FFCP PHASE1:Hg19::chr3:183598086..183598109,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:183598086..183598109,- | |||
|coexpression_cluster_id=C822 | |coexpression_cluster_id=C822 | ||
|description=CAGE_peak_at_chr3:183598086..183598109,- | |description=CAGE_peak_at_chr3:183598086..183598109,- | ||
|id=chr3:183598086..183598109,- | |id=chr3:183598086..183598109,- | ||
|ontology_enrichment_celltype=CL:0000763!1.13e-34!112;CL:0000049!1.13e-34!112;CL:0002009!9.09e-29!65;CL:0000557!1.03e-25!71;CL:0002194!2.12e-25!63;CL:0000576!2.12e-25!63;CL:0000040!2.12e-25!63;CL:0000559!2.12e-25!63;CL:0000766!1.78e-23!76;CL:0000037!9.46e-23!172;CL:0000566!9.46e-23!172;CL:0000839!3.54e-22!70;CL:0002032!1.99e-21!165;CL:0000837!1.99e-21!165;CL:0000988!7.00e-21!182;CL:0000738!1.82e-13!140;CL:0002031!9.94e-13!124;CL:0002087!1.86e-12!119;CL:0000840!2.87e-12!5;CL:0001029!2.87e-12!5;CL:0000235!4.27e-11!10;CL:0002619!2.32e-10!3;CL:0000990!4.75e-08!8;CL:0001014!8.90e-07!2;CL:0001016!8.90e-07!2 | |ontology_enrichment_celltype=CL:0000763!1.13e-34!112;CL:0000049!1.13e-34!112;CL:0002009!9.09e-29!65;CL:0000557!1.03e-25!71;CL:0002194!2.12e-25!63;CL:0000576!2.12e-25!63;CL:0000040!2.12e-25!63;CL:0000559!2.12e-25!63;CL:0000766!1.78e-23!76;CL:0000037!9.46e-23!172;CL:0000566!9.46e-23!172;CL:0000839!3.54e-22!70;CL:0002032!1.99e-21!165;CL:0000837!1.99e-21!165;CL:0000988!7.00e-21!182;CL:0000738!1.82e-13!140;CL:0002031!9.94e-13!124;CL:0002087!1.86e-12!119;CL:0000840!2.87e-12!5;CL:0001029!2.87e-12!5;CL:0000235!4.27e-11!10;CL:0002619!2.32e-10!3;CL:0000990!4.75e-08!8;CL:0001014!8.90e-07!2;CL:0001016!8.90e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000235;6.04e-31;6!CL:0002619;2.03e-22;3!CL:0000840;4.50e-11;5!CL:0000763;2.74e-10;100!CL:0000473;2.79e-09;39!CL:0000234;2.79e-09;39!CL:0000766;3.50e-09;69!CL:0000037;3.05e-08;1!CL:0001024;3.05e-08;1!CL:0000576;6.72e-08;48!CL:0000990;1.52e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,8.62e-34,108;CL:0000049,8.62e-34,108;CL:0000235,5.35e-31,6;CL:0002009,2.58e-30,61;CL:0002194,9.55e-28,59;CL:0000576,9.55e-28,59;CL:0000040,9.55e-28,59;CL:0000559,9.55e-28,59;CL:0000557,2.35e-27,67;CL:0000839,1.58e-24,66;CL:0000037,2.46e-24,168;CL:0002032,2.06e-23,161;CL:0000837,2.06e-23,161;CL:0000988,6.95e-23,177;CL:0002619,1.82e-22,3;CL:0000766,2.93e-22,72;CL:0002031,8.62e-16,120;CL:0002087,1.14e-14,115;CL:0000738,1.53e-13,136;CL:0000840,4.67e-11,5;CL:0001029,4.67e-11,5;CL:0000134,3.21e-09,354;CL:0002320,5.95e-09,361;CL:0000473,1.43e-08,48;CL:0000234,1.43e-08,48;CL:0001024,3.06e-08,1;CL:0000219,5.26e-08,386;CL:0000990,1.55e-07,8;CL:0000034,2.76e-07,441;CL:0000048,7.63e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000049;1.38e-09;108 | |||
|ontology_enrichment_disease=DOID:8692!3.65e-16!31;DOID:1240!3.98e-12!39;DOID:2531!1.75e-08!51;DOID:0060083!1.75e-08!51 | |ontology_enrichment_disease=DOID:8692!3.65e-16!31;DOID:1240!3.98e-12!39;DOID:2531!1.75e-08!51;DOID:0060083!1.75e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;1.29e-20;31!DOID:1240;2.07e-14;39!DOID:225;5.59e-09;1!DOID:2531;3.47e-08;51!DOID:0060083;3.47e-08;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.52e-21,31;DOID:1240,8.72e-17,39;DOID:2531,1.91e-12,51;DOID:0060083,1.91e-12,51;DOID:225,5.59e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0002193!5.94e-25!112;UBERON:0002390!8.90e-25!102;UBERON:0003061!8.90e-25!102;UBERON:0002371!6.99e-24!80;UBERON:0001474!1.11e-21!86;UBERON:0002405!5.75e-21!115;UBERON:0004765!2.49e-17!101;UBERON:0001434!2.49e-17!101;UBERON:0003081!3.09e-09!216;UBERON:0002204!2.33e-08!167 | |ontology_enrichment_uberon=UBERON:0002193!5.94e-25!112;UBERON:0002390!8.90e-25!102;UBERON:0003061!8.90e-25!102;UBERON:0002371!6.99e-24!80;UBERON:0001474!1.11e-21!86;UBERON:0002405!5.75e-21!115;UBERON:0004765!2.49e-17!101;UBERON:0001434!2.49e-17!101;UBERON:0003081!3.09e-09!216;UBERON:0002204!2.33e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.49e-27,76;UBERON:0001474,1.30e-24,82;UBERON:0004765,3.80e-22,90;UBERON:0002405,2.49e-21,93;UBERON:0002390,4.44e-20,98;UBERON:0003061,4.44e-20,98;UBERON:0001434,1.30e-19,100;UBERON:0002193,6.40e-18,108;UBERON:0002204,2.07e-10,167;UBERON:0002384,1.38e-08,371;UBERON:0003081,5.79e-08,203 | |||
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| ||
|short_description=p@chr3:183598086..183598109,- | |short_description=p@chr3:183598086..183598109,- | ||
}} | }} |
Latest revision as of 18:47, 29 July 2015
Short description: | p@chr3:183598086..183598109, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:183598086..183598109, - |
Coexpression cluster: | C822_myelodysplastic_acute_Macrophage_Monocytederived_CD14_biphenotypic_Hodgkin |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.49e-27 | 76 |
bone element | 1.30e-24 | 82 |
skeletal element | 3.80e-22 | 90 |
immune system | 2.49e-21 | 93 |
hematopoietic system | 4.44e-20 | 98 |
blood island | 4.44e-20 | 98 |
skeletal system | 1.30e-19 | 100 |
hemolymphoid system | 6.40e-18 | 108 |
musculoskeletal system | 2.07e-10 | 167 |
connective tissue | 1.38e-08 | 371 |
lateral plate mesoderm | 5.79e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.52e-21 | 31 |
leukemia | 8.72e-17 | 39 |
hematologic cancer | 1.91e-12 | 51 |
immune system cancer | 1.91e-12 | 51 |
syndrome | 5.59e-09 | 1 |