FFCP PHASE1:Hg19::chr7:35734583..35734592,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64224 | |EntrezGene=64224 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21915 | |HGNC=21915 | ||
|TSSclassifier=strong | |||
|UniProt=C9JV48 | |UniProt=C9JV48 | ||
|association_with_transcript=40bp_to_ENST00000427455_5end | |association_with_transcript=40bp_to_ENST00000427455_5end | ||
|cluster_id=chr7:35734583..35734592,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_10_at_HERPUD2_5end | |description=CAGE_peak_10_at_HERPUD2_5end | ||
|id=chr7:35734583..35734592,- | |id=chr7:35734583..35734592,- | ||
|ontology_enrichment_celltype=CL:0000860!5.76e-19!45;CL:0002057!3.40e-18!42;CL:0000766!6.49e-18!76;CL:0002009!7.87e-16!65;CL:0002194!3.94e-15!63;CL:0000576!3.94e-15!63;CL:0000040!3.94e-15!63;CL:0000559!3.94e-15!63;CL:0000557!7.18e-15!71;CL:0000839!1.30e-13!70;CL:0000738!5.88e-09!140;CL:0000763!3.78e-08!112;CL:0000049!3.78e-08!112;CL:0002087!1.50e-07!119;CL:0002031!6.55e-07!124 | |ontology_enrichment_celltype=CL:0000860!5.76e-19!45;CL:0002057!3.40e-18!42;CL:0000766!6.49e-18!76;CL:0002009!7.87e-16!65;CL:0002194!3.94e-15!63;CL:0000576!3.94e-15!63;CL:0000040!3.94e-15!63;CL:0000559!3.94e-15!63;CL:0000557!7.18e-15!71;CL:0000839!1.30e-13!70;CL:0000738!5.88e-09!140;CL:0000763!3.78e-08!112;CL:0000049!3.78e-08!112;CL:0002087!1.50e-07!119;CL:0002031!6.55e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.97e-33;33!CL:0002057;2.97e-33;33!CL:0000473;4.25e-23;39!CL:0000234;4.25e-23;39!CL:0000576;2.82e-22;48!CL:0000766;6.05e-16;69!CL:0000094;3.32e-10;8!CL:0000763;7.59e-08;100!CL:0000081;3.69e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.41e-40,42;CL:0002057,7.41e-40,42;CL:0000766,7.76e-36,72;CL:0000473,1.12e-33,48;CL:0000234,1.12e-33,48;CL:0002194,3.77e-31,59;CL:0000576,3.77e-31,59;CL:0000040,3.77e-31,59;CL:0000559,3.77e-31,59;CL:0002009,8.17e-30,61;CL:0000839,7.91e-27,66;CL:0000557,2.76e-26,67;CL:0000763,2.16e-21,108;CL:0000049,2.16e-21,108;CL:0000738,1.25e-18,136;CL:0002087,2.69e-16,115;CL:0002031,4.08e-14,120;CL:0002032,7.75e-14,161;CL:0000837,7.75e-14,161;CL:0000037,1.16e-13,168;CL:0000988,4.23e-13,177;CL:0000094,4.66e-10,8;CL:0000081,4.66e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-29;42!CL:0000049;1.73e-08;108 | |||
|ontology_enrichment_disease=DOID:305!2.23e-07!106 | |ontology_enrichment_disease=DOID:305!2.23e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.68e-12!80;UBERON:0001474!8.72e-11!86;UBERON:0002405!2.25e-10!115;UBERON:0004765!1.05e-09!101;UBERON:0001434!1.05e-09!101;UBERON:0000062!1.47e-09!511;UBERON:0002390!1.60e-09!102;UBERON:0003061!1.60e-09!102;UBERON:0002193!6.40e-08!112 | |ontology_enrichment_uberon=UBERON:0002371!4.68e-12!80;UBERON:0001474!8.72e-11!86;UBERON:0002405!2.25e-10!115;UBERON:0004765!1.05e-09!101;UBERON:0001434!1.05e-09!101;UBERON:0000062!1.47e-09!511;UBERON:0002390!1.60e-09!102;UBERON:0003061!1.60e-09!102;UBERON:0002193!6.40e-08!112 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.78e-23,76;UBERON:0001474,1.51e-22,82;UBERON:0002390,7.67e-20,98;UBERON:0003061,7.67e-20,98;UBERON:0004765,1.17e-19,90;UBERON:0002405,2.02e-17,93;UBERON:0002193,4.80e-17,108;UBERON:0001434,1.04e-16,100;UBERON:0003081,2.02e-08,203;UBERON:0002204,3.13e-08,167 | |||
|phase1_expression=0,0.642301571672949,0.281908808191942,0,0.446961094427288,0,2.53299878168311,0,0,0.737201809504527,0.697801167972428,0.436882744260345,0.263766978228454,0.37129905888014,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0,0.286235987131057,0.547497700291537,0.125542639594803,0.0764134057479513,0.164201178899891,0.314843125254717,2.36018566109342,0.767658796194425,1.08371286321253,0,0,0.369754010166788,0,0.142169232487422,0,1.10799081706375,1.80490002723128,1.08505435357926,0,0,0.257575567634187,4.79814187972564,3.77875943688809,1.21292030593908,3.48643555358527,3.28934310417461,0.929119112685311,4.31538588483226,6.40401766322752,0.236482229888585,5.5159308917859,1.29096936716765,1.35426486594342,3.9530891303947,4.09359225086769,0.224723484445085,3.67300670845083,3.53021929783703,0,5.60747210317417,8.7764009353518,4.26224750532694,5.80418477257168,3.97169657283798,0.622822248995575,4.27122730936464,6.25779502104242,0.868755378820466,1.21079900526674,1.47311054395026,0,0.633765858935825,1.91343869968539,0,1.46027220490444,1.20141514273205,0.32145117339416,0.285012743741249,1.19350006319454,0.730656615058536,0,0.546138611262131,0,0.426730222566507,0,0,0,0.954053754535364,0,1.17447437874188,0.764546456250458,0,0,0,0.393419540227666,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,0,0.130059347559878,0.164437904603676,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20964045934839,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0.443458794925128,0.175669571386252,0.261958150995425,0,0,3.57002133020152,2.61194605948901,1.06366368415092,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0.367663080345869,0,0.0892997282840798,0,0.112611480483322,0,0,0,15.8136500923276,27.1446184903828,0,0.496971951695318,0.12663051166458,0.132409180813219,1.14734648299525,0.354668382198357,0.560677600142307,0,0.49333509683432,0.622422070799533,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0,0.896692083310806,0,0.161872944368132,0.140450806702248,0,0.122834317311768,0,0,0.494533858557114,0,0,0.168336113954066,0.250237039743928,0,0,0,0,0.113432183160021,0.179389635688862,0.213557388818567,0.211931901159562,0.600182192168805,0.103052529238439,0.515281080091258,0.37223371266318,0.506328996723799,0.292311015483596,0,0.276149695926898,0,0,0,0.169560592310488,0.57978255948989,0.545492241181669,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0.591534000199219,0,0,0.441175890929576,0.217879444092406,0.474541238222193,0.404493924480493,0.392442930250692,0,0.738155454624648,0,0,1.47008711385542,1.26755034821831,0,2.36315962672562,0,0.737930631258681,0,0.219500570817251,0,0,0,0.325808305310325,0,0,0.115930404975077,0.352226082707465,0.144366447761074,0,0,0,0,0,0.702012795417713,0.743155811443641,0.93733833986777,0.503946384596579,0.567100388969546,0.626909658919938,0.581267877027924,0,0.492663237895943,0.088048434013226,0,0.432359860250884,0.50496973370552,0,0.381988425558278,0,0,0,0.300343057843917,0,0.224262168690721,0.87192013766656,0.1466765716419,0.646358578788889,0,0,0,1.04007436911366,0,0,0.266422179016099,0.857867961948885,0,0,0.325736184293735,0,0,0,0,0.599837947092342,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.224170287987055,0.788123040807709,0.215627574859517,0.513372145118994,0,0,0,0,0,23.2192177423627,0,4.14415513436035,0.736148950314839,0,0.271265023699736,0,0.356857977594324,0.315404830067869,0,0,0,1.03473071292505,0.664225598535437,0,0.173767228936166,0.195801157462741,0,0.413536052245775,2.15714200818617,0.74709290462411,0.303127571446259,0,0.604780586659361,0,0.153461973288062,1.12264037773229,0,0,0.321707842287215,0,0.308419387605311,0,0.0821271560138091,0,0.232420756919918,0.846016147141356,0.802025881213139,0.828728900423067,0,0.182091168006717,0.131124414959424,0,0.231046011313244,0,1.46139224653261,0.211103257785751,0,0,0,1.54227252690289,0.270946437543853,1.00337954770971,0.509752546090077,0,0.447749509444357,0,0,0.256450125116389,0.328014645699706,1.30151357865721,1.23649213977267,0,0,0,0,3.21367859688319,0.096670718292122,0,0.614014698904518,0.137836572484531,0.537101224341368,0,0.170453254832202,0.0890320356467374,0.826424576804891,1.34533047155574,0.255225424989168,0.809262246844399,0,0,0,0,0.532306030317022,0,0,0.143124886741991,0,0,0.953150969619124,0,0,0,0.78494864019923,1.97859703341646,0.54907405947211,0.117812402345686,0,0,0.421258456238981,0,0,0,0.136499911407986,1.1312434556297,0,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,1.22386941009813,0,0,0,0.459446800413919,0.507447609232169,0,0,1.66762242820452,1.23408681925858,0,0,0,0.534120355637366,0,0.245040215981032,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0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|short_description=p10@HERPUD2 | |short_description=p10@HERPUD2 | ||
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Latest revision as of 09:20, 18 September 2015
Short description: | p10@HERPUD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_HERPUD2_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 40bp_to_ENST00000427455_5end |
EntrezGene: | HERPUD2 |
HGNC: | 21915 |
UniProt: | C9JV48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.41e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.41e-40 | 42 |
myeloid leukocyte | 7.76e-36 | 72 |
defensive cell | 1.12e-33 | 48 |
phagocyte | 1.12e-33 | 48 |
monopoietic cell | 3.77e-31 | 59 |
monocyte | 3.77e-31 | 59 |
monoblast | 3.77e-31 | 59 |
promonocyte | 3.77e-31 | 59 |
macrophage dendritic cell progenitor | 8.17e-30 | 61 |
myeloid lineage restricted progenitor cell | 7.91e-27 | 66 |
granulocyte monocyte progenitor cell | 2.76e-26 | 67 |
myeloid cell | 2.16e-21 | 108 |
common myeloid progenitor | 2.16e-21 | 108 |
leukocyte | 1.25e-18 | 136 |
nongranular leukocyte | 2.69e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 4.08e-14 | 120 |
hematopoietic oligopotent progenitor cell | 7.75e-14 | 161 |
hematopoietic multipotent progenitor cell | 7.75e-14 | 161 |
hematopoietic stem cell | 1.16e-13 | 168 |
hematopoietic cell | 4.23e-13 | 177 |
granulocyte | 4.66e-10 | 8 |
blood cell | 4.66e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.78e-23 | 76 |
bone element | 1.51e-22 | 82 |
hematopoietic system | 7.67e-20 | 98 |
blood island | 7.67e-20 | 98 |
skeletal element | 1.17e-19 | 90 |
immune system | 2.02e-17 | 93 |
hemolymphoid system | 4.80e-17 | 108 |
skeletal system | 1.04e-16 | 100 |
lateral plate mesoderm | 2.02e-08 | 203 |
musculoskeletal system | 3.13e-08 | 167 |