FFCP PHASE1:Hg19::chr13:74185233..74185247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:74185233..74185247,+ | |||
|coexpression_cluster_id=C1386 | |coexpression_cluster_id=C1386 | ||
|description=CAGE_peak_at_chr13:74185233..74185247,+ | |description=CAGE_peak_at_chr13:74185233..74185247,+ | ||
|id=chr13:74185233..74185247,+ | |id=chr13:74185233..74185247,+ | ||
|ontology_enrichment_celltype=CL:0000083;1.63e-09;4 | |ontology_enrichment_celltype=CL:1001319!7.82e-07!1;CL:1000600!7.82e-07!1 | ||
| | |ontology_enrichment_celltype_v019=CL:0000083;1.63e-09;4 | ||
|ontology_enrichment_disease=DOID:3493;5.48e-18;2!DOID:4929;1.17e-17;2!DOID:1793;1.63e-09;4!DOID:4362;6.13e-08;5!DOID:170;9.23e-07;6 | |ontology_enrichment_celltype_v019_2=CL:0000083,1.57e-09,4 | ||
|ontology_enrichment_uberon=UBERON:0003127;6.54e-66;2!UBERON:0003126;9.95e-20;7!UBERON:0001005;9.95e-20;7!UBERON:0007196;9.04e-10;15!UBERON:0001558;9.04e-10;15!UBERON:0000002;8.02e-07;6!UBERON:0001560;8.02e-07;6 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!8.98e-10!14;DOID:305!1.70e-08!106;DOID:3151!7.39e-07!1;DOID:3149!7.39e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.48e-18;2!DOID:4929;1.17e-17;2!DOID:1793;1.63e-09;4!DOID:4362;6.13e-08;5!DOID:170;9.23e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.48e-18,2;DOID:4929,1.07e-17,2;DOID:1793,1.57e-09,4;DOID:4362,6.13e-08,5;DOID:170,8.97e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0003127!1.22e-12!2;UBERON:0006562!4.98e-12!11;UBERON:0000002!6.22e-09!6;UBERON:0001560!6.22e-09!6;UBERON:0000974!9.29e-09!10;UBERON:0001042!1.07e-08!10;UBERON:0009145!1.07e-08!10;UBERON:0000344!2.11e-07!12;UBERON:0004119!2.30e-07!169;UBERON:0000925!2.30e-07!169;UBERON:0006595!2.30e-07!169;UBERON:0001007!2.33e-07!155;UBERON:0001555!2.33e-07!155;UBERON:0007026!2.33e-07!155;UBERON:0007029!5.57e-07!1;UBERON:0004645!7.82e-07!1;UBERON:0001256!7.82e-07!1;UBERON:0001259!7.82e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.54e-66;2!UBERON:0003126;9.95e-20;7!UBERON:0001005;9.95e-20;7!UBERON:0007196;9.04e-10;15!UBERON:0001558;9.04e-10;15!UBERON:0000002;8.02e-07;6!UBERON:0001560;8.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,7.73e-66,2;UBERON:0003126,1.04e-19,7;UBERON:0001005,1.04e-19,7;UBERON:0007196,9.25e-10,15;UBERON:0001558,9.25e-10,15;UBERON:0000002,8.02e-07,6;UBERON:0001560,8.02e-07,6 | |||
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|short_description=p@chr13:74185233..74185247,+ | |short_description=p@chr13:74185233..74185247,+ | ||
}} | }} |
Latest revision as of 17:03, 24 July 2015
Short description: | p@chr13:74185233..74185247, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:74185233..74185247, + |
Coexpression cluster: | C1386_cervical_signet_anaplastic_tubular_trachea_skin_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of pancreas | 1.57e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 7.73e-66 | 2 |
trachea | 1.04e-19 | 7 |
respiratory airway | 1.04e-19 | 7 |
tracheobronchial tree | 9.25e-10 | 15 |
lower respiratory tract | 9.25e-10 | 15 |
uterine cervix | 8.02e-07 | 6 |
neck of organ | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
tubular adenocarcinoma | 1.07e-17 | 2 |
pancreatic cancer | 1.57e-09 | 4 |
cervical cancer | 6.13e-08 | 5 |
endocrine gland cancer | 8.97e-07 | 6 |