FFCP PHASE1:Hg19::chr6:32822278..32822290,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6890 | |EntrezGene=6890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=43 | |HGNC=43 | ||
|TSSclassifier=strong | |||
|UniProt=B2R9F3 | |UniProt=B2R9F3 | ||
|association_with_transcript=-494bp_to_AK313762_5end | |association_with_transcript=-494bp_to_AK313762_5end | ||
|cluster_id=chr6:32822278..32822290,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_14_at_TAP1_5end | |description=CAGE_peak_14_at_TAP1_5end | ||
|id=chr6:32822278..32822290,- | |id=chr6:32822278..32822290,- | ||
|ontology_enrichment_celltype=CL:0000860;2.76e-43;33!CL:0002057;2.76e-43;33!CL:0000473;1.69e-31;39!CL:0000234;1.69e-31;39!CL:0000576;1.14e-24;48!CL:0000766;1.53e-10;69!CL:0000763;3.05e-07;100 | |ontology_enrichment_celltype=CL:0002057!3.58e-36!42;CL:0000860!1.75e-33!45;CL:0000766!1.60e-22!76;CL:0002194!2.61e-22!63;CL:0000576!2.61e-22!63;CL:0000040!2.61e-22!63;CL:0000559!2.61e-22!63;CL:0002009!1.65e-21!65;CL:0000839!1.05e-19!70;CL:0000557!2.26e-19!71;CL:0002087!1.69e-17!119;CL:0000738!2.91e-17!140;CL:0002031!5.27e-15!124;CL:0000763!6.84e-14!112;CL:0000049!6.84e-14!112;CL:0000037!4.87e-13!172;CL:0000566!4.87e-13!172;CL:0002032!1.53e-12!165;CL:0000837!1.53e-12!165;CL:0000988!5.03e-12!182;CL:0000775!6.35e-08!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.76e-43;33!CL:0002057;2.76e-43;33!CL:0000473;1.69e-31;39!CL:0000234;1.69e-31;39!CL:0000576;1.14e-24;48!CL:0000766;1.53e-10;69!CL:0000763;3.05e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.50e-38,42;CL:0002057,9.50e-38,42;CL:0000473,5.23e-33,48;CL:0000234,5.23e-33,48;CL:0002194,2.32e-26,59;CL:0000576,2.32e-26,59;CL:0000040,2.32e-26,59;CL:0000559,2.32e-26,59;CL:0002009,1.67e-25,61;CL:0000839,1.40e-23,66;CL:0000557,3.14e-23,67;CL:0000766,1.28e-21,72;CL:0000763,2.31e-14,108;CL:0000049,2.31e-14,108;CL:0002087,1.80e-13,115;CL:0002031,6.76e-13,120;CL:0000738,2.45e-11,136;CL:0002032,1.64e-09,161;CL:0000837,1.64e-09,161;CL:0000037,4.27e-09,168;CL:0000988,1.31e-08,177 | |||
|ontology_enrichment_development_v019=CL:0002057;6.96e-29;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!6.63e-19!112;UBERON:0002390!2.42e-17!102;UBERON:0003061!2.42e-17!102;UBERON:0002371!9.17e-17!80;UBERON:0001474!2.51e-15!86;UBERON:0002405!7.56e-15!115;UBERON:0004765!1.77e-12!101;UBERON:0001434!1.77e-12!101;UBERON:0003081!2.89e-08!216;UBERON:0002204!6.25e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.77e-20,76;UBERON:0001474,5.63e-19,82;UBERON:0004765,2.81e-17,90;UBERON:0002405,1.03e-16,93;UBERON:0002390,7.49e-16,98;UBERON:0003061,7.49e-16,98;UBERON:0001434,1.57e-15,100;UBERON:0002193,2.31e-14,108;UBERON:0002204,3.74e-09,167;UBERON:0003081,1.94e-07,203 | |||
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|short_description=p14@TAP1 | |short_description=p14@TAP1 | ||
}} | }} |
Latest revision as of 04:20, 18 September 2015
Short description: | p14@TAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TAP1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | -494bp_to_AK313762_5end |
EntrezGene: | TAP1 |
HGNC: | 43 |
UniProt: | B2R9F3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.50e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.50e-38 | 42 |
defensive cell | 5.23e-33 | 48 |
phagocyte | 5.23e-33 | 48 |
monopoietic cell | 2.32e-26 | 59 |
monocyte | 2.32e-26 | 59 |
monoblast | 2.32e-26 | 59 |
promonocyte | 2.32e-26 | 59 |
macrophage dendritic cell progenitor | 1.67e-25 | 61 |
myeloid lineage restricted progenitor cell | 1.40e-23 | 66 |
granulocyte monocyte progenitor cell | 3.14e-23 | 67 |
myeloid leukocyte | 1.28e-21 | 72 |
myeloid cell | 2.31e-14 | 108 |
common myeloid progenitor | 2.31e-14 | 108 |
nongranular leukocyte | 1.80e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 6.76e-13 | 120 |
leukocyte | 2.45e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-09 | 161 |
hematopoietic stem cell | 4.27e-09 | 168 |
hematopoietic cell | 1.31e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.77e-20 | 76 |
bone element | 5.63e-19 | 82 |
skeletal element | 2.81e-17 | 90 |
immune system | 1.03e-16 | 93 |
hematopoietic system | 7.49e-16 | 98 |
blood island | 7.49e-16 | 98 |
skeletal system | 1.57e-15 | 100 |
hemolymphoid system | 2.31e-14 | 108 |
musculoskeletal system | 3.74e-09 | 167 |
lateral plate mesoderm | 1.94e-07 | 203 |