FFCP PHASE1:Hg19::chr20:54987405..54987415,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57091 | |EntrezGene=57091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15878 | |HGNC=15878 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=41bp_to_ENST00000497244_5end | |association_with_transcript=41bp_to_ENST00000497244_5end | ||
|cluster_id=chr20:54987405..54987415,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_8_at_CASS4_5end | |description=CAGE_peak_8_at_CASS4_5end | ||
|id=chr20:54987405..54987415,+ | |id=chr20:54987405..54987415,+ | ||
|ontology_enrichment_celltype=CL:0000763!2.27e-20!112;CL:0000049!2.27e-20!112;CL:0000037!4.68e-20!172;CL:0000566!4.68e-20!172;CL:0000988!6.01e-18!182;CL:0002032!6.02e-18!165;CL:0000837!6.02e-18!165;CL:0000738!7.98e-14!140;CL:0000766!5.66e-13!76;CL:0000094!2.27e-10!8;CL:0002057!1.73e-08!42;CL:0000557!3.34e-08!71;CL:0000860!1.35e-07!45;CL:0000839!1.67e-07!70;CL:0000134!1.69e-07!358;CL:0002031!2.40e-07!124;CL:0000081!3.96e-07!11;CL:0002320!5.24e-07!365 | |ontology_enrichment_celltype=CL:0000763!2.27e-20!112;CL:0000049!2.27e-20!112;CL:0000037!4.68e-20!172;CL:0000566!4.68e-20!172;CL:0000988!6.01e-18!182;CL:0002032!6.02e-18!165;CL:0000837!6.02e-18!165;CL:0000738!7.98e-14!140;CL:0000766!5.66e-13!76;CL:0000094!2.27e-10!8;CL:0002057!1.73e-08!42;CL:0000557!3.34e-08!71;CL:0000860!1.35e-07!45;CL:0000839!1.67e-07!70;CL:0000134!1.69e-07!358;CL:0002031!2.40e-07!124;CL:0000081!3.96e-07!11;CL:0002320!5.24e-07!365 | ||
|ontology_enrichment_celltype_v019=CL:0000775;6.45e-44;3!CL:0000094;3.19e-29;8!CL:0000081;2.29e-21;11!CL:0000771;1.39e-08;2!CL:0001014;2.40e-08;2!CL:0002598;2.40e-08;2!CL:0001016;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,6.00e-44,3;CL:0000094,3.08e-29,8;CL:0000081,2.23e-21,11;CL:0000763,1.08e-14,108;CL:0000049,1.08e-14,108;CL:0002032,1.71e-09,161;CL:0000837,1.71e-09,161;CL:0000037,4.78e-09,168;CL:0000771,1.39e-08,2;CL:0000988,1.59e-08,177;CL:0002598,2.15e-08,2;CL:0001014,2.67e-08,2;CL:0001016,2.67e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!8.08e-10!8;DOID:17!8.55e-08!5;DOID:450!8.55e-08!5;DOID:66!8.55e-08!5;DOID:423!8.55e-08!5;DOID:0080000!8.55e-08!5;DOID:11722!8.55e-08!5;DOID:8692!2.67e-07!31 | |ontology_enrichment_disease=DOID:1036!8.08e-10!8;DOID:17!8.55e-08!5;DOID:450!8.55e-08!5;DOID:66!8.55e-08!5;DOID:423!8.55e-08!5;DOID:0080000!8.55e-08!5;DOID:11722!8.55e-08!5;DOID:8692!2.67e-07!31 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.78e-11;31!DOID:1036;5.76e-08;8!DOID:1240;2.94e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.08e-11,31;DOID:1240,4.60e-09,39;DOID:1036,4.66e-08,8;DOID:2531,6.47e-07,51;DOID:0060083,6.47e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.67e-10!57;UBERON:0005068!7.67e-10!57;UBERON:0006241!7.67e-10!57;UBERON:0007135!7.67e-10!57;UBERON:0001893!4.96e-09!34;UBERON:0002780!1.28e-08!41;UBERON:0001890!1.28e-08!41;UBERON:0006240!1.28e-08!41;UBERON:0002616!2.24e-08!59;UBERON:0003080!2.66e-08!42;UBERON:0002791!2.99e-08!33;UBERON:0002619!8.21e-08!22;UBERON:0002020!1.05e-07!34;UBERON:0003528!1.05e-07!34;UBERON:0002390!1.35e-07!102;UBERON:0003061!1.35e-07!102;UBERON:0001950!1.50e-07!20;UBERON:0001869!1.68e-07!32 | |ontology_enrichment_uberon=UBERON:0001049!7.67e-10!57;UBERON:0005068!7.67e-10!57;UBERON:0006241!7.67e-10!57;UBERON:0007135!7.67e-10!57;UBERON:0001893!4.96e-09!34;UBERON:0002780!1.28e-08!41;UBERON:0001890!1.28e-08!41;UBERON:0006240!1.28e-08!41;UBERON:0002616!2.24e-08!59;UBERON:0003080!2.66e-08!42;UBERON:0002791!2.99e-08!33;UBERON:0002619!8.21e-08!22;UBERON:0002020!1.05e-07!34;UBERON:0003528!1.05e-07!34;UBERON:0002390!1.35e-07!102;UBERON:0003061!1.35e-07!102;UBERON:0001950!1.50e-07!20;UBERON:0001869!1.68e-07!32 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0.290796477559129,0,0.485168122375632,0,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.398927315243264,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0.44931452458598,0,0.48217676009124,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.822405995998037,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0,0,0.113309342697566,0.766440987203842,0,0.759059076058509,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0.639312809217652,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,1.20036438433761,0.618315175430633,0,0.18611685633159,0,0,1.00973509697646,0.460249493211497,0.484938170456436,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41929561685538,0.176096868026452,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,11.9841123831549,2.99161459204025,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27948895655667,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,1.2700414963433,0,0,0,0,0,2.03150133361924,0,0,0,0.343505344755765,0,0,0,0,0,0,1.08182271390393,0.66614393599564,0,0,0,0,0,0.568272293612826,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0.676786981851542,0.980312671588698,1.67821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.1248694577575,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.55975789423744,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0.779441235357554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.507326481551255,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.339848664884159,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0,0,0,0,0.290796477559129,0,0.485168122375632,0,0,0,0.575384784644301,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0,0.659702600373432,0.398927315243264,0,0,0,0,0.502497330513487,0,0.217188844705117,0,0,0.316462387440884,0,0.212604299965044,0,0.44931452458598,0,0.48217676009124,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.822405995998037,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.444859689486181,0,0,0.113309342697566,0.766440987203842,0,0.759059076058509,0.318565414324097,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0.289648807765598,0,0.670700859703636,0.639312809217652,0,0,0,0,0,0,0,0,0.392937226493138,0,0,0.324547393654683,0.522389211897802,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.211931901159562,1.20036438433761,0.618315175430633,0,0.18611685633159,0,0,1.00973509697646,0.460249493211497,0.484938170456436,0.355009592516614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.41929561685538,0.176096868026452,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.513372145118994,0,0,0,0,0,11.9841123831549,2.99161459204025,7.87389475528467,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.431428401637234,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27948895655667,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0.191505370132367,1.2700414963433,0,0,0,0,0,2.03150133361924,0,0,0,0.343505344755765,0,0,0,0,0,0,1.08182271390393,0.66614393599564,0,0,0,0,0,0.568272293612826,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482385754501632,0,0.331737779793674,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,0,0.676786981851542,0.980312671588698,1.67821586975843,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0.611030144933625,0,0,0,0.471807930864739,0,0.234264445725339,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,1.1248694577575,0,0.242998226632099,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,1.55975789423744,0,0,0,0,0,0.13223260174269,0,0,0.106787412567695,0.628817220398664,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.625954653532499,0,0,0.434674820589684,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0.276516872303462,0.779441235357554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.256916900385838,0,0.159633859057151,0.41023272848151,0,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.270150338473579,0,0.413373593002368,0.507326481551255,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0.339848664884159,0.263091094251396,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.0939839179798536,0.322289439867886,0,0,0,0,0,0,0.143339583151451,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@CASS4 | |short_description=p8@CASS4 | ||
}} | }} |
Latest revision as of 03:09, 17 September 2015
Short description: | p8@CASS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CASS4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 41bp_to_ENST00000497244_5end |
EntrezGene: | CASS4 |
HGNC: | 15878 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 6.00e-44 | 3 |
granulocyte | 3.08e-29 | 8 |
blood cell | 2.23e-21 | 11 |
myeloid cell | 1.08e-14 | 108 |
common myeloid progenitor | 1.08e-14 | 108 |
hematopoietic oligopotent progenitor cell | 1.71e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-09 | 161 |
hematopoietic stem cell | 4.78e-09 | 168 |
eosinophil | 1.39e-08 | 2 |
hematopoietic cell | 1.59e-08 | 177 |
bronchial smooth muscle cell | 2.15e-08 | 2 |
CD1a-positive Langerhans cell | 2.67e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.67e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.08e-11 | 31 |
leukemia | 4.60e-09 | 39 |
chronic leukemia | 4.66e-08 | 8 |
hematologic cancer | 6.47e-07 | 51 |
immune system cancer | 6.47e-07 | 51 |