FFCP PHASE1:Hg19::chr2:85893272..85893280,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6439 | |EntrezGene=6439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=10801 | |HGNC=10801 | ||
|TSSclassifier=strong | |||
|UniProt=P07988 | |UniProt=P07988 | ||
|association_with_transcript=-376bp_to_M19097_5end | |association_with_transcript=-376bp_to_M19097_5end | ||
|cluster_id=chr2:85893272..85893280,- | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_18_at_SFTPB_5end | |description=CAGE_peak_18_at_SFTPB_5end | ||
|id=chr2:85893272..85893280,- | |id=chr2:85893272..85893280,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.85e-13;29!UBERON:0001041;9.88e-13;30 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002171;6.62e-41;1!UBERON:0006518;6.62e-41;1!UBERON:0008949;6.62e-41;1!UBERON:0000101;6.62e-41;1!UBERON:0002167;6.62e-41;1!UBERON:0002048;4.85e-17;22!UBERON:0000117;4.85e-17;22!UBERON:0000171;4.85e-17;22!UBERON:0000170;4.85e-17;22!UBERON:0005178;3.70e-10;34!UBERON:0002224;3.70e-10;34!UBERON:0000065;3.13e-08;44!UBERON:0005181;4.23e-08;35 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002171!1.07e-23!1;UBERON:0006518!1.07e-23!1;UBERON:0008949!1.07e-23!1;UBERON:0000101!1.07e-23!1;UBERON:0002167!1.07e-23!1;UBERON:0002048!8.86e-10!22;UBERON:0000117!8.86e-10!22;UBERON:0000171!8.86e-10!22;UBERON:0000170!8.86e-10!22;UBERON:0005597!8.86e-10!22;UBERON:0000118!8.86e-10!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002171;6.62e-41;1!UBERON:0006518;6.62e-41;1!UBERON:0008949;6.62e-41;1!UBERON:0000101;6.62e-41;1!UBERON:0002167;6.62e-41;1!UBERON:0002048;4.85e-17;22!UBERON:0000117;4.85e-17;22!UBERON:0000171;4.85e-17;22!UBERON:0000170;4.85e-17;22!UBERON:0005178;3.70e-10;34!UBERON:0002224;3.70e-10;34!UBERON:0000065;3.13e-08;44!UBERON:0005181;4.23e-08;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002171,6.62e-41,1;UBERON:0006518,6.62e-41,1;UBERON:0008949,6.62e-41,1;UBERON:0000101,6.62e-41,1;UBERON:0002167,6.62e-41,1;UBERON:0002048,5.13e-17,22;UBERON:0000117,5.13e-17,22;UBERON:0000171,5.13e-17,22;UBERON:0000170,5.13e-17,22;UBERON:0005597,5.13e-17,22;UBERON:0000118,5.13e-17,22;UBERON:0005178,2.57e-11,34;UBERON:0002224,2.57e-11,34;UBERON:0005181,5.12e-11,35;UBERON:0005153,1.83e-10,37;UBERON:0008947,3.28e-10,38;UBERON:0003258,3.28e-10,38;UBERON:0005157,2.10e-08,47;UBERON:0000915,1.15e-07,52;UBERON:0000065,2.08e-07,54 | |||
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|short_description=p18@SFTPB | |short_description=p18@SFTPB | ||
}} | }} |
Latest revision as of 17:23, 18 September 2015
Short description: | p18@SFTPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SFTPB_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | -376bp_to_M19097_5end |
EntrezGene: | SFTPB |
HGNC: | 10801 |
UniProt: | P07988 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lower lobe of right lung | 6.62e-41 | 1 |
right lung lobe | 6.62e-41 | 1 |
lower lobe of lung | 6.62e-41 | 1 |
lobe of lung | 6.62e-41 | 1 |
right lung | 6.62e-41 | 1 |
lung | 5.13e-17 | 22 |
respiratory tube | 5.13e-17 | 22 |
respiration organ | 5.13e-17 | 22 |
pair of lungs | 5.13e-17 | 22 |
lung primordium | 5.13e-17 | 22 |
lung bud | 5.13e-17 | 22 |
thoracic cavity element | 2.57e-11 | 34 |
thoracic cavity | 2.57e-11 | 34 |
thoracic segment organ | 5.12e-11 | 35 |
epithelial bud | 1.83e-10 | 37 |
respiratory primordium | 3.28e-10 | 38 |
endoderm of foregut | 3.28e-10 | 38 |
epithelial fold | 2.10e-08 | 47 |
thoracic segment of trunk | 1.15e-07 | 52 |
respiratory tract | 2.08e-07 | 54 |