FFCP PHASE1:Hg19::chr7:138916429..138916474,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=254048 | |EntrezGene=254048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21931 | |HGNC=21931 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=198bp_to_ENST00000288561_5end | |association_with_transcript=198bp_to_ENST00000288561_5end | ||
|cluster_id=chr7:138916429..138916474,+ | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_5_at_UBN2_5end | |description=CAGE_peak_5_at_UBN2_5end | ||
|id=chr7:138916429..138916474,+ | |id=chr7:138916429..138916474,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.58e-13;5!CL:0000313;3.96e-08;1!CL:0000163;1.01e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.69e-13,5;CL:0002028,1.69e-13,5;CL:0000313,3.57e-08,1;CL:0000163,1.04e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0005754;1.69e-08;1!UBERON:0009117;5.64e-07;10!UBERON:0005564;5.64e-07;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;3.96e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,3.57e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.41e-19!115;UBERON:0001049!4.90e-16!57;UBERON:0005068!4.90e-16!57;UBERON:0006241!4.90e-16!57;UBERON:0007135!4.90e-16!57;UBERON:0002616!1.27e-13!59;UBERON:0002780!1.48e-13!41;UBERON:0001890!1.48e-13!41;UBERON:0006240!1.48e-13!41;UBERON:0003080!6.58e-13!42;UBERON:0005743!1.14e-12!86;UBERON:0001017!1.55e-12!82;UBERON:0000073!4.53e-12!94;UBERON:0001016!4.53e-12!94;UBERON:0002020!5.83e-12!34;UBERON:0003528!5.83e-12!34;UBERON:0000955!6.70e-12!69;UBERON:0006238!6.70e-12!69;UBERON:0001893!2.03e-11!34;UBERON:0002791!5.88e-11!33;UBERON:0001869!8.87e-11!32;UBERON:0003075!2.15e-10!86;UBERON:0007284!2.15e-10!86;UBERON:0002346!1.43e-09!90;UBERON:0000153!1.88e-09!129;UBERON:0007811!1.88e-09!129;UBERON:0000033!4.74e-09!123;UBERON:0002619!6.83e-09!22;UBERON:0003056!8.60e-08!61;UBERON:0004121!1.12e-07!169;UBERON:0001950!1.24e-07!20;UBERON:0000924!2.90e-07!173;UBERON:0006601!2.90e-07!173;UBERON:0002308!3.44e-07!9;UBERON:0000125!3.44e-07!9;UBERON:0000956!5.30e-07!25;UBERON:0000203!5.30e-07!25;UBERON:0000062!7.51e-07!511 | |ontology_enrichment_uberon=UBERON:0007023!6.41e-19!115;UBERON:0001049!4.90e-16!57;UBERON:0005068!4.90e-16!57;UBERON:0006241!4.90e-16!57;UBERON:0007135!4.90e-16!57;UBERON:0002616!1.27e-13!59;UBERON:0002780!1.48e-13!41;UBERON:0001890!1.48e-13!41;UBERON:0006240!1.48e-13!41;UBERON:0003080!6.58e-13!42;UBERON:0005743!1.14e-12!86;UBERON:0001017!1.55e-12!82;UBERON:0000073!4.53e-12!94;UBERON:0001016!4.53e-12!94;UBERON:0002020!5.83e-12!34;UBERON:0003528!5.83e-12!34;UBERON:0000955!6.70e-12!69;UBERON:0006238!6.70e-12!69;UBERON:0001893!2.03e-11!34;UBERON:0002791!5.88e-11!33;UBERON:0001869!8.87e-11!32;UBERON:0003075!2.15e-10!86;UBERON:0007284!2.15e-10!86;UBERON:0002346!1.43e-09!90;UBERON:0000153!1.88e-09!129;UBERON:0007811!1.88e-09!129;UBERON:0000033!4.74e-09!123;UBERON:0002619!6.83e-09!22;UBERON:0003056!8.60e-08!61;UBERON:0004121!1.12e-07!169;UBERON:0001950!1.24e-07!20;UBERON:0000924!2.90e-07!173;UBERON:0006601!2.90e-07!173;UBERON:0002308!3.44e-07!9;UBERON:0000125!3.44e-07!9;UBERON:0000956!5.30e-07!25;UBERON:0000203!5.30e-07!25;UBERON:0000062!7.51e-07!511 | ||
|ontology_enrichment_uberon_v019=UBERON:0003296;2.08e-16;4!UBERON:0010133;2.08e-16;4!UBERON:0000007;6.34e-15;2!UBERON:0002148;1.46e-14;2!UBERON:0006331;1.46e-14;2!UBERON:0009662;1.46e-14;2!UBERON:0002298;9.22e-11;6!UBERON:0000988;5.17e-10;3!UBERON:0001894;1.34e-09;7!UBERON:0004733;2.99e-09;12!UBERON:0002028;2.99e-09;12!UBERON:0000473;9.52e-09;8!UBERON:0004732;1.51e-08;13!UBERON:0000998;1.69e-08;1!UBERON:0006868;1.69e-08;1!UBERON:0001882;3.96e-08;1!UBERON:0007195;3.96e-08;1!UBERON:0004911;3.96e-08;1!UBERON:0005403;3.96e-08;1!UBERON:0002680;2.47e-07;9!UBERON:0000125;2.47e-07;9!UBERON:0002308;2.47e-07;9!UBERON:0001895;2.47e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,2.14e-16,4;UBERON:0010133,2.14e-16,4;UBERON:0000007,7.84e-15,2;UBERON:0002148,1.47e-14,2;UBERON:0006331,1.47e-14,2;UBERON:0009662,1.47e-14,2;UBERON:0002298,8.49e-11,6;UBERON:0000988,5.18e-10,3;UBERON:0001894,1.36e-09,7;UBERON:0006222,1.36e-09,7;UBERON:0004733,2.51e-09,12;UBERON:0002028,2.51e-09,12;UBERON:0007277,2.51e-09,12;UBERON:0000073,6.99e-09,53;UBERON:0002616,6.99e-09,53;UBERON:0000473,9.66e-09,8;UBERON:0004732,1.28e-08,13;UBERON:0000998,1.75e-08,1;UBERON:0006868,1.75e-08,1;UBERON:0001049,2.42e-08,56;UBERON:0005068,2.42e-08,56;UBERON:0006241,2.42e-08,56;UBERON:0007135,2.42e-08,56;UBERON:0004911,3.57e-08,1;UBERON:0001882,5.07e-08,1;UBERON:0005403,5.07e-08,1;UBERON:0007195,5.82e-08,1;UBERON:0003076,1.75e-07,15;UBERON:0003057,1.75e-07,15;UBERON:0002680,2.19e-07,9;UBERON:0001895,2.19e-07,9;UBERON:0010092,2.19e-07,9;UBERON:0000125,2.67e-07,9;UBERON:0002308,2.67e-07,9 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0.0787107813136792,0,0.383829398097213,0.619264493264304,0,0,0,0,0,0.293600439334847,0,0,0,0.223915474239924,0,0,0,0.377875943688809,0,0.232429036905685,0,0,0,0,0,0,0.645484683583826,0,0,0.272906150057846,0,0,0,0,0,0,0.426224750532694,0.580418477257168,0,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0.209658645508376,0.336985893439485,0,0,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,5.76307932189936,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0.81014194788176,0.357198913136319,0,0.225222960966644,0,0,0.183201743930407,0,3.87780264148325,0,0,0.12663051166458,0.794455084879313,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0.554128230968366,0,0.30648779579902,0,0,0.179389635688862,0,0.423863802319124,0,0.309157587715317,0.257640540045629,0.37223371266318,0.337552664482532,0,0.252433774244115,0,0.484938170456436,0,0.10075209822764,0,0.193260853163297,0.272746120590835,0.286804595389004,0.487894824518382,0.662648841607426,0.232387885739037,0.10366105501537,0,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.234817388471643,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0.16798212819886,0.141775097242386,0,0,0,0,0.264145302039678,3.7319060797339,2.30591925467138,2.01987893482208,0.063497894292169,0,0,0,0.102827492703324,0,0.285826432630578,0.336393253036082,0,0,0,0,0,0,0,0.514414748524284,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0.215627574859517,0.513372145118994,0,0,0,0.335032530668698,0,1.49801404789436,0,0.828831026872071,0,0,0,0.415941723061614,0,0.315404830067869,0.117141414992713,0,0,1.03473071292505,0,0,0.0868836144680828,0,0.343143423810856,0.206768026122887,0.431428401637234,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.512556597022804,0,0.321707842287215,0,0,0,0.0821271560138091,0,0,0.362578348774867,0,0.0920809889358963,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0.206082023295445,0,0.082509499920588,0,0,0,0,0,0,0.137836572484531,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.127612712494584,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0.42793898803392,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0.196498082026242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0.106824071127473,0,0,0,0.144269212976445,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0.23874448473769,0.593929361665277,0.307160702099232,0,0.422008249231538,0.333926115068718,0,0.211125408127993,0.796991953004279,0.828851746593443,0.251932747854276,0.102268682502155,0,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0,0.278304294485554,0,0,0.0874599999961957,0,0.1137934482855,0,0,0,0,0.347249989866585,0.885741385813839,0.723578631752448,1.52581736317083,0.552896299656123,0.295547618953547,0.219385397153973,0,0.139423744278603,0.153900517007594,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.158936578980379,0,0.326465616318295,0.282706142867882,0.216388639742091,0,0.265372693510018,0,0.296521128680622,0,0,0.337005664903385,0,0.234264445725339,0,0.19566461893209,0.242780379534093,0.394584402849391,1.20990716048664,0.91821828489147,0.568679216656392,0.60129367765797,0.207376382794494,0.664653872707185,0.330991955875499,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.290967049465258,0,0.677942222341597,0,0,0.823040347426423,0.586654148204409,0.240476460754601,0.213452994739353,0,0,0,0.686379991447858,0,0,0.235694034616795,0,0.104602846312333,0.101998217636322,0,0.600420288709789,0.410716136675979,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0,0.798716001995964,0,0.446342914883745,0.403100834920358,0.360299883542404,0,0.0787831823072236,0,0,0,0,0.795229689809303,0.953423842781029,0.160753148465019,0,0.415440338029185,0.674921674654501,0.77380195455795,0.850493793212345,0,0.315222829196793,0.419636705079985,0.211200673038813,0.179287339332845,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0.082092520749339,0.340776043570843,0.113312091520126,0,0,1.68067843270016,1.05786081394152,0.171086837884329,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| ||
|short_description=p5@UBN2 | |short_description=p5@UBN2 | ||
}} | }} |
Latest revision as of 15:57, 16 September 2015
Short description: | p5@UBN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_UBN2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 198bp_to_ENST00000288561_5end |
EntrezGene: | UBN2 |
HGNC: | 21931 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.69e-13 | 5 |
basophil mast progenitor cell | 1.69e-13 | 5 |
serous secreting cell | 3.57e-08 | 1 |
endocrine cell | 1.04e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gland of diencephalon | 2.14e-16 | 4 |
neuroendocrine gland | 2.14e-16 | 4 |
pituitary gland | 7.84e-15 | 2 |
locus ceruleus | 1.47e-14 | 2 |
brainstem nucleus | 1.47e-14 | 2 |
hindbrain nucleus | 1.47e-14 | 2 |
brainstem | 8.49e-11 | 6 |
pons | 5.18e-10 | 3 |
diencephalon | 1.36e-09 | 7 |
future diencephalon | 1.36e-09 | 7 |
segmental subdivision of hindbrain | 2.51e-09 | 12 |
hindbrain | 2.51e-09 | 12 |
presumptive hindbrain | 2.51e-09 | 12 |
regional part of nervous system | 6.99e-09 | 53 |
regional part of brain | 6.99e-09 | 53 |
testis | 9.66e-09 | 8 |
segmental subdivision of nervous system | 1.28e-08 | 13 |
seminal vesicle | 1.75e-08 | 1 |
seminal fluid secreting gland | 1.75e-08 | 1 |
neural tube | 2.42e-08 | 56 |
neural rod | 2.42e-08 | 56 |
future spinal cord | 2.42e-08 | 56 |
neural keel | 2.42e-08 | 56 |
epithelium of female gonad | 3.57e-08 | 1 |
nucleus accumbens | 5.07e-08 | 1 |
ventral striatum | 5.07e-08 | 1 |
stroma of bone marrow | 5.82e-08 | 1 |
posterior neural tube | 1.75e-07 | 15 |
chordal neural plate | 1.75e-07 | 15 |
regional part of metencephalon | 2.19e-07 | 9 |
metencephalon | 2.19e-07 | 9 |
future metencephalon | 2.19e-07 | 9 |
neural nucleus | 2.67e-07 | 9 |
nucleus of brain | 2.67e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 3.57e-08 | 1 |