FFCP PHASE1:Hg19::chr6:134499476..134499487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6446 | |EntrezGene=6446 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10810 | |HGNC=10810 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-433bp_to_ENST00000528577_5end | |association_with_transcript=-433bp_to_ENST00000528577_5end | ||
|cluster_id=chr6:134499476..134499487,- | |||
|coexpression_cluster_id=C6 | |coexpression_cluster_id=C6 | ||
|description=CAGE_peak_53_at_SGK1_5end | |description=CAGE_peak_53_at_SGK1_5end | ||
|id=chr6:134499476..134499487,- | |id=chr6:134499476..134499487,- | ||
|ontology_enrichment_celltype=CL:0000766!2.38e-57!76;CL:0000860!1.53e-55!45;CL:0002057!5.67e-50!42;CL:0000839!2.35e-45!70;CL:0000557!1.46e-44!71;CL:0002194!2.25e-43!63;CL:0000576!2.25e-43!63;CL:0000040!2.25e-43!63;CL:0000559!2.25e-43!63;CL:0002009!9.94e-42!65;CL:0000763!6.96e-35!112;CL:0000049!6.96e-35!112;CL:0000738!8.65e-35!140;CL:0002087!8.42e-27!119;CL:0000037!9.85e-26!172;CL:0000566!9.85e-26!172;CL:0002031!6.43e-25!124;CL:0000988!1.46e-23!182;CL:0002032!3.43e-23!165;CL:0000837!3.43e-23!165;CL:0002393!7.19e-13!9;CL:0002397!7.19e-13!9;CL:0000134!9.66e-13!358;CL:0002320!3.36e-12!365;CL:0000094!7.58e-12!8;CL:0000219!1.58e-11!390;CL:0000048!2.00e-10!430;CL:0000723!4.64e-10!436;CL:0000034!1.37e-09!444;CL:0000767!5.22e-09!3;CL:0000842!5.79e-09!3;CL:0000081!2.28e-08!11;CL:0002371!3.25e-07!591;CL:0002150!3.37e-07!3;CL:0000861!3.37e-07!3;CL:0000224!8.69e-07!4 | |ontology_enrichment_celltype=CL:0000766!2.38e-57!76;CL:0000860!1.53e-55!45;CL:0002057!5.67e-50!42;CL:0000839!2.35e-45!70;CL:0000557!1.46e-44!71;CL:0002194!2.25e-43!63;CL:0000576!2.25e-43!63;CL:0000040!2.25e-43!63;CL:0000559!2.25e-43!63;CL:0002009!9.94e-42!65;CL:0000763!6.96e-35!112;CL:0000049!6.96e-35!112;CL:0000738!8.65e-35!140;CL:0002087!8.42e-27!119;CL:0000037!9.85e-26!172;CL:0000566!9.85e-26!172;CL:0002031!6.43e-25!124;CL:0000988!1.46e-23!182;CL:0002032!3.43e-23!165;CL:0000837!3.43e-23!165;CL:0002393!7.19e-13!9;CL:0002397!7.19e-13!9;CL:0000134!9.66e-13!358;CL:0002320!3.36e-12!365;CL:0000094!7.58e-12!8;CL:0000219!1.58e-11!390;CL:0000048!2.00e-10!430;CL:0000723!4.64e-10!436;CL:0000034!1.37e-09!444;CL:0000767!5.22e-09!3;CL:0000842!5.79e-09!3;CL:0000081!2.28e-08!11;CL:0002371!3.25e-07!591;CL:0002150!3.37e-07!3;CL:0000861!3.37e-07!3;CL:0000224!8.69e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0002393;5.30e-24;6!CL:0002397;5.30e-24;6!CL:0000226;4.02e-21;3!CL:0000767;4.02e-21;3!CL:0000842;4.02e-21;3!CL:0000094;1.21e-17;8!CL:0000766;1.02e-16;69!CL:0000081;5.16e-13;11!CL:0000576;2.18e-12;48!CL:0000473;2.80e-10;39!CL:0000234;2.80e-10;39!CL:0000860;5.98e-10;33!CL:0002057;5.98e-10;33!CL:0000771;6.67e-09;2!CL:0002087;3.57e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.43e-24,72;CL:0000860,7.82e-23,42;CL:0002057,7.82e-23,42;CL:0000226,4.02e-21,3;CL:0000842,4.02e-21,3;CL:0000767,6.05e-21,3;CL:0000473,6.52e-20,48;CL:0000234,6.52e-20,48;CL:0000738,9.17e-18,136;CL:0000094,1.48e-17,8;CL:0002393,3.09e-16,9;CL:0002397,3.09e-16,9;CL:0000763,5.44e-16,108;CL:0000049,5.44e-16,108;CL:0002194,8.15e-16,59;CL:0000576,8.15e-16,59;CL:0000040,8.15e-16,59;CL:0000559,8.15e-16,59;CL:0002009,2.76e-15,61;CL:0000037,3.40e-14,168;CL:0000839,4.24e-14,66;CL:0000557,6.97e-14,67;CL:0000988,2.02e-13,177;CL:0000081,5.96e-13,11;CL:0002087,2.54e-12,115;CL:0002032,2.05e-10,161;CL:0000837,2.05e-10,161;CL:0000771,6.42e-09,2;CL:0002031,1.68e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.40e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.56e-38!80;UBERON:0002390!2.32e-35!102;UBERON:0003061!2.32e-35!102;UBERON:0001474!7.03e-35!86;UBERON:0002193!3.98e-31!112;UBERON:0004765!1.10e-29!101;UBERON:0001434!1.10e-29!101;UBERON:0002405!7.47e-25!115;UBERON:0002204!1.04e-17!167;UBERON:0003081!1.87e-17!216;UBERON:0002384!1.83e-11!375 | |ontology_enrichment_uberon=UBERON:0002371!2.56e-38!80;UBERON:0002390!2.32e-35!102;UBERON:0003061!2.32e-35!102;UBERON:0001474!7.03e-35!86;UBERON:0002193!3.98e-31!112;UBERON:0004765!1.10e-29!101;UBERON:0001434!1.10e-29!101;UBERON:0002405!7.47e-25!115;UBERON:0002204!1.04e-17!167;UBERON:0003081!1.87e-17!216;UBERON:0002384!1.83e-11!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.35e-14,98;UBERON:0003061,1.35e-14,98;UBERON:0002193,3.57e-13,108;UBERON:0002371,3.47e-12,76;UBERON:0001474,2.94e-11,82;UBERON:0004765,3.29e-10,90;UBERON:0002405,7.33e-10,93;UBERON:0001434,3.95e-09,100 | |||
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| ||
|short_description=p53@SGK1 | |short_description=p53@SGK1 | ||
}} | }} |
Latest revision as of 21:24, 24 September 2015
Short description: | p53@SGK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_53_at_SGK1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -433bp_to_ENST00000528577_5end |
EntrezGene: | SGK1 |
HGNC: | 10810 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.43e-24 | 72 |
classical monocyte | 7.82e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.82e-23 | 42 |
single nucleate cell | 4.02e-21 | 3 |
mononuclear cell | 4.02e-21 | 3 |
basophil | 6.05e-21 | 3 |
defensive cell | 6.52e-20 | 48 |
phagocyte | 6.52e-20 | 48 |
leukocyte | 9.17e-18 | 136 |
granulocyte | 1.48e-17 | 8 |
intermediate monocyte | 3.09e-16 | 9 |
CD14-positive, CD16-positive monocyte | 3.09e-16 | 9 |
myeloid cell | 5.44e-16 | 108 |
common myeloid progenitor | 5.44e-16 | 108 |
monopoietic cell | 8.15e-16 | 59 |
monocyte | 8.15e-16 | 59 |
monoblast | 8.15e-16 | 59 |
promonocyte | 8.15e-16 | 59 |
macrophage dendritic cell progenitor | 2.76e-15 | 61 |
hematopoietic stem cell | 3.40e-14 | 168 |
myeloid lineage restricted progenitor cell | 4.24e-14 | 66 |
granulocyte monocyte progenitor cell | 6.97e-14 | 67 |
hematopoietic cell | 2.02e-13 | 177 |
blood cell | 5.96e-13 | 11 |
nongranular leukocyte | 2.54e-12 | 115 |
hematopoietic oligopotent progenitor cell | 2.05e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-10 | 161 |
eosinophil | 6.42e-09 | 2 |
hematopoietic lineage restricted progenitor cell | 1.68e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.35e-14 | 98 |
blood island | 1.35e-14 | 98 |
hemolymphoid system | 3.57e-13 | 108 |
bone marrow | 3.47e-12 | 76 |
bone element | 2.94e-11 | 82 |
skeletal element | 3.29e-10 | 90 |
immune system | 7.33e-10 | 93 |
skeletal system | 3.95e-09 | 100 |