UBERON:0011134: Difference between revisions
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|id=UBERON:0011134
|name=nonsynovial joint
|namespace=
|def="Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage with...") |
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
| | |def="Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage without an intervening synovial cavity. Examples: sagittal suture, inferior tibiofibular syndesmosis, costochondral joint, pubic symphysis." [FMA:7491] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0011134 | |||
|is_a=UBERON:0000982 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|name=nonsynovial joint | |||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of= | |part_of= | ||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset= | ||
| | |synonym="solid joint" EXACT [FMA:7491] | ||
|union_of= | |||
|xref=FMA:7491 | |||
}} | }} | ||
Latest revision as of 18:10, 12 September 2014
| Name: | nonsynovial joint | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "Joint in which the articulating bones or cartilages are connected by ligaments or fibrocartilage without an intervening synovial cavity. Examples: sagittal suture, inferior tibiofibular syndesmosis, costochondral joint, pubic symphysis." [FMA:7491] | ||
| Xrefs: |
| ||
| Synonyms: | "solid joint" EXACT [FMA:7491] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000982(skeletal joint) |
|---|
Children
| is a: | UBERON:0002209 (fibrous joint),UBERON:0002213 (cartilaginous joint) |
|---|---|
| disjoint from: | UBERON:0002217 (synovial joint) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11248-116E6 (Anulus Pulposus Cell, donor1)
- 11252-116F1 (Nucleus Pulposus Cell, donor1)
- 11409-118E5 (Nucleus Pulposus Cell, donor2)
- 11462-119B4 (Nucleus Pulposus Cell, donor3)
- 11463-119B5 (Anulus Pulposus Cell, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0011134 (nonsynovial joint), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.25e-162 | FFCP PHASE1:Hg19::chr3:174737010..174737023,+#_c7e4d0e54d57a97b17ba2af2e8f3f5f1 | p@chr3:174737010..174737023, + |
| 1.25e-162 | FFCP PHASE2:Hg19::chr3:174737010..174737023,+#_c7e4d0e54d57a97b17ba2af2e8f3f5f1 | p@chr3:174737010..174737023, + |
| 3.92e-140 | FFCP PHASE1:Hg19::chr20:21687193..21687206,+#_aef8dbbecd03c5f6143a764c7b2a7ac4 | p4@PAX1 |
| 3.92e-140 | FFCP PHASE2:Hg19::chr20:21687193..21687206,+#_aef8dbbecd03c5f6143a764c7b2a7ac4 | p4@PAX1 |
| 4.22e-99 | FFCP PHASE2:Hg19::chr5:30104176..30104187,-#_1a11385eb5bf8dc5912c3bb71b5c0e0c | p@chr5:30104176..30104187, - |
| 4.22e-99 | FFCP PHASE1:Hg19::chr5:30104176..30104187,-#_1a11385eb5bf8dc5912c3bb71b5c0e0c | p@chr5:30104176..30104187, - |
| 1.06e-78 | FFCP PHASE2:Hg19::chr4:13546130..13546145,-#_a930cb198c658634f6a947cebc1b8c1d | p4@NKX3-2 |
| 1.06e-78 | FFCP PHASE1:Hg19::chr4:13546130..13546145,-#_a930cb198c658634f6a947cebc1b8c1d | p4@NKX3-2 |
| 2.52e-71 | FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_715301bf80b1b7846d33f99b1e708556 | p@chr9:114135497..114135526, - |
| 2.52e-71 | FFCP PHASE1:Hg19::chr9:114135497..114135526,-#_715301bf80b1b7846d33f99b1e708556 | p@chr9:114135497..114135526, - |
| 7.4e-71 | FFCP PHASE1:Hg19::chr2:241897125..241897142,-#_5a8eb56d227f113c01db264760e4ca39 | p@chr2:241897125..241897142, - |
| 7.4e-71 | FFCP PHASE2:Hg19::chr2:241897125..241897142,-#_5a8eb56d227f113c01db264760e4ca39 | p@chr2:241897125..241897142, - |
| 6.33e-70 | FFCP PHASE1:Hg19::chr3:80727046..80727051,-#_ad5e5ae404efe19165d53cd65838125c | p@chr3:80727046..80727051, - |
| 6.33e-70 | FFCP PHASE2:Hg19::chr3:80727046..80727051,-#_ad5e5ae404efe19165d53cd65838125c | p@chr3:80727046..80727051, - |
| 4.8e-67 | FFCP PHASE1:Hg19::chr2:242004292..242004308,+#_60f24728c8eddb27ef754e5790c8f93d | p15@SNED1 |
| 4.8e-67 | FFCP PHASE2:Hg19::chr2:242004292..242004308,+#_60f24728c8eddb27ef754e5790c8f93d | p15@SNED1 |
| 1.24e-66 | FFCP PHASE1:Hg19::chr1:19811132..19811155,-#_7c2a9df0a088c36e38853aa29f64038c | p20@CAPZB |
| 1.24e-66 | FFCP PHASE2:Hg19::chr1:19811132..19811155,-#_7c2a9df0a088c36e38853aa29f64038c | p20@CAPZB |
| 1.26e-62 | FFCP PHASE1:Hg19::chr1:19778678..19778689,-#_eed81ade114f7f3e37f3e8c8578055fc | p@chr1:19778678..19778689, - |
| 1.26e-62 | FFCP PHASE2:Hg19::chr1:19778678..19778689,-#_eed81ade114f7f3e37f3e8c8578055fc | p@chr1:19778678..19778689, - |
| 1.1e-59 | FFCP PHASE1:Hg19::chr2:241897189..241897221,-#_bacc5201112f0284b58f4606647fc33c | p@chr2:241897189..241897221, - |
| 1.1e-59 | FFCP PHASE2:Hg19::chr2:241897189..241897221,-#_bacc5201112f0284b58f4606647fc33c | p@chr2:241897189..241897221, - |
| 1.55e-57 | FFCP PHASE1:Hg19::chr14:23574186..23574212,-#_5572f4f1a872b9f46b5a6037faa43717 | p1@uc010aki.1 |
| 1.55e-57 | FFCP PHASE2:Hg19::chr14:23574186..23574212,-#_5572f4f1a872b9f46b5a6037faa43717 | p1@uc010aki.1 |
| 4.09e-56 | FFCP PHASE1:Hg19::chr14:61190754..61190776,-#_d6920f584ffd383e814717a86fd9a1ed | p6@SIX4 |
| 4.09e-56 | FFCP PHASE2:Hg19::chr14:61190754..61190776,-#_d6920f584ffd383e814717a86fd9a1ed | p6@SIX4 |
| 3.74e-53 | FFCP PHASE1:Hg19::chr14:23574164..23574179,-#_09d795b68346d5c7dd8ea44b556d9899 | p3@uc010aki.1 |
| 3.74e-53 | FFCP PHASE2:Hg19::chr14:23574164..23574179,-#_09d795b68346d5c7dd8ea44b556d9899 | p3@uc010aki.1 |
| 1.15e-51 | FFCP PHASE1:Hg19::chr20:21687260..21687270,+#_8270ca172b5923aa07aed28abff10cdb | p3@PAX1 |
| 1.15e-51 | FFCP PHASE2:Hg19::chr20:21687260..21687270,+#_8270ca172b5923aa07aed28abff10cdb | p3@PAX1 |
| 2.3e-51 | FFCP PHASE2:Hg19::chr10:81923378..81923389,-#_3b157208c54ed9ad4a1dbddb71f88d70 | p@chr10:81923378..81923389, - |
| 2.3e-51 | FFCP PHASE1:Hg19::chr10:81923378..81923389,-#_3b157208c54ed9ad4a1dbddb71f88d70 | p@chr10:81923378..81923389, - |
| 3.24e-51 | FFCP PHASE2:Hg19::chr2:12248310..12248334,-#_1fcb274bf6be8605b854af2ef76c7791 | p@chr2:12248310..12248334, - |
| 3.24e-51 | FFCP PHASE1:Hg19::chr2:12248310..12248334,-#_1fcb274bf6be8605b854af2ef76c7791 | p@chr2:12248310..12248334, - |
| 8.0e-51 | FFCP PHASE2:Hg19::chr7:18832913..18832946,+#_b05809229d53062126243de8027e7f5f | p19@HDAC9 |
| 8.0e-51 | FFCP PHASE1:Hg19::chr7:18832913..18832946,+#_b05809229d53062126243de8027e7f5f | p19@HDAC9 |
| 5.06e-49 | FFCP PHASE1:Hg19::chr7:158224707..158224729,-#_5e2c10737756bb0e2215df01bd3e67a1 | p@chr7:158224707..158224729, - |
| 5.06e-49 | FFCP PHASE2:Hg19::chr7:158224707..158224729,-#_5e2c10737756bb0e2215df01bd3e67a1 | p@chr7:158224707..158224729, - |
| 5.24e-48 | FFCP PHASE1:Hg19::chr1:65888177..65888194,+#_2a3faf8a2e32ada030f013b8aa142e42 | p@chr1:65888177..65888194, + |
| 5.24e-48 | FFCP PHASE2:Hg19::chr1:65888177..65888194,+#_2a3faf8a2e32ada030f013b8aa142e42 | p@chr1:65888177..65888194, + |
| 2.98e-45 | FFCP PHASE2:Hg19::chr4:13546583..13546593,-#_9a0f7f3273f73cd971cc1a313026bebb | p3@NKX3-2 |
| 2.98e-45 | FFCP PHASE1:Hg19::chr4:13546583..13546593,-#_9a0f7f3273f73cd971cc1a313026bebb | p3@NKX3-2 |
| 2.92e-44 | FFCP PHASE1:Hg19::chr1:78695274..78695292,+#_61cb9af3d9df977870ab4b74b43cb673 | p1@MGC27382 |
| 2.92e-44 | FFCP PHASE2:Hg19::chr1:78695274..78695292,+#_61cb9af3d9df977870ab4b74b43cb673 | p1@MGC27382 |
| 1.71e-43 | FFCP PHASE1:Hg19::chr7:18832834..18832859,+#_f5bd75aefecbe07752a5bf23db5963c8 | p18@HDAC9 |
| 1.71e-43 | FFCP PHASE2:Hg19::chr7:18832834..18832859,+#_f5bd75aefecbe07752a5bf23db5963c8 | p18@HDAC9 |
| 1.48e-40 | FFCP PHASE1:Hg19::chr13:24914614..24914622,-#_455fa2c2d1995a9a8a7c5963170ad160 | p@chr13:24914614..24914622, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr13:24914614..24914622,-#_455fa2c2d1995a9a8a7c5963170ad160 | p@chr13:24914614..24914622, - |
| 1.48e-40 | FFCP PHASE2:Hg19::chr9:33028063..33028067,-#_455fa2c2d1995a9a8a7c5963170ad160 | p@chr9:33028063..33028067, - |
| 1.48e-40 | FFCP PHASE1:Hg19::chr9:33028063..33028067,-#_455fa2c2d1995a9a8a7c5963170ad160 | p@chr9:33028063..33028067, - |
| 1.64e-40 | FFCP PHASE1:Hg19::chr20:21686317..21686350,+#_ea405f8627e83b167059280bc73e871f | p1@PAX1 |
| 1.64e-40 | FFCP PHASE2:Hg19::chr20:21686317..21686350,+#_ea405f8627e83b167059280bc73e871f | p1@PAX1 |
| 1.81e-40 | FFCP PHASE1:Hg19::chr1:78769549..78769554,+#_660a002be7504d3e49fb94964f409d2f | p5@PTGFR |
| 1.81e-40 | FFCP PHASE2:Hg19::chr1:78769549..78769554,+#_660a002be7504d3e49fb94964f409d2f | p5@PTGFR |
| 2.13e-40 | FFCP PHASE1:Hg19::chr2:241897363..241897398,+#_61ba4a35c2b7ed75625666a79fc41184 | p@chr2:241897363..241897398, + |
| 2.13e-40 | FFCP PHASE2:Hg19::chr2:241897363..241897398,+#_61ba4a35c2b7ed75625666a79fc41184 | p@chr2:241897363..241897398, + |
| 3.04e-39 | FFCP PHASE1:Hg19::chr20:21686290..21686311,+#_9306e8ec234fd28b7e8c3031d74844f1 | p2@PAX1 |
| 3.04e-39 | FFCP PHASE2:Hg19::chr20:21686290..21686311,+#_9306e8ec234fd28b7e8c3031d74844f1 | p2@PAX1 |
| 7.19e-39 | FFCP PHASE1:Hg19::chr7:18832759..18832786,+#_27cd2ef408ed8e50ad38bc84889090ad | p16@HDAC9 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr7:18832759..18832786,+#_27cd2ef408ed8e50ad38bc84889090ad | p16@HDAC9 |
| 7.19e-39 | FFCP PHASE2:Hg19::chr5:140887761..140887777,+#_27cd2ef408ed8e50ad38bc84889090ad | p@chr5:140887761..140887777, + |
| 7.19e-39 | FFCP PHASE1:Hg19::chr5:140887761..140887777,+#_27cd2ef408ed8e50ad38bc84889090ad | p@chr5:140887761..140887777, + |
| 1.24e-38 | FFCP PHASE2:Hg19::chr4:77068930..77068959,-#_3bab807919200d9572bd62153510b765 | p4@NUP54 |
| 1.24e-38 | FFCP PHASE1:Hg19::chr4:77068930..77068959,-#_3bab807919200d9572bd62153510b765 | p4@NUP54 |
| 2.08e-38 | FFCP PHASE1:Hg19::chr2:241938405..241938416,+#_f01fe1349d87e6678567d3b2bef0d766 | p@chr2:241938405..241938416, + |
| 2.08e-38 | FFCP PHASE2:Hg19::chr2:241938405..241938416,+#_f01fe1349d87e6678567d3b2bef0d766 | p@chr2:241938405..241938416, + |
| 3.34e-38 | FFCP PHASE2:Hg19::chr4:13546632..13546662,-#_d20c7780f20a4dc21483cbd65610c570 | p1@NKX3-2 |
| 3.34e-38 | FFCP PHASE1:Hg19::chr4:13546632..13546662,-#_d20c7780f20a4dc21483cbd65610c570 | p1@NKX3-2 |
| 3.68e-38 | FFCP PHASE1:Hg19::chr6:158490457..158490470,+#_a2996f0ba69473224c49086f73d2c522 | p10@SYNJ2 |
| 3.68e-38 | FFCP PHASE2:Hg19::chr6:158490457..158490470,+#_a2996f0ba69473224c49086f73d2c522 | p10@SYNJ2 |
| 5.39e-38 | FFCP PHASE2:Hg19::chr9:16138889..16138902,-#_61500e69a07d2b188c89ce076916eaa4 | p@chr9:16138889..16138902, - |
| 5.39e-38 | FFCP PHASE1:Hg19::chr9:16138889..16138902,-#_61500e69a07d2b188c89ce076916eaa4 | p@chr9:16138889..16138902, - |
| 8.66e-38 | FFCP PHASE2:Hg19::chr8:78311303..78311320,+#_5c2eff9df968df5941a26606702919be | p2@ENST00000518706 |
| 8.66e-38 | FFCP PHASE1:Hg19::chr8:78311303..78311320,+#_5c2eff9df968df5941a26606702919be | p2@ENST00000518706 |
| 2.96e-37 | FFCP PHASE2:Hg19::chr21:39705383..39705394,-#_88f30fb8fcb96ffc72fdc8012c7c66e3 | p1@ENST00000436845 |
| 2.96e-37 | FFCP PHASE1:Hg19::chr21:39705383..39705394,-#_88f30fb8fcb96ffc72fdc8012c7c66e3 | p1@ENST00000436845 |
| 6.92e-37 | FFCP PHASE2:Hg19::chr9:123239747..123239765,-#_db9dc8a0dd190e57c44aef86dd0c45d4 | p12@CDK5RAP2 |
| 6.92e-37 | FFCP PHASE1:Hg19::chr9:123239747..123239765,-#_db9dc8a0dd190e57c44aef86dd0c45d4 | p12@CDK5RAP2 |
| 3.28e-36 | FFCP PHASE1:Hg19::chr1:78695298..78695311,+#_10ad05bf19f22fd212a77ce803336161 | p1@ENST00000413519 |
| 3.28e-36 | FFCP PHASE2:Hg19::chr1:78695298..78695311,+#_10ad05bf19f22fd212a77ce803336161 | p1@ENST00000413519 |
| 9.62e-35 | FFCP PHASE1:Hg19::chr14:37126814..37126834,+#_7db10cf5cf1123f5fb32f269a38ee608 | p4@PAX9 |
| 9.62e-35 | FFCP PHASE2:Hg19::chr14:37126814..37126834,+#_7db10cf5cf1123f5fb32f269a38ee608 | p4@PAX9 |
| 1.8e-34 | FFCP PHASE1:Hg19::chr7:100202784..100202796,-#_06d9020100e8e8f7ab78f90faf9fe5fd | p@chr7:100202784..100202796, - |
| 1.8e-34 | FFCP PHASE2:Hg19::chr7:100202784..100202796,-#_06d9020100e8e8f7ab78f90faf9fe5fd | p@chr7:100202784..100202796, - |
| 3.69e-34 | FFCP PHASE1:Hg19::chr12:54422268..54422278,+#_588184230de5be172ec8983f495464db | p8@HOXC6 |
| 3.69e-34 | FFCP PHASE2:Hg19::chr12:54422268..54422278,+#_588184230de5be172ec8983f495464db | p8@HOXC6 |
| 5.52e-34 | FFCP PHASE1:Hg19::chr11:60610073..60610090,+#_2ad06793ae93ace4e2502889c14979e1 | p6@CCDC86 |
| 5.52e-34 | FFCP PHASE2:Hg19::chr11:60610073..60610090,+#_2ad06793ae93ace4e2502889c14979e1 | p6@CCDC86 |
| 1.43e-33 | FFCP PHASE1:Hg19::chr20:21695435..21695452,+#_d8e971de9f0c973cd3b6f7d0ffade147 | p@chr20:21695435..21695452, + |
| 1.43e-33 | FFCP PHASE2:Hg19::chr20:21695435..21695452,+#_d8e971de9f0c973cd3b6f7d0ffade147 | p@chr20:21695435..21695452, + |
| 5.36e-33 | FFCP PHASE1:Hg19::chr16:70795228..70795237,+#_d349d2b7c25b2a6fa142f72112514d0b | p@chr16:70795228..70795237, + |
| 5.36e-33 | FFCP PHASE2:Hg19::chr16:70795228..70795237,+#_d349d2b7c25b2a6fa142f72112514d0b | p@chr16:70795228..70795237, + |
| 1.05e-32 | FFCP PHASE2:Hg19::chr3:158384350..158384362,-#_b180528597e572a3909db418f11d73ef | p@chr3:158384350..158384362, - |
| 1.05e-32 | FFCP PHASE1:Hg19::chr3:158384350..158384362,-#_b180528597e572a3909db418f11d73ef | p@chr3:158384350..158384362, - |
| 1.7e-32 | FFCP PHASE2:Hg19::chr2:158345440..158345449,-#_06afa4c3cbc33ff4e2343adc966d7ce5 | p9@CYTIP |
| 1.7e-32 | FFCP PHASE1:Hg19::chr2:158345440..158345449,-#_06afa4c3cbc33ff4e2343adc966d7ce5 | p9@CYTIP |
| 2.34e-32 | FFCP PHASE2:Hg19::chr18:12012068..12012098,+#_e9fc1e815521d1157b6f1c8ccb14c782 | p@chr18:12012068..12012098, + |
| 2.34e-32 | FFCP PHASE1:Hg19::chr18:12012068..12012098,+#_e9fc1e815521d1157b6f1c8ccb14c782 | p@chr18:12012068..12012098, + |
| 2.79e-31 | FFCP PHASE1:Hg19::chr14:37126870..37126882,+#_69cd8acb1170861bb59c926fd2b2352d | p1@ENST00000555639 |
| 2.79e-31 | FFCP PHASE2:Hg19::chr14:37126870..37126882,+#_69cd8acb1170861bb59c926fd2b2352d | p1@ENST00000555639 |
