FFCP PHASE1:Hg19::chr16:87887280..87887293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:87887280..87887293,- | |||
|coexpression_cluster_id=C19 | |coexpression_cluster_id=C19 | ||
|description=CAGE_peak_at_chr16:87887280..87887293,- | |description=CAGE_peak_at_chr16:87887280..87887293,- | ||
|id=chr16:87887280..87887293,- | |id=chr16:87887280..87887293,- | ||
|ontology_enrichment_celltype=CL:0000860;2.29e-39;33!CL:0002057;2.29e-39;33!CL:0000473;1.08e-25;39!CL:0000234;1.08e-25;39!CL:0000576;1.19e-17;48!CL:0000766;1.33e-12;69!CL:0002567;6.41e-10;3!CL:0000081;8.28e-10;11!CL:0000763;2.68e-09;100!CL:0000094;5.21e-08;8!CL:0002550;7.09e-08;1!CL:0002566;7.09e-08;1!CL:0002087;2.87e-07;104 | |ontology_enrichment_celltype=CL:0000860!1.44e-12!45;CL:0002057!1.78e-11!42;CL:0000766!1.51e-09!76;CL:0000548!3.60e-07!679;CL:0000004!3.60e-07!679;CL:0000255!3.60e-07!679;CL:0000839!3.81e-07!70;CL:0002194!6.09e-07!63;CL:0000576!6.09e-07!63;CL:0000040!6.09e-07!63;CL:0000559!6.09e-07!63;CL:0000012!6.36e-07!682;CL:0000219!6.62e-07!390 | ||
| | |ontology_enrichment_celltype_v019=CL:0000860;2.29e-39;33!CL:0002057;2.29e-39;33!CL:0000473;1.08e-25;39!CL:0000234;1.08e-25;39!CL:0000576;1.19e-17;48!CL:0000766;1.33e-12;69!CL:0002567;6.41e-10;3!CL:0000081;8.28e-10;11!CL:0000763;2.68e-09;100!CL:0000094;5.21e-08;8!CL:0002550;7.09e-08;1!CL:0002566;7.09e-08;1!CL:0002087;2.87e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.50e-33,42;CL:0002057,1.50e-33,42;CL:0000473,5.51e-29,48;CL:0000234,5.51e-29,48;CL:0000766,1.85e-26,72;CL:0002194,1.36e-22,59;CL:0000576,1.36e-22,59;CL:0000040,1.36e-22,59;CL:0000559,1.36e-22,59;CL:0002009,9.08e-22,61;CL:0000839,6.39e-20,66;CL:0000557,1.39e-19,67;CL:0000763,1.56e-16,108;CL:0000049,1.56e-16,108;CL:0000738,2.04e-12,136;CL:0000988,3.43e-11,177;CL:0002087,2.99e-10,115;CL:0002567,4.79e-10,3;CL:0002032,6.00e-10,161;CL:0000837,6.00e-10,161;CL:0000081,9.43e-10,11;CL:0002031,1.05e-09,120;CL:0000037,2.18e-09,168;CL:0000094,6.11e-08,8;CL:0002566,7.10e-08,1;CL:0002550,9.94e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;7.58e-23;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.03e-17,76;UBERON:0002390,2.26e-16,98;UBERON:0003061,2.26e-16,98;UBERON:0001474,1.66e-15,82;UBERON:0002193,1.47e-14,108;UBERON:0004765,7.01e-14,90;UBERON:0002405,2.42e-13,93;UBERON:0001434,3.27e-12,100;UBERON:0003081,3.76e-07,203 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0,0,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,2.58923153089935,0.768482119587302,1.89185783910868,1.72372840368309,1.93645405075148,0,0.941211697713023,0,0.674170453335254,3.67300670845083,4.49300637906531,5.11469700639233,0.329851300186716,0.199463657621632,0,3.77272010217159,7.37600792098482,3.11411124497787,0,1.0429658368404,1.52032191293582,4.23779651843358,5.89244217580104,7.59509729858123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0.485618833104395,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0.292311015483596,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,1.46045156871989,1.90994212779139,0,3.4214489204541,0.411309970813294,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0.448340575974109,0,0,0.128343036279748,0,0,0,0,0,2.24702107184155,0,0.828831026872071,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0.184161977871793,0.229628896329213,0.364182336013434,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.676695028044854,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.563391205064483,0,0,0.35667105148125,0,0.211107635297664,0,0,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0.846694330895531,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.369254416383208,0.311039587661807,0.179736702294654,1.79021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.762569244632931,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,1.19512109114209,0,0,0,0,0,0,0,0,0.503464760927528,0,0,0,0,0,0,0,0,0,1.48260564340311,1.11207545051853,0.417687798021821,0,0,0,0,0.19566461893209,0,0,0,0,0,36.6789143371362,0,0,0,0.627865836814451,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0.864328787928898,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0.720599767084807,0,0.157566364614447,0.247247575143499,0,0.0984274815147488,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0.159296767163702,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,1.01024846629776,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0,0.426766918776564,0.861074898304078,0,0,0.139879507719444,0,0.383683113910955,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.315446980005013,0,0.352675943690684,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0.785181748008205,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.460935950223117,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0.67767649223376,0,0,0,0,0.47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|phase1_expression=0,0.214100523890983,0.281908808191942,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0.152826811495903,0,0,1.18009283054671,0.383829398097213,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0,0,0,0,0,0.232429036905685,0,0.619412741790207,2.58923153089935,0.768482119587302,1.89185783910868,1.72372840368309,1.93645405075148,0,0.941211697713023,0,0.674170453335254,3.67300670845083,4.49300637906531,5.11469700639233,0.329851300186716,0.199463657621632,0,3.77272010217159,7.37600792098482,3.11411124497787,0,1.0429658368404,1.52032191293582,4.23779651843358,5.89244217580104,7.59509729858123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0.571994910780128,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0.269421344139376,0,0,0,1.17160715916898,0,0,0,0.117434498643765,0.485618833104395,0,0.204154171254893,0,0,0,0,0,0.718618141816238,0,0.125118519871964,0,0.438977620880838,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0.292311015483596,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0.12624243342638,1.46045156871989,1.90994212779139,0,3.4214489204541,0.411309970813294,0.300343057843917,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0,0,0,0,0,0,0.479249710983165,0,0,0.144781306667579,0,0,0.448340575974109,0,0,0.128343036279748,0,0,0,0,0,2.24702107184155,0,0.828831026872071,0,0.500170521059677,0,0.207970861530807,0.178428988797162,0,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,0.206768026122887,0,0.213455115606889,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0,0,0.160853921143607,0,0,0,0,0,0,0.241718899183244,0,0.184161977871793,0.229628896329213,0.364182336013434,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.522870902049801,0,0,0,0,0.0915694648183434,0.082509499920588,0,0,0,0.676695028044854,0.154048617114644,0,0.137836572484531,0,0,0.170453254832202,0.178064071293475,0.165284915360978,0,0,0,0.464845549297286,0.31481234683064,0,0.616067160352178,0,0,0,0.143124886741991,0,0,0,0,0.42793898803392,0.318203247925937,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.405820753925408,0,0.563391205064483,0,0,0.35667105148125,0,0.211107635297664,0,0,1.74967360122491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0.846694330895531,0,0,0,0,0,0,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0.102268682502155,0.369254416383208,0.311039587661807,0.179736702294654,1.79021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.762569244632931,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,1.19512109114209,0,0,0,0,0,0,0,0,0.503464760927528,0,0,0,0,0,0,0,0,0,1.48260564340311,1.11207545051853,0.417687798021821,0,0,0,0,0.19566461893209,0,0,0,0,0,36.6789143371362,0,0,0,0.627865836814451,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0.0882561266915003,0,0.274083849293502,0,0,0,0.0801588202515337,0,0,0,0.114536596165916,0,0.864328787928898,0,0,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0.720599767084807,0,0.157566364614447,0.247247575143499,0,0.0984274815147488,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454947352624943,0,0,0,0,0.149254802886874,0.233713309847224,0,0,0,0,0.457680136793847,0,0.15543720058278,0,0.159296767163702,0.449803112163605,0,0,0,0.521745061811734,0,0,0,0.181848659202559,0.107410557042488,0,0,0.400027764663154,0,1.01024846629776,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0,0.426766918776564,0.861074898304078,0,0,0.139879507719444,0,0.383683113910955,0,0,0.109209638192014,0,0,0.123935764259002,0,0,0.315446980005013,0,0.352675943690684,0,0,0,0.319267718114302,0,0.252071696221718,0,0,0,0.785181748008205,0.11796972334774,0,0.115525666150338,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0.460935950223117,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0.170426809518315,0.423387050190929,0,0,0,0,0.883352102537187,0,0,0,0,0,0,0,0,0.67767649223376,0,0,0,0,0.47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| ||
|short_description=p@chr16:87887280..87887293,- | |short_description=p@chr16:87887280..87887293,- | ||
}} | }} |
Latest revision as of 13:14, 25 July 2015
Short description: | p@chr16:87887280..87887293, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:87887280..87887293, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.50e-33 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.50e-33 | 42 |
defensive cell | 5.51e-29 | 48 |
phagocyte | 5.51e-29 | 48 |
myeloid leukocyte | 1.85e-26 | 72 |
monopoietic cell | 1.36e-22 | 59 |
monocyte | 1.36e-22 | 59 |
monoblast | 1.36e-22 | 59 |
promonocyte | 1.36e-22 | 59 |
macrophage dendritic cell progenitor | 9.08e-22 | 61 |
myeloid lineage restricted progenitor cell | 6.39e-20 | 66 |
granulocyte monocyte progenitor cell | 1.39e-19 | 67 |
myeloid cell | 1.56e-16 | 108 |
common myeloid progenitor | 1.56e-16 | 108 |
leukocyte | 2.04e-12 | 136 |
hematopoietic cell | 3.43e-11 | 177 |
nongranular leukocyte | 2.99e-10 | 115 |
light melanocyte | 4.79e-10 | 3 |
hematopoietic oligopotent progenitor cell | 6.00e-10 | 161 |
hematopoietic multipotent progenitor cell | 6.00e-10 | 161 |
blood cell | 9.43e-10 | 11 |
hematopoietic lineage restricted progenitor cell | 1.05e-09 | 120 |
hematopoietic stem cell | 2.18e-09 | 168 |
granulocyte | 6.11e-08 | 8 |
dark melanocyte | 7.10e-08 | 1 |
fibroblast of the conjuctiva | 9.94e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.03e-17 | 76 |
hematopoietic system | 2.26e-16 | 98 |
blood island | 2.26e-16 | 98 |
bone element | 1.66e-15 | 82 |
hemolymphoid system | 1.47e-14 | 108 |
skeletal element | 7.01e-14 | 90 |
immune system | 2.42e-13 | 93 |
skeletal system | 3.27e-12 | 100 |
lateral plate mesoderm | 3.76e-07 | 203 |