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{{UBERON
{{UBERON
|id=UBERON:0004770
|alt_id=
|name=articular system
|anatomical_img_id=FMA:23878
|namespace=
|def="Anatomical system that consists of all the joints of the body." [VSAO:0000181]
|xref=FMA:23878;;MA:0003007;;SCTID:361827000;;VSAO:0000181
|is_a=UBERON:0000467
|synonym="joint system" EXACT [FMA:23878];;"set of all joints" RELATED [];;"set of all joints of body" EXACT [FMA:23878]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Anatomical system that consists of all the joints of the body." [VSAO:0000181]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0004770
|is_a=UBERON:0000467 ;;UBERON:0000477
|is_obsolete=
|located_in=
|located_in=
|part_of=
|name=articular system
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001434
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="joint system" EXACT [FMA:23878];;"set of all joints" RELATED [];;"set of all joints of body" EXACT [FMA:23878]
|union_of=
|xref=FMA:23878;;MA:0003007;;SCTID:361827000;;VSAO:0000181
}}
}}

Latest revision as of 17:48, 12 September 2014

Name:articular system
Namespace:FANTOM
Definition:"Anatomical system that consists of all the joints of the body." [VSAO:0000181]
Xrefs:
links:

FMA:23878
MA:0003007
SCTID:361827000

VSAO:0000181
Synonyms: "joint system" EXACT [FMA:23878]
"set of all joints" RELATED []
"set of all joints of body" EXACT [FMA:23878]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000467(anatomical system),UBERON:0000477(anatomical cluster)
part_of:UBERON:0001434(skeletal system)



Children

disjoint from:UBERON:0004288 (skeleton)
part of:UBERON:0000982 (skeletal joint),UBERON:0004905 (articulation)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004770 (articular system), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.05e-102FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_8fb33d8a9e004fb30db71adc97b7e370p@chr3:174737010..174737023, +
5.05e-102FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_8fb33d8a9e004fb30db71adc97b7e370p@chr3:174737010..174737023, +
6.68e-88FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_2a0f96777b9b0438750f48caf76b313bp4@PAX1
6.68e-88FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_2a0f96777b9b0438750f48caf76b313bp4@PAX1
5.7e-81FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_0c6d11e0c78536bf0083e34f7ea08934p15@SNED1
5.7e-81FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_0c6d11e0c78536bf0083e34f7ea08934p15@SNED1
3.87e-62FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_e23d979295193059c40229cd35c51d46p@chr5:30104176..30104187, -
3.87e-62FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_e23d979295193059c40229cd35c51d46p@chr5:30104176..30104187, -
5.39e-52FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_3f72f356f5c2c3da0afe05e28c712595p1@ENST00000436845
5.39e-52FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_3f72f356f5c2c3da0afe05e28c712595p1@ENST00000436845
5.25e-50FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_97e2e91c4c4d2a2e7ed17b690c25e679p6@SIX4
5.25e-50FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_97e2e91c4c4d2a2e7ed17b690c25e679p6@SIX4
1.71e-49FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_85600ff58e4a0e9ea20dbfa4f075ee58p4@NKX3-2
1.71e-49FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_85600ff58e4a0e9ea20dbfa4f075ee58p4@NKX3-2
4.01e-47FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_ed3707da8b53145eb0b54710afde1b73p@chr5:140887761..140887777, +
4.01e-47FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_ed3707da8b53145eb0b54710afde1b73p@chr5:140887761..140887777, +
3.73e-45FFCP PHASE1:Hg19::chr2:242009429..242009432,+#_01a721db5315fc8920e4430b37dde8a0p@chr2:242009429..242009432, +
3.73e-45FFCP PHASE2:Hg19::chr2:242009429..242009432,+#_01a721db5315fc8920e4430b37dde8a0p@chr2:242009429..242009432, +
5.04e-45FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_2e3bbddf85a06c41347f0220e21e3df9p@chr9:114135497..114135526, -
5.04e-45FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_2e3bbddf85a06c41347f0220e21e3df9p@chr9:114135497..114135526, -
1.45e-44FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_02d92bb26704c68158e6cada8f8eecd4p@chr2:241897125..241897142, -
1.45e-44FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_02d92bb26704c68158e6cada8f8eecd4p@chr2:241897125..241897142, -
5.55e-44FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_c57fa1384db29ddadaca9c263f911f92p@chr3:80727046..80727051, -
5.55e-44FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_c57fa1384db29ddadaca9c263f911f92p@chr3:80727046..80727051, -
5.66e-42FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_9bb02e095725779f626b605d07965b4bp@chr7:100202784..100202796, -
5.66e-42FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_9bb02e095725779f626b605d07965b4bp@chr7:100202784..100202796, -
9.63e-42FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_fd8bb16820f0b5478f8010cf7baded1dp20@CAPZB
9.63e-42FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_fd8bb16820f0b5478f8010cf7baded1dp20@CAPZB
2.13e-39FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_5afa36eb2d803636590c3fc2690be943p@chr1:19778678..19778689, -
2.13e-39FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_5afa36eb2d803636590c3fc2690be943p@chr1:19778678..19778689, -
1.04e-37FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_b2679799224fa1e5d198958f94ad2032p@chr2:241897189..241897221, -
1.04e-37FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_b2679799224fa1e5d198958f94ad2032p@chr2:241897189..241897221, -
1.51e-37FFCP PHASE2:Hg19::chr2:241987807..241987808,+#_49340f08a45e8f92758e29fbd3438d4fp22@SNED1
1.51e-37FFCP PHASE1:Hg19::chr2:241987807..241987808,+#_49340f08a45e8f92758e29fbd3438d4fp22@SNED1
3.4e-36FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_8044fe1dfe595cb15b5fcb0f27cf5e9cp1@uc010aki.1
3.4e-36FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_8044fe1dfe595cb15b5fcb0f27cf5e9cp1@uc010aki.1
6.5e-34FFCP PHASE1:Hg19::chr7:80546293..80546302,-#_9354a5f5e54792be906fc9f29f51e99fp31@SEMA3C
6.5e-34FFCP PHASE2:Hg19::chr7:80546293..80546302,-#_9354a5f5e54792be906fc9f29f51e99fp31@SEMA3C
9.08e-34FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_4651b65fc544af9f6110b98b8240a1a1p3@uc010aki.1
9.08e-34FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_4651b65fc544af9f6110b98b8240a1a1p3@uc010aki.1
1.15e-32FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_cfa3b77e5e2fd3716a4cf60543d8c296p3@PAX1
1.15e-32FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_cfa3b77e5e2fd3716a4cf60543d8c296p3@PAX1
1.77e-32FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_5670a9657894d5222a23b71f2c205011p@chr10:81923378..81923389, -
1.77e-32FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_5670a9657894d5222a23b71f2c205011p@chr10:81923378..81923389, -
2.19e-32FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_487a9594f68e790af83c3981dfcf7a6ep@chr2:12248310..12248334, -
2.19e-32FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_487a9594f68e790af83c3981dfcf7a6ep@chr2:12248310..12248334, -
8.44e-32FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_05620b785936dd7aa6eae3fd87d6cdcep19@HDAC9
8.44e-32FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_05620b785936dd7aa6eae3fd87d6cdcep19@HDAC9
3.34e-31FFCP PHASE1:Hg19::chr20:43343610..43343645,+#_c30e28263318cbcdcde73426f6e33232p5@WISP2
3.34e-31FFCP PHASE2:Hg19::chr20:43343610..43343645,+#_c30e28263318cbcdcde73426f6e33232p5@WISP2
1.1e-30FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_8cbda5fc851724b56b18b879f478b58ep@chr7:158224707..158224729, -
1.1e-30FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_8cbda5fc851724b56b18b879f478b58ep@chr7:158224707..158224729, -
4.93e-30FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_3cf6b37bdfa3b4d350e2661fdcad8b05p@chr1:65888177..65888194, +
4.93e-30FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_3cf6b37bdfa3b4d350e2661fdcad8b05p@chr1:65888177..65888194, +
1.3e-29FFCP PHASE1:Hg19::chr2:241937787..241937803,+#_d76f9de46735c8f213a4875717f9f07bp5@SNED1
1.3e-29FFCP PHASE2:Hg19::chr2:241937787..241937803,+#_d76f9de46735c8f213a4875717f9f07bp5@SNED1
6.39e-29FFCP PHASE1:Hg19::chr17:38613285..38613298,-#_aecc6c230c06b3bc8e7e10f600207622p@chr17:38613285..38613298, -
6.39e-29FFCP PHASE2:Hg19::chr17:38613285..38613298,-#_aecc6c230c06b3bc8e7e10f600207622p@chr17:38613285..38613298, -
6.71e-29FFCP PHASE1:Hg19::chr9:113798560..113798572,-#_8b1b4ee5bc1e59e1ef5a73918bba5bf0p34@LPAR1
6.71e-29FFCP PHASE2:Hg19::chr9:113798560..113798572,-#_8b1b4ee5bc1e59e1ef5a73918bba5bf0p34@LPAR1
1.23e-28FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_f8968bfdc09edd66fd6d32c629e0fd8fp3@NKX3-2
1.23e-28FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_f8968bfdc09edd66fd6d32c629e0fd8fp3@NKX3-2
1.72e-28FFCP PHASE1:Hg19::chr20:43343596..43343608,+#_b18d63485f2b87fc81e9fa92ece499aep6@WISP2
1.72e-28FFCP PHASE2:Hg19::chr20:43343596..43343608,+#_b18d63485f2b87fc81e9fa92ece499aep6@WISP2
1.13e-27FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_0dfc85178598b47996e20fadf62bd6c0p1@MGC27382
1.13e-27FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_0dfc85178598b47996e20fadf62bd6c0p1@MGC27382
3.37e-27FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_5f527a178ead1cf307306afdfc8ffdc2p18@HDAC9
3.37e-27FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_5f527a178ead1cf307306afdfc8ffdc2p18@HDAC9
9.5e-27FFCP PHASE1:Hg19::chr8:25337491..25337504,+#_f348a2a5472d8a25cf48dc2a1bd97f3ep@chr8:25337491..25337504, +
9.5e-27FFCP PHASE2:Hg19::chr8:25337491..25337504,+#_f348a2a5472d8a25cf48dc2a1bd97f3ep@chr8:25337491..25337504, +
2.17e-26FFCP PHASE1:Hg19::chr14:61113228..61113233,-#_d410c753723a6557959f9857e0089e39p@chr14:61113228..61113233, -
2.17e-26FFCP PHASE2:Hg19::chr14:61113228..61113233,-#_d410c753723a6557959f9857e0089e39p@chr14:61113228..61113233, -
5.22e-26FFCP PHASE1:Hg19::chr1:172134667..172134711,+#_242eb124e00e8ba8391f484dacea703cp@chr1:172134667..172134711, +
5.22e-26FFCP PHASE2:Hg19::chr1:172134667..172134711,+#_242eb124e00e8ba8391f484dacea703cp@chr1:172134667..172134711, +
5.22e-26FFCP PHASE1:Hg19::chr1:172134736..172134739,+#_242eb124e00e8ba8391f484dacea703cp@chr1:172134736..172134739, +
5.22e-26FFCP PHASE1:Hg19::chr12:130786785..130786827,-#_242eb124e00e8ba8391f484dacea703cp@chr12:130786785..130786827, -
5.22e-26FFCP PHASE2:Hg19::chr12:130786785..130786827,-#_242eb124e00e8ba8391f484dacea703cp@chr12:130786785..130786827, -
5.22e-26FFCP PHASE2:Hg19::chr1:172134736..172134739,+#_242eb124e00e8ba8391f484dacea703cp@chr1:172134736..172134739, +
5.22e-26FFCP PHASE1:Hg19::chr1:172134755..172134764,+#_242eb124e00e8ba8391f484dacea703cp@chr1:172134755..172134764, +
5.22e-26FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_242eb124e00e8ba8391f484dacea703cp@chr9:33028063..33028067, -
5.22e-26FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_242eb124e00e8ba8391f484dacea703cp@chr13:24914614..24914622, -
5.22e-26FFCP PHASE1:Hg19::chr15:68117826..68117829,+#_242eb124e00e8ba8391f484dacea703cp9@SKOR1
5.22e-26FFCP PHASE1:Hg19::chr2:181751144..181751146,+#_242eb124e00e8ba8391f484dacea703cp@chr2:181751144..181751146, +
5.22e-26FFCP PHASE2:Hg19::chr1:172134755..172134764,+#_242eb124e00e8ba8391f484dacea703cp@chr1:172134755..172134764, +
5.22e-26FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_242eb124e00e8ba8391f484dacea703cp@chr13:24914614..24914622, -
5.22e-26FFCP PHASE1:Hg19::chr8:37411632..37411639,-#_242eb124e00e8ba8391f484dacea703cp1@ENST00000517363
5.22e-26FFCP PHASE2:Hg19::chr15:68117826..68117829,+#_242eb124e00e8ba8391f484dacea703cp9@SKOR1
5.22e-26FFCP PHASE2:Hg19::chr2:181751144..181751146,+#_242eb124e00e8ba8391f484dacea703cp@chr2:181751144..181751146, +
5.22e-26FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_242eb124e00e8ba8391f484dacea703cp@chr9:33028063..33028067, -
5.22e-26FFCP PHASE2:Hg19::chr8:37411632..37411639,-#_242eb124e00e8ba8391f484dacea703cp1@ENST00000517363
8.65e-26FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_1cf85b0a588b845f5e7da31aadf580a0p5@PTGFR
8.65e-26FFCP PHASE2:Hg19::chr18:22150956..22150983,+#_1cf85b0a588b845f5e7da31aadf580a0p@chr18:22150956..22150983, +
8.65e-26FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_1cf85b0a588b845f5e7da31aadf580a0p5@PTGFR
8.65e-26FFCP PHASE1:Hg19::chr18:22150956..22150983,+#_1cf85b0a588b845f5e7da31aadf580a0p@chr18:22150956..22150983, +
9.05e-26FFCP PHASE2:Hg19::chr6:1626414..1626429,-#_aaff97b1563c259a094f6f323931d98fp7@GMDS
9.05e-26FFCP PHASE1:Hg19::chr6:1626414..1626429,-#_aaff97b1563c259a094f6f323931d98fp7@GMDS
1.44e-25FFCP PHASE2:Hg19::chr9:113798435..113798442,-#_de197fa607f73fd722d417f7f3b8c420p42@LPAR1
1.44e-25FFCP PHASE1:Hg19::chr9:113798435..113798442,-#_de197fa607f73fd722d417f7f3b8c420p42@LPAR1
1.56e-25FFCP PHASE1:Hg19::chr5:17743903..17743914,+#_95dce78527ece60734bfc70673da4cbfp@chr5:17743903..17743914, +
1.56e-25FFCP PHASE2:Hg19::chr5:17743903..17743914,+#_95dce78527ece60734bfc70673da4cbfp@chr5:17743903..17743914, +

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