FFCP PHASE1:Hg19::chr22:36424988..36425008,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23543 | |EntrezGene=23543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=9906 | |HGNC=9906 | ||
|TSSclassifier=strong | |||
|UniProt=O43251 | |UniProt=O43251 | ||
|association_with_transcript=-403bp_to_NM_001082578,NM_001082579,uc003aon.3,uc003aoo.3_5end | |association_with_transcript=-403bp_to_NM_001082578,NM_001082579,uc003aon.3,uc003aoo.3_5end | ||
|cluster_id=chr22:36424988..36425008,- | |||
|description=CAGE_peak_7_at_RBFOX2_5end | |description=CAGE_peak_7_at_RBFOX2_5end | ||
|id=chr22:36424988..36425008,- | |id=chr22:36424988..36425008,- | ||
|ontology_enrichment_celltype=CL:0000039;8.40e-08;7!CL:0000586;8.40e-08;7!CL:0000540;6.52e-07;6!CL:0000404;6.52e-07;6 | |ontology_enrichment_celltype=CL:0000133!1.71e-07!59 | ||
| | |ontology_enrichment_celltype_v019=CL:0000039;8.40e-08;7!CL:0000586;8.40e-08;7!CL:0000540;6.52e-07;6!CL:0000404;6.52e-07;6 | ||
|ontology_enrichment_disease=DOID:3095;3.71e-12;22!DOID:2994;3.71e-12;22 | |ontology_enrichment_celltype_v019_2=CL:0000039,7.26e-08,7;CL:0000586,7.26e-08,7;CL:0000540,3.41e-07,6;CL:0000031,3.41e-07,6;CL:0000404,3.41e-07,6 | ||
|ontology_enrichment_uberon=UBERON:0001893;2.53e-10;34!UBERON:0002791;8.46e-10;32!UBERON:0001869;8.81e-10;32!UBERON:0003528;1.80e-09;34!UBERON:0002020;1.80e-09;34!UBERON:0002780;2.29e-08;41!UBERON:0001890;2.29e-08;41!UBERON:0000956;2.51e-08;25!UBERON:0000203;2.51e-08;25!UBERON:0001950;3.40e-08;20!UBERON:0002619;4.99e-08;22!UBERON:0000922;5.75e-08;49!UBERON:0000073;6.58e-07;53!UBERON:0002616;6.58e-07;53 | |ontology_enrichment_development_v019=CL:0000031;6.52e-07;6!UBERON:0009117;7.91e-07;10!UBERON:0005564;7.91e-07;10 | ||
|ontology_enrichment_disease=DOID:0050687!2.01e-09!143;DOID:3095!1.57e-08!22;DOID:2994!1.57e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;3.71e-12;22!DOID:2994;3.71e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.37e-12,22;DOID:2994,1.37e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0000924!1.36e-16!173;UBERON:0006601!1.36e-16!173;UBERON:0004121!3.94e-15!169;UBERON:0000468!5.52e-14!659;UBERON:0000064!8.58e-13!219;UBERON:0000073!1.35e-12!94;UBERON:0001016!1.35e-12!94;UBERON:0000475!2.36e-12!365;UBERON:0005743!4.70e-12!86;UBERON:0000481!9.91e-12!347;UBERON:0001017!1.61e-11!82;UBERON:0002346!2.66e-11!90;UBERON:0000922!1.44e-10!612;UBERON:0003075!7.41e-10!86;UBERON:0007284!7.41e-10!86;UBERON:0000119!1.26e-09!312;UBERON:0000467!2.01e-09!625;UBERON:0000480!2.17e-09!626;UBERON:0000483!2.54e-09!309;UBERON:0001893!7.68e-09!34;UBERON:0000955!9.77e-09!69;UBERON:0006238!9.77e-09!69;UBERON:0002050!1.07e-08!605;UBERON:0005423!1.07e-08!605;UBERON:0000033!1.13e-08!123;UBERON:0002791!1.63e-08!33;UBERON:0000923!1.67e-08!604;UBERON:0005291!1.67e-08!604;UBERON:0006598!1.67e-08!604;UBERON:0002532!1.67e-08!604;UBERON:0003056!2.31e-08!61;UBERON:0002020!2.65e-08!34;UBERON:0003528!2.65e-08!34;UBERON:0001869!3.05e-08!32;UBERON:0002780!4.12e-08!41;UBERON:0001890!4.12e-08!41;UBERON:0006240!4.12e-08!41;UBERON:0001049!4.69e-08!57;UBERON:0005068!4.69e-08!57;UBERON:0006241!4.69e-08!57;UBERON:0007135!4.69e-08!57;UBERON:0000062!6.75e-08!511;UBERON:0002616!1.12e-07!59;UBERON:0003080!1.63e-07!42;UBERON:0000153!1.84e-07!129;UBERON:0007811!1.84e-07!129;UBERON:0000477!3.80e-07!286;UBERON:0004111!7.71e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.53e-10;34!UBERON:0002791;8.46e-10;32!UBERON:0001869;8.81e-10;32!UBERON:0003528;1.80e-09;34!UBERON:0002020;1.80e-09;34!UBERON:0002780;2.29e-08;41!UBERON:0001890;2.29e-08;41!UBERON:0000956;2.51e-08;25!UBERON:0000203;2.51e-08;25!UBERON:0001950;3.40e-08;20!UBERON:0002619;4.99e-08;22!UBERON:0000922;5.75e-08;49!UBERON:0000073;6.58e-07;53!UBERON:0002616;6.58e-07;53 | |||
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| ||
|short_description=p7@RBFOX2 | |short_description=p7@RBFOX2 | ||
}} | }} |
Latest revision as of 01:19, 20 September 2015
Short description: | p7@RBFOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RBFOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | -403bp_to_NM_001082578, NM_001082579, uc003aon.3, uc003aoo.3_5end |
EntrezGene: | RBFOX2 |
HGNC: | 9906 |
UniProt: | O43251 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 7.26e-08 | 7 |
germ cell | 7.26e-08 | 7 |
neuron | 3.41e-07 | 6 |
neuroblast | 3.41e-07 | 6 |
electrically signaling cell | 3.41e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.98e-14 | 89 |
central nervous system | 3.93e-13 | 81 |
telencephalon | 4.60e-13 | 34 |
ectoderm-derived structure | 9.46e-13 | 171 |
ectoderm | 9.46e-13 | 171 |
presumptive ectoderm | 9.46e-13 | 171 |
neurectoderm | 2.60e-12 | 86 |
regional part of forebrain | 3.31e-12 | 41 |
forebrain | 3.31e-12 | 41 |
anterior neural tube | 3.31e-12 | 41 |
future forebrain | 3.31e-12 | 41 |
regional part of telencephalon | 3.43e-12 | 32 |
cerebral hemisphere | 3.90e-12 | 32 |
brain grey matter | 4.40e-12 | 34 |
gray matter | 4.40e-12 | 34 |
regional part of nervous system | 5.66e-12 | 53 |
regional part of brain | 5.66e-12 | 53 |
neural tube | 1.67e-11 | 56 |
neural rod | 1.67e-11 | 56 |
future spinal cord | 1.67e-11 | 56 |
neural keel | 1.67e-11 | 56 |
pre-chordal neural plate | 4.95e-11 | 61 |
neural plate | 7.68e-11 | 82 |
presumptive neural plate | 7.68e-11 | 82 |
brain | 1.73e-10 | 68 |
future brain | 1.73e-10 | 68 |
structure with developmental contribution from neural crest | 1.92e-10 | 132 |
cerebral cortex | 5.02e-09 | 25 |
pallium | 5.02e-09 | 25 |
neocortex | 5.71e-09 | 20 |
ecto-epithelium | 1.27e-08 | 104 |
regional part of cerebral cortex | 1.33e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.37e-12 | 22 |
germ cell cancer | 1.37e-12 | 22 |