FFCP PHASE1:Hg19::chr1:111772435..111772463,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:111772435..111772463,+
|short_description=p4@CHI3L2
|description=CAGE_peak_4_at_CHI3L2_5end
|association_with_transcript=0bp_to_ENST00000524472_5end
|Entr...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1117 | |EntrezGene=1117 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1933 | |HGNC=1933 | ||
|TSSclassifier=strong | |||
|UniProt=B4DPR7 | |UniProt=B4DPR7 | ||
|association_with_transcript=0bp_to_ENST00000524472_5end | |||
|cluster_id=chr1:111772435..111772463,+ | |||
|coexpression_cluster_id=C359 | |||
|description=CAGE_peak_4_at_CHI3L2_5end | |||
|id=chr1:111772435..111772463,+ | |||
|ontology_enrichment_celltype=CL:0000838!5.30e-40!52;CL:0000542!5.06e-39!53;CL:0000051!5.06e-39!53;CL:0000084!2.17e-21!25;CL:0000827!2.17e-21!25;CL:0000791!3.80e-21!18;CL:0000789!3.80e-21!18;CL:0002420!3.80e-21!18;CL:0002419!3.80e-21!18;CL:0000790!3.80e-21!18;CL:0000625!4.09e-20!11;CL:0000945!2.07e-17!24;CL:0000826!2.07e-17!24;CL:0002087!1.12e-15!119;CL:0000738!3.72e-15!140;CL:0002031!1.29e-13!124;CL:0000037!1.87e-11!172;CL:0000566!1.87e-11!172;CL:0000988!3.66e-10!182;CL:0002032!1.62e-09!165;CL:0000837!1.62e-09!165;CL:0000817!9.18e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.65e-25;53!CL:0000945;4.01e-24;24!CL:0000084;4.25e-22;25!CL:0000625;6.48e-18;11!CL:0000791;2.27e-17;18!CL:0000789;2.27e-17;18!CL:0002419;2.27e-17;18!CL:0000236;5.10e-08;13!CL:0002087;2.00e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.66e-50,52;CL:0000542,3.11e-49,53;CL:0000051,3.11e-49,53;CL:0000945,5.13e-24,24;CL:0000826,5.13e-24,24;CL:0000084,3.20e-22,25;CL:0000827,3.20e-22,25;CL:0002087,4.20e-19,115;CL:0000738,2.61e-18,136;CL:0000625,4.09e-18,11;CL:0002031,4.65e-18,120;CL:0000791,1.69e-17,18;CL:0000789,1.69e-17,18;CL:0002420,1.69e-17,18;CL:0002419,1.69e-17,18;CL:0000790,1.69e-17,18;CL:0000037,1.31e-13,168;CL:0002032,3.66e-13,161;CL:0000837,3.66e-13,161;CL:0000988,1.36e-12,177;CL:0000236,1.54e-10,14;CL:0000785,5.19e-10,2;CL:0000955,5.19e-10,2;CL:0000818,5.19e-10,2;CL:0000954,5.19e-10,2;CL:0000816,5.19e-10,2;CL:0000893,2.60e-09,2;CL:0002489,2.60e-09,2;CL:0000809,2.60e-09,2;CL:0000808,2.60e-09,2;CL:0000894,2.60e-09,2;CL:0000806,2.60e-09,2;CL:0000807,2.60e-09,2;CL:0000805,2.60e-09,2;CL:0002425,2.60e-09,2;CL:0000817,6.18e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;1.65e-25;53!CL:0000790;2.27e-17;18!UBERON:0004872;1.69e-10;7!CL:0000954;4.63e-10;2!CL:0002425;2.29e-09;2 | |||
|ontology_enrichment_disease=DOID:0060058!8.29e-09!10 | |||
|ontology_enrichment_disease_v019=DOID:0060058;4.86e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,4.98e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0004177!1.37e-14!7;UBERON:0003408!4.06e-09!10;UBERON:0001042!4.61e-09!10;UBERON:0009145!4.61e-09!10;UBERON:0002370!5.34e-09!4;UBERON:0005058!5.34e-09!4;UBERON:0009113!5.34e-09!4;UBERON:0003295!5.34e-09!4;UBERON:0005562!5.34e-09!4;UBERON:0000178!3.11e-08!15;UBERON:0000179!3.11e-08!15;UBERON:0000463!3.11e-08!15;UBERON:0006562!4.06e-08!11;UBERON:0002106!2.93e-07!3;UBERON:0004854!2.93e-07!3;UBERON:0009034!2.93e-07!3;UBERON:0002095!2.93e-07!3;UBERON:0004782!2.93e-07!3;UBERON:0003281!2.93e-07!3;UBERON:0009664!2.93e-07!3;UBERON:0002296!2.93e-07!3;UBERON:0005602!2.93e-07!3;UBERON:0001179!2.93e-07!3;UBERON:0006293!2.93e-07!3;UBERON:0000974!8.27e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004177;9.07e-23;5!UBERON:0005057;9.07e-23;5!UBERON:0002106;4.39e-14;3!UBERON:0002370;1.92e-10;2!UBERON:0005058;1.92e-10;2!UBERON:0009113;1.92e-10;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.08e-30,7;UBERON:0005057,2.08e-30,7;UBERON:0002370,5.24e-18,4;UBERON:0005058,5.24e-18,4;UBERON:0009113,5.24e-18,4;UBERON:0003295,5.24e-18,4;UBERON:0005562,5.24e-18,4;UBERON:0002106,3.61e-14,3;UBERON:0004854,3.61e-14,3;UBERON:0009034,3.61e-14,3;UBERON:0002095,3.61e-14,3;UBERON:0004782,3.61e-14,3;UBERON:0003281,3.61e-14,3;UBERON:0009664,3.61e-14,3;UBERON:0002296,3.61e-14,3;UBERON:0005602,3.61e-14,3;UBERON:0001179,3.61e-14,3;UBERON:0006293,3.61e-14,3;UBERON:0003351,4.86e-12,6;UBERON:0001042,7.12e-11,10;UBERON:0009145,7.12e-11,10;UBERON:0000974,9.14e-11,10;UBERON:0003408,1.17e-10,10;UBERON:0006562,7.39e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.398848906998,7.55325422939501,8.81560750713207,3.14691421479123,0,0.154816123316076,0,0,0,0.0774672005803016,50.3279083005472,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41384178053206,3.60356388332411,0,0,0,1.1384259382189,0,1.14681968437569,0,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,1.18629250529648,0.802622484269139,2.09071047609954,0.113309342697566,1.14966148080576,2.06176467289578,0.759059076058509,1.91139248594458,3.25541726928209,0.950452044448374,1.35517607169996,1.27986611154418,3.74792179657038,2.36777252044017,0.821127996921047,0.604820229674197,0.802320587350522,1.73789284659359,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0463228654644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0,1.07813787429759,3.85029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0.28853842595289,3.91280138416278,20.8848417274757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31540698637377,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0.067401132980677,0,0,2.00700268137233,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0,1.97611631897944,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0,0,74.0954539983661,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,1.31135736302374,0,0,0,0,0,0,0,3.853340637174,2.19156819110162,27.1839944115807,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.66645102024618,41.2723133852079,32.340926148142,0,0,0.404234377916439,0.217716747896961,0.342233301085281,3.09819443867103,0.0717222053926763,0,0,0,0,0,0,0,0,0,8.05095174364105,233.373862396754 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.398848906998,7.55325422939501,8.81560750713207,3.14691421479123,0,0.154816123316076,0,0,0,0.0774672005803016,50.3279083005472,0,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41384178053206,3.60356388332411,0,0,0,1.1384259382189,0,1.14681968437569,0,0,0.263384084775077,0.393419540227666,0,0.205601498999509,0.167186495390678,0,0.473447805734733,0,0.222820913770347,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0.579606171470105,1.18629250529648,0.802622484269139,2.09071047609954,0.113309342697566,1.14966148080576,2.06176467289578,0.759059076058509,1.91139248594458,3.25541726928209,0.950452044448374,1.35517607169996,1.27986611154418,3.74792179657038,2.36777252044017,0.821127996921047,0.604820229674197,0.802320587350522,1.73789284659359,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.0463228654644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35378802386407,0,1.07813787429759,3.85029108839245,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0.82707210449155,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0.569647187174163,0.476463550915578,0.411362273086194,0.648473311192717,0.540031437238115,0,0,0,0,0,0.28853842595289,3.91280138416278,20.8848417274757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31540698637377,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,1.83309043480088,0,0,0,0.067401132980677,0,0,2.00700268137233,0,0,0,1.20990716048664,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0.106787412567695,0.314408610199332,1.24271716604159,0,1.97611631897944,1.33971858218986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,1.09651553371436,0,0,0,0,0,0,0,0,74.0954539983661,0,0.0679697329768317,0,0,0,0,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,1.31135736302374,0,0,0,0,0,0,0,3.853340637174,2.19156819110162,27.1839944115807,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,1.66645102024618,41.2723133852079,32.340926148142,0,0,0.404234377916439,0.217716747896961,0.342233301085281,3.09819443867103,0.0717222053926763,0,0,0,0,0,0,0,0,0,8.05095174364105,233.373862396754 | ||
|short_description=p4@CHI3L2 | |||
}} | }} |
Latest revision as of 03:01, 16 September 2015
Short description: | p4@CHI3L2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHI3L2_5end |
Coexpression cluster: | C359_xeroderma_tonsil_acute_colon_lymph_trachea_bladder |
Association with transcript: | 0bp_to_ENST00000524472_5end |
EntrezGene: | CHI3L2 |
HGNC: | 1933 |
UniProt: | B4DPR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.08e-30 | 7 |
immune organ | 2.08e-30 | 7 |
thymus | 5.24e-18 | 4 |
hemolymphoid system gland | 5.24e-18 | 4 |
thymic region | 5.24e-18 | 4 |
pharyngeal gland | 5.24e-18 | 4 |
thymus primordium | 5.24e-18 | 4 |
spleen | 3.61e-14 | 3 |
gastrointestinal system mesentery | 3.61e-14 | 3 |
stomach region | 3.61e-14 | 3 |
mesentery | 3.61e-14 | 3 |
gastrointestinal system serosa | 3.61e-14 | 3 |
mesentery of stomach | 3.61e-14 | 3 |
gut mesentery | 3.61e-14 | 3 |
dorsal mesentery | 3.61e-14 | 3 |
dorsal mesogastrium | 3.61e-14 | 3 |
peritoneal cavity | 3.61e-14 | 3 |
spleen primordium | 3.61e-14 | 3 |
pharyngeal epithelium | 4.86e-12 | 6 |
chordate pharynx | 7.12e-11 | 10 |
pharyngeal region of foregut | 7.12e-11 | 10 |
neck | 9.14e-11 | 10 |
gland of gut | 1.17e-10 | 10 |
pharynx | 7.39e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 4.98e-11 | 10 |