FFCP PHASE1:Hg19::chr2:103089756..103089768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389015 | |EntrezGene=389015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11077 | |HGNC=11077 | ||
|TSSclassifier=strong | |||
|UniProt=Q6AI14 | |UniProt=Q6AI14 | ||
|association_with_transcript=0bp_to_ENST00000295269,NM_001011552,uc002tbz.3_5end | |association_with_transcript=0bp_to_ENST00000295269,NM_001011552,uc002tbz.3_5end | ||
|cluster_id=chr2:103089756..103089768,+ | |||
|coexpression_cluster_id=C42 | |coexpression_cluster_id=C42 | ||
|description=CAGE_peak_2_at_SLC9A4_5end | |description=CAGE_peak_2_at_SLC9A4_5end | ||
|id=chr2:103089756..103089768,+ | |id=chr2:103089756..103089768,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000313!1.95e-07!1;CL:1001319!3.20e-07!1;CL:1000600!3.20e-07!1;CL:0002563!4.92e-07!4 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |ontology_enrichment_celltype_v019_2= | ||
|ontology_enrichment_uberon=UBERON:0002110;8.70e-18;3!UBERON:0000945;3.10e-11;5!UBERON:0010039;3.10e-11;5!UBERON:0002294;2.11e-08;7!UBERON:0001173;2.11e-08;7 | |ontology_enrichment_development_v019=UBERON:0006242;3.10e-50;1!UBERON:0003104;3.75e-07;31 | ||
|ontology_enrichment_disease=DOID:2152!1.95e-07!1;DOID:0050619!2.50e-07!1;DOID:1357!2.50e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;8.82e-14;4!DOID:1325;1.89e-08;7!DOID:3904;1.89e-08;7!DOID:3905;7.48e-07;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,8.82e-14,4;DOID:1325,1.89e-08,7;DOID:3904,1.89e-08,7;DOID:3905,7.48e-07,9 | |||
|ontology_enrichment_uberon=UBERON:0000341!3.18e-13!2;UBERON:0001255!6.64e-13!2;UBERON:0001556!6.64e-13!2;UBERON:0003350!1.86e-11!5;UBERON:0000974!1.11e-09!10;UBERON:0002110!1.36e-09!3;UBERON:0006242!1.36e-09!3;UBERON:0000464!9.90e-09!104;UBERON:0000489!1.55e-08!32;UBERON:0006554!1.05e-07!44;UBERON:0007029!1.10e-07!1;UBERON:0000998!1.33e-07!1;UBERON:0006868!1.33e-07!1;UBERON:0000077!1.50e-07!130;UBERON:0001008!1.66e-07!45;UBERON:0004911!1.95e-07!1;UBERON:0001764!2.50e-07!1;UBERON:0001825!2.50e-07!1;UBERON:0004645!3.20e-07!1;UBERON:0001256!3.20e-07!1;UBERON:0001259!3.20e-07!1;UBERON:0005177!3.51e-07!107;UBERON:0002336!4.09e-07!1;UBERON:0001018!4.09e-07!1;UBERON:0002473!4.09e-07!1;UBERON:0005340!4.09e-07!1;UBERON:0002316!4.09e-07!1;UBERON:0003544!4.09e-07!1;UBERON:0001020!4.09e-07!1;UBERON:0005970!4.09e-07!1;UBERON:0002437!4.09e-07!1;UBERON:0001242!4.92e-07!4;UBERON:0001262!4.92e-07!4;UBERON:0004786!4.92e-07!4;UBERON:0004808!4.92e-07!4;UBERON:0001277!4.92e-07!4;UBERON:0002553!5.09e-07!70;UBERON:0001007!9.27e-07!155;UBERON:0001555!9.27e-07!155;UBERON:0007026!9.27e-07!155;UBERON:0000466!9.77e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002110;8.70e-18;3!UBERON:0000945;3.10e-11;5!UBERON:0010039;3.10e-11;5!UBERON:0002294;2.11e-08;7!UBERON:0001173;2.11e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002110,9.46e-18,3;UBERON:0006242,9.46e-18,3;UBERON:0000945,1.59e-07,8;UBERON:0010039,1.59e-07,8;UBERON:0002294,8.37e-07,9;UBERON:0001173,8.37e-07,9;UBERON:0004912,8.37e-07,9 | |||
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|short_description=p2@SLC9A4 | |short_description=p2@SLC9A4 | ||
}} | }} |
Latest revision as of 02:41, 16 September 2015
Short description: | p2@SLC9A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC9A4_5end |
Coexpression cluster: | C42_small_lung_maxillary_pharyngeal_Mesenchymal_Wilms_colon |
Association with transcript: | 0bp_to_ENST00000295269, NM_001011552, uc002tbz.3_5end |
EntrezGene: | SLC9A4 |
HGNC: | 11077 |
UniProt: | Q6AI14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gallbladder | 9.46e-18 | 3 |
gall bladder primordium | 9.46e-18 | 3 |
stomach | 1.59e-07 | 8 |
food storage organ | 1.59e-07 | 8 |
biliary system | 8.37e-07 | 9 |
biliary tree | 8.37e-07 | 9 |
biliary bud | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 8.82e-14 | 4 |
bronchus cancer | 1.89e-08 | 7 |
bronchogenic carcinoma | 1.89e-08 | 7 |
lung carcinoma | 7.48e-07 | 9 |