FFCP PHASE1:Hg19::chr18:43405501..43405513,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:43405501..43405513,+
|short_description=p5@SIGLEC15
|description=CAGE_peak_5_at_SIGLEC15_5end
|association_with_transcript=-31bp_to_ENST00000389474,NM_213...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=284266 | |EntrezGene=284266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27596 | |HGNC=27596 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZMC9 | |UniProt=Q6ZMC9 | ||
|association_with_transcript=-31bp_to_ENST00000389474,NM_213602,uc002lbl.1_5end | |||
|cluster_id=chr18:43405501..43405513,+ | |||
|description=CAGE_peak_5_at_SIGLEC15_5end | |||
|id=chr18:43405501..43405513,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.40e-10!180;CL:0000548!3.58e-09!679;CL:0000004!3.58e-09!679;CL:0000255!3.58e-09!679;CL:0000012!5.70e-09!682;CL:0000048!7.49e-09!430;CL:0000723!9.22e-09!436;CL:0000034!3.68e-08!444;CL:0002371!4.00e-08!591;CL:0000680!9.25e-08!57;CL:0000056!9.25e-08!57;CL:0000355!9.25e-08!57;CL:0000144!1.12e-07!625;CL:0000183!2.35e-07!59;CL:0000244!7.27e-07!4;CL:0000731!7.27e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000235;4.44e-20;6!CL:1000449;2.45e-12;15!CL:1000507;2.97e-12;10!CL:1000494;2.97e-12;10!CL:1000497;7.27e-11;17!CL:0002518;7.27e-11;17!CL:0002681;3.09e-10;12!CL:0002584;3.09e-10;12!CL:0000222;3.31e-09;1!CL:0000228;4.51e-09;1!CL:0002372;4.51e-09;1!CL:0000244;2.77e-08;4!CL:0000731;2.77e-08;4!CL:0002539;3.76e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,5.86e-20,6;CL:1000449,1.91e-12,15;CL:1000507,2.73e-12,10;CL:1000494,2.73e-12,10;CL:1000497,5.84e-11,17;CL:0002518,5.84e-11,17;CL:0002681,2.81e-10,12;CL:0002584,2.81e-10,12;CL:0000228,4.19e-09,1;CL:0002372,4.19e-09,1;CL:0000244,2.23e-08,4;CL:0000731,2.23e-08,4;CL:0002539,2.75e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060085;3.06e-09;1!DOID:3165;3.06e-09;1!DOID:0060121;3.06e-09;1!DOID:2438;3.06e-09;1!DOID:4418;3.06e-09;1!DOID:0060072;1.50e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,3.06e-09,1;DOID:3165,3.06e-09,1;DOID:0060121,3.06e-09,1;DOID:2438,3.06e-09,1;DOID:4418,3.06e-09,1;DOID:0060072,1.72e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0002204!7.97e-13!167;UBERON:0000486!2.98e-07!82;UBERON:0001134!7.48e-07!61;UBERON:0002036!7.48e-07!61;UBERON:0003082!7.48e-07!61;UBERON:0000914!8.43e-07!83;UBERON:0002329!8.43e-07!83;UBERON:0003077!8.43e-07!83;UBERON:0003059!8.43e-07!83;UBERON:0007282!8.43e-07!83;UBERON:0009618!8.43e-07!83;UBERON:0007285!8.43e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.45e-12;15!UBERON:0004819;2.45e-12;15!UBERON:0001285;2.45e-12;15!UBERON:0007684;2.45e-12;15!UBERON:0004211;2.97e-12;10!UBERON:0009773;2.97e-12;10!UBERON:0001231;2.97e-12;10!UBERON:0004810;2.97e-12;10!UBERON:0006554;2.34e-11;30!UBERON:0001008;2.34e-11;30!UBERON:0001225;3.09e-10;12!UBERON:0008987;3.09e-10;12!UBERON:0001851;3.26e-08;15!UBERON:0000353;3.26e-08;15!UBERON:0002113;1.23e-07;24!UBERON:0011143;1.23e-07;24!UBERON:0004237;3.76e-07;10!UBERON:0004695;3.76e-07;10!UBERON:0002111;3.76e-07;10!UBERON:0004178;3.76e-07;10!UBERON:0000365;8.65e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004211,1.91e-12,15;UBERON:0009773,1.91e-12,15;UBERON:0001231,1.91e-12,15;UBERON:0001285,1.91e-12,15;UBERON:0007684,1.91e-12,15;UBERON:0004208,1.91e-12,15;UBERON:0004810,2.73e-12,10;UBERON:0006555,1.17e-11,16;UBERON:0004819,1.17e-11,16;UBERON:0001225,2.81e-10,12;UBERON:0008987,2.81e-10,12;UBERON:0001851,3.03e-08,15;UBERON:0000353,3.03e-08,15;UBERON:0004237,2.75e-07,10;UBERON:0004695,2.75e-07,10;UBERON:0002111,2.75e-07,10;UBERON:0004178,2.75e-07,10;UBERON:0002113,4.32e-07,26;UBERON:0003918,4.32e-07,26;UBERON:0011143,4.32e-07,26;UBERON:0005095,4.32e-07,26;UBERON:0007687,4.32e-07,26;UBERON:0006554,4.99e-07,47;UBERON:0000365,7.26e-07,5;UBERON:0001008,7.27e-07,48 | |||
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| ||
|short_description=p5@SIGLEC15 | |||
}} | }} |
Latest revision as of 14:35, 19 September 2015
Short description: | p5@SIGLEC15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIGLEC15_5end |
Coexpression cluster: | NA |
Association with transcript: | -31bp_to_ENST00000389474, NM_213602, uc002lbl.1_5end |
EntrezGene: | SIGLEC15 |
HGNC: | 27596 |
UniProt: | Q6ZMC9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 5.86e-20 | 6 |
epithelial cell of nephron | 1.91e-12 | 15 |
kidney tubule cell | 2.73e-12 | 10 |
nephron tubule epithelial cell | 2.73e-12 | 10 |
kidney cell | 5.84e-11 | 17 |
kidney epithelial cell | 5.84e-11 | 17 |
kidney cortical cell | 2.81e-10 | 12 |
renal cortical epithelial cell | 2.81e-10 | 12 |
multinucleate cell | 4.19e-09 | 1 |
myotube | 4.19e-09 | 1 |
transitional epithelial cell | 2.23e-08 | 4 |
urothelial cell | 2.23e-08 | 4 |
aortic smooth muscle cell | 2.75e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
nephron epithelium | 1.91e-12 | 15 |
renal tubule | 1.91e-12 | 15 |
nephron tubule | 1.91e-12 | 15 |
nephron | 1.91e-12 | 15 |
uriniferous tubule | 1.91e-12 | 15 |
nephrogenic mesenchyme | 1.91e-12 | 15 |
nephron tubule epithelium | 2.73e-12 | 10 |
excretory tube | 1.17e-11 | 16 |
kidney epithelium | 1.17e-11 | 16 |
cortex of kidney | 2.81e-10 | 12 |
renal parenchyma | 2.81e-10 | 12 |
cortex | 3.03e-08 | 15 |
parenchyma | 3.03e-08 | 15 |
blood vessel smooth muscle | 2.75e-07 | 10 |
arterial system smooth muscle | 2.75e-07 | 10 |
artery smooth muscle tissue | 2.75e-07 | 10 |
aorta smooth muscle tissue | 2.75e-07 | 10 |
kidney | 4.32e-07 | 26 |
kidney mesenchyme | 4.32e-07 | 26 |
upper urinary tract | 4.32e-07 | 26 |
kidney rudiment | 4.32e-07 | 26 |
kidney field | 4.32e-07 | 26 |
urinary system structure | 4.99e-07 | 47 |
urothelium | 7.26e-07 | 5 |
renal system | 7.27e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 3.06e-09 | 1 |
skin benign neoplasm | 3.06e-09 | 1 |
integumentary system benign neoplasm | 3.06e-09 | 1 |
dermis tumor | 3.06e-09 | 1 |
cutaneous fibrous histiocytoma | 3.06e-09 | 1 |
benign neoplasm | 1.72e-08 | 4 |