FFCP PHASE1:Hg19::chr2:182521699..182521708,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375298 | |EntrezGene=375298 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21699 | |HGNC=21699 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000494398_5end | |association_with_transcript=24bp_to_ENST00000494398_5end | ||
|cluster_id=chr2:182521699..182521708,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_5_at_CERKL_5end | |description=CAGE_peak_5_at_CERKL_5end | ||
|id=chr2:182521699..182521708,- | |id=chr2:182521699..182521708,- | ||
|ontology_enrichment_celltype=CL:0000159!3.90e-07!2 | |ontology_enrichment_celltype=CL:0000159!3.90e-07!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.20e-85;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.76e-21!94;UBERON:0001016!2.76e-21!94;UBERON:0000955!3.44e-21!69;UBERON:0006238!3.44e-21!69;UBERON:0001049!7.55e-21!57;UBERON:0005068!7.55e-21!57;UBERON:0006241!7.55e-21!57;UBERON:0007135!7.55e-21!57;UBERON:0005743!1.21e-20!86;UBERON:0001017!2.68e-20!82;UBERON:0007023!2.01e-19!115;UBERON:0002616!6.32e-18!59;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0002346!1.23e-16!90;UBERON:0002780!4.62e-13!41;UBERON:0001890!4.62e-13!41;UBERON:0006240!4.62e-13!41;UBERON:0003080!1.13e-12!42;UBERON:0000153!1.63e-12!129;UBERON:0007811!1.63e-12!129;UBERON:0000033!2.46e-12!123;UBERON:0004121!2.38e-11!169;UBERON:0000924!6.55e-11!173;UBERON:0006601!6.55e-11!173;UBERON:0003056!3.38e-10!61;UBERON:0003076!4.51e-10!15;UBERON:0003057!4.51e-10!15;UBERON:0004733!1.40e-09!12;UBERON:0002028!1.40e-09!12;UBERON:0007277!1.40e-09!12;UBERON:0004732!8.80e-09!13;UBERON:0002791!1.21e-08!33;UBERON:0001893!2.47e-08!34;UBERON:0002020!2.62e-08!34;UBERON:0003528!2.62e-08!34;UBERON:0003296!3.68e-08!4;UBERON:0010133!3.68e-08!4;UBERON:0001905!9.28e-08!2;UBERON:0002757!9.28e-08!2;UBERON:0010134!9.28e-08!2;UBERON:0002784!9.28e-08!2;UBERON:0005408!9.28e-08!2;UBERON:0001899!9.28e-08!2;UBERON:0001894!1.36e-07!7;UBERON:0006222!1.36e-07!7;UBERON:0001869!2.63e-07!32;UBERON:0002619!3.17e-07!22;UBERON:0001870!3.90e-07!2 | |ontology_enrichment_uberon=UBERON:0000073!2.76e-21!94;UBERON:0001016!2.76e-21!94;UBERON:0000955!3.44e-21!69;UBERON:0006238!3.44e-21!69;UBERON:0001049!7.55e-21!57;UBERON:0005068!7.55e-21!57;UBERON:0006241!7.55e-21!57;UBERON:0007135!7.55e-21!57;UBERON:0005743!1.21e-20!86;UBERON:0001017!2.68e-20!82;UBERON:0007023!2.01e-19!115;UBERON:0002616!6.32e-18!59;UBERON:0003075!1.03e-17!86;UBERON:0007284!1.03e-17!86;UBERON:0002346!1.23e-16!90;UBERON:0002780!4.62e-13!41;UBERON:0001890!4.62e-13!41;UBERON:0006240!4.62e-13!41;UBERON:0003080!1.13e-12!42;UBERON:0000153!1.63e-12!129;UBERON:0007811!1.63e-12!129;UBERON:0000033!2.46e-12!123;UBERON:0004121!2.38e-11!169;UBERON:0000924!6.55e-11!173;UBERON:0006601!6.55e-11!173;UBERON:0003056!3.38e-10!61;UBERON:0003076!4.51e-10!15;UBERON:0003057!4.51e-10!15;UBERON:0004733!1.40e-09!12;UBERON:0002028!1.40e-09!12;UBERON:0007277!1.40e-09!12;UBERON:0004732!8.80e-09!13;UBERON:0002791!1.21e-08!33;UBERON:0001893!2.47e-08!34;UBERON:0002020!2.62e-08!34;UBERON:0003528!2.62e-08!34;UBERON:0003296!3.68e-08!4;UBERON:0010133!3.68e-08!4;UBERON:0001905!9.28e-08!2;UBERON:0002757!9.28e-08!2;UBERON:0010134!9.28e-08!2;UBERON:0002784!9.28e-08!2;UBERON:0005408!9.28e-08!2;UBERON:0001899!9.28e-08!2;UBERON:0001894!1.36e-07!7;UBERON:0006222!1.36e-07!7;UBERON:0001869!2.63e-07!32;UBERON:0002619!3.17e-07!22;UBERON:0001870!3.90e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;5.61e-43;6!UBERON:0002680;5.63e-29;9!UBERON:0001895;5.63e-29;9!UBERON:0004733;5.89e-22;12!UBERON:0002028;5.89e-22;12!UBERON:0004732;2.47e-20;13!UBERON:0001905;1.91e-15;2!UBERON:0002757;1.91e-15;2!UBERON:0010134;1.91e-15;2!UBERON:0005408;1.91e-15;2!UBERON:0001899;1.91e-15;2!UBERON:0003296;2.18e-08;4!UBERON:0010133;2.18e-08;4!UBERON:0002784;2.18e-08;4!UBERON:0000073;8.88e-08;53!UBERON:0002616;8.88e-08;53!UBERON:0000955;3.83e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.21e-43,6;UBERON:0006215,4.21e-43,6;UBERON:0002680,4.66e-29,9;UBERON:0001895,4.66e-29,9;UBERON:0010092,4.66e-29,9;UBERON:0004733,5.10e-22,12;UBERON:0002028,5.10e-22,12;UBERON:0007277,5.10e-22,12;UBERON:0004732,2.17e-20,13;UBERON:0003076,8.77e-18,15;UBERON:0003057,8.77e-18,15;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0000073,1.91e-13,53;UBERON:0002616,1.91e-13,53;UBERON:0001049,9.32e-13,56;UBERON:0005068,9.32e-13,56;UBERON:0006241,9.32e-13,56;UBERON:0007135,9.32e-13,56;UBERON:0000955,1.89e-10,68;UBERON:0006238,1.89e-10,68;UBERON:0001017,7.39e-09,81;UBERON:0003075,7.39e-09,82;UBERON:0007284,7.39e-09,82;UBERON:0002346,1.84e-08,86;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4;UBERON:0001016,5.13e-08,89;UBERON:0010371,4.73e-07,104 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0,1.52581736317083,4.31259113731776,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0.514784993585894,0,0,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.887432412294818,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.639471856518258,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,1.98950775161368,0,0,0,0,0.154348316215889,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.538951212639521,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.834245708559542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0.503865495708552,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.344743373241465,0,0.520874984799877,0,0,1.52581736317083,4.31259113731776,1.47773809476774,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0,0,0,0,0,1.20990716048664,0,0,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0.514784993585894,0,0,0,0.271808412147228,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.887432412294818,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0,0,0,0,0,0.245772908753719,0,0,0.106691729694141,0,0,0,0,0,0.639471856518258,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0.161475645631851,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0.336283722218824,0,0.455324382702595,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,1.98950775161368,0,0,0,0,0.154348316215889,0,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0.538951212639521,0,0,0,0,0,0 | ||
|short_description=p5@CERKL | |short_description=p5@CERKL | ||
}} | }} |
Latest revision as of 21:19, 18 September 2015
Short description: | p5@CERKL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CERKL_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 24bp_to_ENST00000494398_5end |
EntrezGene: | CERKL |
HGNC: | 21699 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.21e-43 | 6 |
rhombic lip | 4.21e-43 | 6 |
regional part of metencephalon | 4.66e-29 | 9 |
metencephalon | 4.66e-29 | 9 |
future metencephalon | 4.66e-29 | 9 |
segmental subdivision of hindbrain | 5.10e-22 | 12 |
hindbrain | 5.10e-22 | 12 |
presumptive hindbrain | 5.10e-22 | 12 |
segmental subdivision of nervous system | 2.17e-20 | 13 |
posterior neural tube | 8.77e-18 | 15 |
chordal neural plate | 8.77e-18 | 15 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
regional part of nervous system | 1.91e-13 | 53 |
regional part of brain | 1.91e-13 | 53 |
neural tube | 9.32e-13 | 56 |
neural rod | 9.32e-13 | 56 |
future spinal cord | 9.32e-13 | 56 |
neural keel | 9.32e-13 | 56 |
brain | 1.89e-10 | 68 |
future brain | 1.89e-10 | 68 |
central nervous system | 7.39e-09 | 81 |
neural plate | 7.39e-09 | 82 |
presumptive neural plate | 7.39e-09 | 82 |
neurectoderm | 1.84e-08 | 86 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |
nervous system | 5.13e-08 | 89 |
ecto-epithelium | 4.73e-07 | 104 |