.39e-10!31;DOID:0050687!3.34e-09!143;DOID:305!1.31e-08!106 | |ontology_enrichment_disease=DOID:162!2.42e-22!235;DOID:14566!5.42e-21!239;DOID:2531!3.37e-17!51;DOID:0060083!3.37e-17!51;DOID:0050686!6.78e-14!137;DOID:1240!1.16e-13!39;DOID:8692!9.39e-10!31;DOID:0050687!3.34e-09!143;DOID:305!1.31e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:1240;6.94e-11;39!DOID:2531;8.17e-11;51!DOID:0060083;8.17e-11;51!DOID:8692;2.19e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.53e-22,235;DOID:14566,5.64e-21,239;DOID:2531,3.37e-17,51;DOID:0060083,3.37e-17,51;DOID:0050686,7.03e-14,137;DOID:1240,1.16e-13,39;DOID:8692,9.38e-10,31;DOID:0050687,3.41e-09,143;DOID:305,1.31e-08,106 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@KIF22 | |short_description=p1@KIF22 | ||
}} | }} |
Latest revision as of 03:26, 16 September 2015
Short description: | p1@KIF22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KIF22_5end |
Coexpression cluster: | C1332_lymphoma_Reticulocytes_chronic_embryonic_Renal_Hodgkin_Alveolar |
Association with transcript: | 0bp_to_ENST00000160827, ENST00000400750, NM_007317, uc002dts.3, uc010vdv.1_5end |
EntrezGene: | KIF22 |
HGNC: | 6391 |
UniProt: | Q14807E7EUJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 7.12e-13 | 53 |
common lymphoid progenitor | 7.12e-13 | 53 |
lymphoid lineage restricted progenitor cell | 2.08e-12 | 52 |
T cell | 6.89e-11 | 25 |
pro-T cell | 6.89e-11 | 25 |
epithelial cell | 4.23e-09 | 253 |
mature alpha-beta T cell | 4.59e-08 | 18 |
alpha-beta T cell | 4.59e-08 | 18 |
immature T cell | 4.59e-08 | 18 |
mature T cell | 4.59e-08 | 18 |
immature alpha-beta T cell | 4.59e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.53e-22 | 235 |
disease of cellular proliferation | 5.64e-21 | 239 |
hematologic cancer | 3.37e-17 | 51 |
immune system cancer | 3.37e-17 | 51 |
organ system cancer | 7.03e-14 | 137 |
leukemia | 1.16e-13 | 39 |
myeloid leukemia | 9.38e-10 | 31 |
cell type cancer | 3.41e-09 | 143 |
carcinoma | 1.31e-08 | 106 |