FFCP PHASE1:Hg19::chr17:28562714..28562717,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6532 | |EntrezGene=6532 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11050 | |HGNC=11050 | ||
|TSSclassifier=strong | |||
|UniProt=P31645 | |UniProt=P31645 | ||
|association_with_transcript=0bp_to_ENST00000394821_5end | |association_with_transcript=0bp_to_ENST00000394821_5end | ||
|cluster_id=chr17:28562714..28562717,- | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_1_at_SLC6A4_5end | |description=CAGE_peak_1_at_SLC6A4_5end | ||
|id=chr17:28562714..28562717,- | |id=chr17:28562714..28562717,- | ||
|ontology_enrichment_celltype=CL:0000632;9.54e-08;3!CL:0002590;2.19e-07;3 | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019=CL:0000632;9.54e-08;3!CL:0002590;2.19e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000632,7.53e-08,3;CL:0002590,1.93e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002298;4.12e-21;6!UBERON:0000988;1.74e-16;3!UBERON:0002148;1.18e-11;2!UBERON:0006331;1.18e-11;2!UBERON:0009662;1.18e-11;2!UBERON:0001905;2.57e-11;2!UBERON:0002757;2.57e-11;2!UBERON:0010134;2.57e-11;2!UBERON:0005408;2.57e-11;2!UBERON:0001899;2.57e-11;2!UBERON:0004733;1.92e-10;12!UBERON:0002028;1.92e-10;12!UBERON:0004732;1.28e-09;13!UBERON:0003978;1.48e-07;3!UBERON:0000946;1.48e-07;3!UBERON:0001896;2.19e-07;3!UBERON:0005290;2.19e-07;3!UBERON:0002171;7.48e-07;1!UBERON:0006518;7.48e-07;1!UBERON:0008949;7.48e-07;1!UBERON:0000101;7.48e-07;1!UBERON:0002167;7.48e-07;1 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.28e-15!115;UBERON:0000178!3.46e-13!15;UBERON:0000179!3.46e-13!15;UBERON:0000463!3.46e-13!15;UBERON:0001009!1.09e-11!113;UBERON:0004535!2.96e-11!110;UBERON:0000988!2.30e-08!3;UBERON:0007100!1.10e-07!27;UBERON:0002298!1.53e-07!8;UBERON:0000948!2.46e-07!24;UBERON:0005498!2.46e-07!24;UBERON:0004140!2.46e-07!24;UBERON:0009881!2.46e-07!24;UBERON:0004141!2.46e-07!24;UBERON:0003084!2.46e-07!24;UBERON:0007005!2.46e-07!24;UBERON:0004139!2.46e-07!24;UBERON:0004291!2.46e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;4.12e-21;6!UBERON:0000988;1.74e-16;3!UBERON:0002148;1.18e-11;2!UBERON:0006331;1.18e-11;2!UBERON:0009662;1.18e-11;2!UBERON:0001905;2.57e-11;2!UBERON:0002757;2.57e-11;2!UBERON:0010134;2.57e-11;2!UBERON:0005408;2.57e-11;2!UBERON:0001899;2.57e-11;2!UBERON:0004733;1.92e-10;12!UBERON:0002028;1.92e-10;12!UBERON:0004732;1.28e-09;13!UBERON:0003978;1.48e-07;3!UBERON:0000946;1.48e-07;3!UBERON:0001896;2.19e-07;3!UBERON:0005290;2.19e-07;3!UBERON:0002171;7.48e-07;1!UBERON:0006518;7.48e-07;1!UBERON:0008949;7.48e-07;1!UBERON:0000101;7.48e-07;1!UBERON:0002167;7.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002298,3.96e-21,6;UBERON:0000988,1.66e-16,3;UBERON:0004797,6.99e-12,7;UBERON:0002148,1.12e-11,2;UBERON:0006331,1.12e-11,2;UBERON:0009662,1.12e-11,2;UBERON:0003076,1.40e-11,15;UBERON:0003057,1.40e-11,15;UBERON:0001905,2.44e-11,2;UBERON:0002757,2.44e-11,2;UBERON:0010134,2.44e-11,2;UBERON:0005408,2.44e-11,2;UBERON:0001899,2.44e-11,2;UBERON:0004733,1.88e-10,12;UBERON:0002028,1.88e-10,12;UBERON:0007277,1.88e-10,12;UBERON:0000025,8.26e-10,192;UBERON:0004732,1.26e-09,13;UBERON:0004535,1.74e-09,109;UBERON:0001009,3.90e-09,112;UBERON:0007023,4.05e-09,114;UBERON:0003978,1.58e-07,3;UBERON:0009751,1.58e-07,3;UBERON:0000946,1.58e-07,3;UBERON:0002523,1.58e-07,3;UBERON:0005983,1.58e-07,3;UBERON:0002165,1.58e-07,3;UBERON:0002062,1.58e-07,3;UBERON:0007280,1.58e-07,3;UBERON:0001896,2.20e-07,3;UBERON:0005290,2.20e-07,3;UBERON:0010096,2.20e-07,3;UBERON:0002171,7.49e-07,1;UBERON:0006518,7.49e-07,1;UBERON:0008949,7.49e-07,1;UBERON:0000101,7.49e-07,1;UBERON:0002167,7.49e-07,1;UBERON:0004111,7.70e-07,240 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68511379871414,0,0,0.144846518960824,0,0,0,0,0,11.2642004928033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,4.05217637326655,0,8.89193524321323,0.709336764396714,8.97084160227691,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,10.2906097969879,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83331112147576,0,0,0,0,0,1.5743737541619,0,1.2655176988749,1.90630193923825,0,0,1.59101623962968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75380354101505,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,5.93105944893709,0,0,0,0,0.507447609232169,0.764637207142375,3.41788312304498,0.952927101831156,0.411362273086194,0.648473311192717,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,1.0077309914171,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31631238292384,0,0,0,0,0.46112780877612,0.448788222048861,10.1042055887468,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,2.97908551215189,0,0.798716001995964,0,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,12.0331667585848,0,0,17.9402853113727,2.20086027139532,68.7636831876345,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44207766997908,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,31.6064083168189,1.3451348888753,0,0,10.1120701985408,0,0,3.73833531372574,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0,0,0,0.432626562123789,0,0,0,0,0,0,2.005660314339,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,0.383829398097213,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68511379871414,0,0,0.144846518960824,0,0,0,0,0,11.2642004928033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,4.05217637326655,0,8.89193524321323,0.709336764396714,8.97084160227691,0,0,0.311211035399766,0.269421344139376,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02088964844019,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,10.2906097969879,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.410635780069046,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.72807587357917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83331112147576,0,0,0,0,0,1.5743737541619,0,1.2655176988749,1.90630193923825,0,0,1.59101623962968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75380354101505,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,5.93105944893709,0,0,0,0,0.507447609232169,0.764637207142375,3.41788312304498,0.952927101831156,0.411362273086194,0.648473311192717,1.08006287447623,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,1.0077309914171,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31631238292384,0,0,0,0,0.46112780877612,0.448788222048861,10.1042055887468,0.31900115973192,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11712960508902,2.97908551215189,0,0.798716001995964,0,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87848869084652,12.0331667585848,0,0,17.9402853113727,2.20086027139532,68.7636831876345,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44207766997908,1.30402446176905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135075169236789,0,0,0,0,0,0,0,0,31.6064083168189,1.3451348888753,0,0,10.1120701985408,0,0,3.73833531372574,0.0657727735628491,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0.245148321753905,0,0,0,1.2679671827502,0,0,0,0,0,0,0,0,0,0,0,0,0.872701380680755,0,0,0,0.432626562123789,0,0,0,0,0,0,2.005660314339,0.227336094654718,0,0,0,0.213233981900981,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | ||
|short_description=p1@SLC6A4 | |short_description=p1@SLC6A4 | ||
}} | }} |
Latest revision as of 09:49, 19 September 2015
Short description: | p1@SLC6A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SLC6A4_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 0bp_to_ENST00000394821_5end |
EntrezGene: | SLC6A4 |
HGNC: | 11050 |
UniProt: | P31645 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 7.53e-08 | 3 |
smooth muscle cell of the brain vasculature | 1.93e-07 | 3 |