FFCP PHASE1:Hg19::chr16:30406721..30406820,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=197407 | |EntrezGene=197407 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13114 | |HGNC=13114 | ||
|TSSclassifier=strong | |||
|UniProt=Q96MX3 | |UniProt=Q96MX3 | ||
|association_with_transcript=0bp_to_ENST00000320159,NM_152652,uc002dxz.1_5end | |association_with_transcript=0bp_to_ENST00000320159,NM_152652,uc002dxz.1_5end | ||
|cluster_id=chr16:30406721..30406820,+ | |||
|description=CAGE_peak_1_at_ZNF48_5end | |description=CAGE_peak_1_at_ZNF48_5end | ||
|id=chr16:30406721..30406820,+ | |id=chr16:30406721..30406820,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!9.93e-07!254 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.81e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0001893;1.34e-08;34!UBERON:0000956;1.49e-08;25!UBERON:0000203;1.49e-08;25!UBERON:0001869;1.66e-08;32!UBERON:0003528;2.75e-08;34!UBERON:0002020;2.75e-08;34!UBERON:0002791;3.03e-08;32!UBERON:0000073;1.66e-07;53!UBERON:0002616;1.66e-07;53!UBERON:0002780;2.65e-07;41!UBERON:0001890;2.65e-07;41!UBERON:0002619;3.52e-07;22!UBERON:0001950;3.69e-07;20 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.98e-17!94;UBERON:0001016!7.98e-17!94;UBERON:0005743!1.40e-15!86;UBERON:0001017!4.79e-15!82;UBERON:0002346!6.59e-14!90;UBERON:0003075!1.51e-13!86;UBERON:0007284!1.51e-13!86;UBERON:0003056!2.94e-12!61;UBERON:0001049!3.90e-12!57;UBERON:0005068!3.90e-12!57;UBERON:0006241!3.90e-12!57;UBERON:0007135!3.90e-12!57;UBERON:0000955!1.51e-11!69;UBERON:0006238!1.51e-11!69;UBERON:0002616!2.90e-10!59;UBERON:0003080!5.45e-10!42;UBERON:0001893!6.87e-10!34;UBERON:0000025!1.03e-09!194;UBERON:0002780!1.04e-09!41;UBERON:0001890!1.04e-09!41;UBERON:0006240!1.04e-09!41;UBERON:0002020!1.65e-09!34;UBERON:0003528!1.65e-09!34;UBERON:0001869!1.91e-09!32;UBERON:0002791!1.97e-09!33;UBERON:0000956!1.17e-08!25;UBERON:0000203!1.17e-08!25;UBERON:0000924!1.73e-08!173;UBERON:0006601!1.73e-08!173;UBERON:0004121!3.96e-08!169;UBERON:0007023!5.58e-08!115;UBERON:0000064!9.97e-08!219;UBERON:0002619!2.55e-07!22;UBERON:0001950!2.56e-07!20;UBERON:0004111!3.40e-07!241;UBERON:0000483!4.43e-07!309;UBERON:0000119!7.72e-07!312;UBERON:0000477!8.47e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.34e-08;34!UBERON:0000956;1.49e-08;25!UBERON:0000203;1.49e-08;25!UBERON:0001869;1.66e-08;32!UBERON:0003528;2.75e-08;34!UBERON:0002020;2.75e-08;34!UBERON:0002791;3.03e-08;32!UBERON:0000073;1.66e-07;53!UBERON:0002616;1.66e-07;53!UBERON:0002780;2.65e-07;41!UBERON:0001890;2.65e-07;41!UBERON:0002619;3.52e-07;22!UBERON:0001950;3.69e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.43e-16,89;UBERON:0001017,9.19e-15,81;UBERON:0002346,3.63e-14,86;UBERON:0003075,8.16e-14,82;UBERON:0007284,8.16e-14,82;UBERON:0011216,1.50e-12,223;UBERON:0003056,1.66e-12,61;UBERON:0001049,7.43e-12,56;UBERON:0005068,7.43e-12,56;UBERON:0006241,7.43e-12,56;UBERON:0007135,7.43e-12,56;UBERON:0000073,7.97e-12,53;UBERON:0002616,7.97e-12,53;UBERON:0000955,2.80e-11,68;UBERON:0006238,2.80e-11,68;UBERON:0001893,6.82e-10,34;UBERON:0000025,6.99e-10,192;UBERON:0002780,1.03e-09,41;UBERON:0001890,1.03e-09,41;UBERON:0003080,1.03e-09,41;UBERON:0006240,1.03e-09,41;UBERON:0003528,1.64e-09,34;UBERON:0002020,1.64e-09,34;UBERON:0001869,1.89e-09,32;UBERON:0002791,2.87e-09,32;UBERON:0010371,3.89e-09,104;UBERON:0000956,1.16e-08,25;UBERON:0000203,1.16e-08,25;UBERON:0004121,7.06e-08,171;UBERON:0000924,7.06e-08,171;UBERON:0006601,7.06e-08,171;UBERON:0007023,1.17e-07,114;UBERON:0002619,2.54e-07,22;UBERON:0001950,2.55e-07,20;UBERON:0004111,3.29e-07,240;UBERON:0000483,9.93e-07,306 | |||
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| ||
|short_description=p1@ZNF48 | |short_description=p1@ZNF48 | ||
}} | }} |
Latest revision as of 07:41, 16 September 2015
Short description: | p1@ZNF48 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZNF48_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000320159, NM_152652, uc002dxz.1_5end |
EntrezGene: | ZNF48 |
HGNC: | 13114 |
UniProt: | Q96MX3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.81e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.43e-16 | 89 |
central nervous system | 9.19e-15 | 81 |
neurectoderm | 3.63e-14 | 86 |
neural plate | 8.16e-14 | 82 |
presumptive neural plate | 8.16e-14 | 82 |
organ system subdivision | 1.50e-12 | 223 |
pre-chordal neural plate | 1.66e-12 | 61 |
neural tube | 7.43e-12 | 56 |
neural rod | 7.43e-12 | 56 |
future spinal cord | 7.43e-12 | 56 |
neural keel | 7.43e-12 | 56 |
regional part of nervous system | 7.97e-12 | 53 |
regional part of brain | 7.97e-12 | 53 |
brain | 2.80e-11 | 68 |
future brain | 2.80e-11 | 68 |
telencephalon | 6.82e-10 | 34 |
tube | 6.99e-10 | 192 |
regional part of forebrain | 1.03e-09 | 41 |
forebrain | 1.03e-09 | 41 |
anterior neural tube | 1.03e-09 | 41 |
future forebrain | 1.03e-09 | 41 |
brain grey matter | 1.64e-09 | 34 |
gray matter | 1.64e-09 | 34 |
cerebral hemisphere | 1.89e-09 | 32 |
regional part of telencephalon | 2.87e-09 | 32 |
ecto-epithelium | 3.89e-09 | 104 |
cerebral cortex | 1.16e-08 | 25 |
pallium | 1.16e-08 | 25 |
ectoderm-derived structure | 7.06e-08 | 171 |
ectoderm | 7.06e-08 | 171 |
presumptive ectoderm | 7.06e-08 | 171 |
adult organism | 1.17e-07 | 114 |
regional part of cerebral cortex | 2.54e-07 | 22 |
neocortex | 2.55e-07 | 20 |
anatomical conduit | 3.29e-07 | 240 |
epithelium | 9.93e-07 | 306 |