FFCP PHASE1:Hg19::chr19:45409042..45409061,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=348 | |EntrezGene=348 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=613 | |HGNC=613 | ||
|TSSclassifier=strong | |||
|UniProt=E9PEV4 | |UniProt=E9PEV4 | ||
|association_with_transcript=0bp_to_ENST00000446996,ENST00000485628_5end | |association_with_transcript=0bp_to_ENST00000446996,ENST00000485628_5end | ||
|cluster_id=chr19:45409042..45409061,+ | |||
|coexpression_cluster_id=C848 | |coexpression_cluster_id=C848 | ||
|description=CAGE_peak_1_at_APOE_5end | |description=CAGE_peak_1_at_APOE_5end | ||
|id=chr19:45409042..45409061,+ | |id=chr19:45409042..45409061,+ | ||
|ontology_enrichment_celltype=CL:0000325!1.19e-09!39 | |ontology_enrichment_celltype=CL:0000325!1.19e-09!39 | ||
|ontology_enrichment_celltype_v019=CL:0000147;8.46e-07;14!CL:0000136;8.65e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000147,8.44e-07,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.94e-25!115;UBERON:0005743!3.91e-23!86;UBERON:0001017!6.98e-22!82;UBERON:0000073!3.64e-21!94;UBERON:0001016!3.64e-21!94;UBERON:0003075!3.86e-21!86;UBERON:0007284!3.86e-21!86;UBERON:0002616!4.53e-21!59;UBERON:0002346!2.15e-20!90;UBERON:0001049!2.38e-20!57;UBERON:0005068!2.38e-20!57;UBERON:0006241!2.38e-20!57;UBERON:0007135!2.38e-20!57;UBERON:0000955!1.13e-18!69;UBERON:0006238!1.13e-18!69;UBERON:0004121!3.18e-18!169;UBERON:0000924!6.02e-18!173;UBERON:0006601!6.02e-18!173;UBERON:0000033!7.57e-18!123;UBERON:0000153!2.21e-17!129;UBERON:0007811!2.21e-17!129;UBERON:0000481!2.00e-15!347;UBERON:0003056!2.04e-15!61;UBERON:0000062!3.97e-15!511;UBERON:0003080!6.00e-15!42;UBERON:0002780!9.25e-15!41;UBERON:0001890!9.25e-15!41;UBERON:0006240!9.25e-15!41;UBERON:0000475!1.32e-14!365;UBERON:0000922!1.61e-14!612;UBERON:0000119!1.63e-14!312;UBERON:0000483!2.22e-14!309;UBERON:0000468!2.71e-14!659;UBERON:0002020!8.35e-13!34;UBERON:0003528!8.35e-13!34;UBERON:0001893!1.18e-12!34;UBERON:0002791!2.79e-12!33;UBERON:0002050!3.86e-12!605;UBERON:0005423!3.86e-12!605;UBERON:0000923!5.52e-12!604;UBERON:0005291!5.52e-12!604;UBERON:0006598!5.52e-12!604;UBERON:0002532!5.52e-12!604;UBERON:0001869!1.15e-11!32;UBERON:0004111!6.47e-10!241;UBERON:0000064!7.07e-10!219;UBERON:0000477!1.89e-09!286;UBERON:0000467!2.12e-09!625;UBERON:0002619!3.01e-09!22;UBERON:0000480!3.16e-09!626;UBERON:0000025!3.90e-09!194;UBERON:0001950!2.46e-08!20;UBERON:0000956!2.96e-08!25;UBERON:0000203!2.96e-08!25;UBERON:0002365!5.54e-08!31;UBERON:0002330!5.54e-08!31;UBERON:0002107!1.06e-07!19;UBERON:0006925!1.06e-07!19;UBERON:0008836!1.06e-07!19;UBERON:0002530!9.30e-07!59 | |ontology_enrichment_uberon=UBERON:0007023!5.94e-25!115;UBERON:0005743!3.91e-23!86;UBERON:0001017!6.98e-22!82;UBERON:0000073!3.64e-21!94;UBERON:0001016!3.64e-21!94;UBERON:0003075!3.86e-21!86;UBERON:0007284!3.86e-21!86;UBERON:0002616!4.53e-21!59;UBERON:0002346!2.15e-20!90;UBERON:0001049!2.38e-20!57;UBERON:0005068!2.38e-20!57;UBERON:0006241!2.38e-20!57;UBERON:0007135!2.38e-20!57;UBERON:0000955!1.13e-18!69;UBERON:0006238!1.13e-18!69;UBERON:0004121!3.18e-18!169;UBERON:0000924!6.02e-18!173;UBERON:0006601!6.02e-18!173;UBERON:0000033!7.57e-18!123;UBERON:0000153!2.21e-17!129;UBERON:0007811!2.21e-17!129;UBERON:0000481!2.00e-15!347;UBERON:0003056!2.04e-15!61;UBERON:0000062!3.97e-15!511;UBERON:0003080!6.00e-15!42;UBERON:0002780!9.25e-15!41;UBERON:0001890!9.25e-15!41;UBERON:0006240!9.25e-15!41;UBERON:0000475!1.32e-14!365;UBERON:0000922!1.61e-14!612;UBERON:0000119!1.63e-14!312;UBERON:0000483!2.22e-14!309;UBERON:0000468!2.71e-14!659;UBERON:0002020!8.35e-13!34;UBERON:0003528!8.35e-13!34;UBERON:0001893!1.18e-12!34;UBERON:0002791!2.79e-12!33;UBERON:0002050!3.86e-12!605;UBERON:0005423!3.86e-12!605;UBERON:0000923!5.52e-12!604;UBERON:0005291!5.52e-12!604;UBERON:0006598!5.52e-12!604;UBERON:0002532!5.52e-12!604;UBERON:0001869!1.15e-11!32;UBERON:0004111!6.47e-10!241;UBERON:0000064!7.07e-10!219;UBERON:0000477!1.89e-09!286;UBERON:0000467!2.12e-09!625;UBERON:0002619!3.01e-09!22;UBERON:0000480!3.16e-09!626;UBERON:0000025!3.90e-09!194;UBERON:0001950!2.46e-08!20;UBERON:0000956!2.96e-08!25;UBERON:0000203!2.96e-08!25;UBERON:0002365!5.54e-08!31;UBERON:0002330!5.54e-08!31;UBERON:0002107!1.06e-07!19;UBERON:0006925!1.06e-07!19;UBERON:0008836!1.06e-07!19;UBERON:0002530!9.30e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.24e-11;53!UBERON:0002616;3.24e-11;53!UBERON:0002780;3.88e-11;41!UBERON:0001890;3.88e-11;41!UBERON:0001893;3.90e-11;34!UBERON:0003528;4.03e-11;34!UBERON:0002020;4.03e-11;34!UBERON:0002791;6.15e-11;32!UBERON:0001869;8.91e-11;32!UBERON:0001017;1.43e-09;75!UBERON:0002619;2.02e-09;22!UBERON:0000955;1.17e-08;68!UBERON:0001950;1.73e-08;20!UBERON:0000956;2.14e-08;25!UBERON:0000203;2.14e-08;25!UBERON:0007023;3.56e-08;114!UBERON:0002365;5.94e-08;31!UBERON:0002330;5.94e-08;31!UBERON:0002107;8.16e-08;19!UBERON:0006925;8.16e-08;19!UBERON:0001016;3.67e-07;83 | |||
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| ||
|short_description=p1@APOE | |short_description=p1@APOE | ||
}} | }} |
Latest revision as of 14:39, 18 September 2015
Short description: | p1@APOE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_APOE_5end |
Coexpression cluster: | C848_Monocytederived_Mesenchymal_Hepatocyte_Adipocyte_CD14_Cardiac_liver |
Association with transcript: | 0bp_to_ENST00000446996, ENST00000485628_5end |
EntrezGene: | APOE |
HGNC: | 613 |
UniProt: | E9PEV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pigment cell | 8.44e-07 | 14 |