FFCP PHASE1:Hg19::chr6:111888474..111888487,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10758 | |EntrezGene=10758 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1343 | |HGNC=1343 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000368730,ENST00000464903_5end | |association_with_transcript=0bp_to_ENST00000368730,ENST00000464903_5end | ||
|cluster_id=chr6:111888474..111888487,- | |||
|description=CAGE_peak_11_at_TRAF3IP2_5end | |description=CAGE_peak_11_at_TRAF3IP2_5end | ||
|id=chr6:111888474..111888487,- | |id=chr6:111888474..111888487,- | ||
|ontology_enrichment_celltype=CL:0000115!3.28e-17!35;CL:0002139!7.81e-17!24;CL:0000071!1.07e-12!18;CL:0002546!1.07e-12!18;CL:0002078!5.56e-12!44;CL:0000213!1.54e-07!57;CL:0000215!1.54e-07!57;CL:1000413!8.24e-07!9 | |ontology_enrichment_celltype=CL:0000115!3.28e-17!35;CL:0002139!7.81e-17!24;CL:0000071!1.07e-12!18;CL:0002546!1.07e-12!18;CL:0002078!5.56e-12!44;CL:0000213!1.54e-07!57;CL:0000215!1.54e-07!57;CL:1000413!8.24e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000115;1.21e-26;36!CL:0002139;3.47e-26;24!CL:0000071;9.60e-19;18!CL:0002078;6.38e-16;45!CL:0000213;1.42e-13;58!CL:0000215;1.42e-13;58!CL:0002545;7.24e-12;2!CL:0002367;7.24e-12;2!CL:0002138;4.45e-09;6!CL:0002144;6.41e-09;3!CL:0002544;6.71e-09;6!CL:0002543;1.01e-08;6!CL:0002618;3.36e-08;3!CL:0000817;9.23e-07;1!CL:0002601;9.23e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,8.89e-32,36;CL:0002139,3.12e-26,24;CL:0002078,8.73e-25,45;CL:0000071,6.55e-19,18;CL:0002546,6.55e-19,18;CL:0000213,1.62e-18,58;CL:0000215,1.62e-18,58;CL:0002545,3.70e-12,2;CL:0002367,4.39e-12,2;CL:0002544,4.27e-09,6;CL:0005020,6.11e-09,6;CL:0002138,6.11e-09,6;CL:0005022,6.11e-09,6;CL:0002144,6.42e-09,3;CL:0002543,1.02e-08,6;CL:0000222,2.12e-08,121;CL:0002618,4.20e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;9.60e-19;18!CL:0005022;4.45e-09;6!UBERON:0005754;9.23e-07;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1240;6.24e-09;39!DOID:2531;3.19e-07;51!DOID:0060083;3.19e-07;51!DOID:9119;9.23e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.41e-10,39;DOID:2531,1.96e-09,51;DOID:0060083,1.96e-09,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.83e-14!115;UBERON:0001986!1.07e-12!18;UBERON:0004638!1.07e-12!18;UBERON:0004852!1.07e-12!18;UBERON:0000487!1.47e-09!22;UBERON:0004111!7.34e-09!241;UBERON:0006914!6.78e-08!25;UBERON:0000477!1.11e-07!286;UBERON:0003915!8.24e-07!9;UBERON:0004700!8.24e-07!9;UBERON:0001917!8.24e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!8.83e-14!115;UBERON:0001986!1.07e-12!18;UBERON:0004638!1.07e-12!18;UBERON:0004852!1.07e-12!18;UBERON:0000487!1.47e-09!22;UBERON:0004111!7.34e-09!241;UBERON:0006914!6.78e-08!25;UBERON:0000477!1.11e-07!286;UBERON:0003915!8.24e-07!9;UBERON:0004700!8.24e-07!9;UBERON:0001917!8.24e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0004638;9.60e-19;18!UBERON:0001986;9.60e-19;18!UBERON:0004852;9.60e-19;18!UBERON:0000487;4.04e-15;22!UBERON:0006914;3.66e-13;25!UBERON:0005800;7.24e-12;2!UBERON:0005969;7.24e-12;2!UBERON:0001515;7.24e-12;2!UBERON:0003956;7.24e-12;2!UBERON:0010523;6.41e-09;3!UBERON:0001915;6.41e-09;3!UBERON:0001982;6.41e-09;3!UBERON:0000490;3.56e-08;33!UBERON:0005795;3.89e-07;1!UBERON:0002134;3.89e-07;1!UBERON:0005208;3.89e-07;1!UBERON:0004145;3.89e-07;1!UBERON:0005946;3.89e-07;1!UBERON:0005965;3.89e-07;1!UBERON:0002078;3.89e-07;1!UBERON:0001473;6.49e-07;8!UBERON:0004536;6.49e-07;8!UBERON:0006558;6.49e-07;8!UBERON:0000998;9.23e-07;1!UBERON:0002171;9.23e-07;1!UBERON:0006868;9.23e-07;1!UBERON:0006518;9.23e-07;1!UBERON:0008949;9.23e-07;1!UBERON:0000101;9.23e-07;1!UBERON:0002167;9.23e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.55e-19,18;UBERON:0001986,6.55e-19,18;UBERON:0004852,6.55e-19,18;UBERON:0000487,2.97e-15,22;UBERON:0006914,2.80e-13,25;UBERON:0005800,3.70e-12,2;UBERON:0001515,3.70e-12,2;UBERON:0005969,4.39e-12,2;UBERON:0003956,4.39e-12,2;UBERON:0002049,3.50e-11,78;UBERON:0007798,3.50e-11,78;UBERON:0000055,1.51e-09,68;UBERON:0010523,6.42e-09,3;UBERON:0001915,6.42e-09,3;UBERON:0001982,6.42e-09,3;UBERON:0004535,3.28e-07,109;UBERON:0002134,4.01e-07,1;UBERON:0005208,4.01e-07,1;UBERON:0005946,4.01e-07,1;UBERON:0005965,4.01e-07,1;UBERON:0002078,4.01e-07,1;UBERON:0001009,6.05e-07,112;UBERON:0001473,8.21e-07,8;UBERON:0004536,8.21e-07,8;UBERON:0006558,8.21e-07,8 | |||
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| ||
|short_description=p11@TRAF3IP2 | |short_description=p11@TRAF3IP2 | ||
}} | }} |
Latest revision as of 21:02, 19 September 2015
Short description: | p11@TRAF3IP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TRAF3IP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000368730, ENST00000464903_5end |
EntrezGene: | TRAF3IP2 |
HGNC: | 1343 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 8.89e-32 | 36 |
endothelial cell of vascular tree | 3.12e-26 | 24 |
meso-epithelial cell | 8.73e-25 | 45 |
blood vessel endothelial cell | 6.55e-19 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.55e-19 | 18 |
lining cell | 1.62e-18 | 58 |
barrier cell | 1.62e-18 | 58 |
thoracic aorta endothelial cell | 3.70e-12 | 2 |
trabecular meshwork cell | 4.39e-12 | 2 |
aortic endothelial cell | 4.27e-09 | 6 |
lymphangioblast | 6.11e-09 | 6 |
endothelial cell of lymphatic vessel | 6.11e-09 | 6 |
vascular lymphangioblast | 6.11e-09 | 6 |
capillary endothelial cell | 6.42e-09 | 3 |
vein endothelial cell | 1.02e-08 | 6 |
mesodermal cell | 2.12e-08 | 121 |
endothelial cell of umbilical vein | 4.20e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.55e-19 | 18 |
endothelium | 6.55e-19 | 18 |
cardiovascular system endothelium | 6.55e-19 | 18 |
simple squamous epithelium | 2.97e-15 | 22 |
squamous epithelium | 2.80e-13 | 25 |
segment of aorta | 3.70e-12 | 2 |
thoracic aorta | 3.70e-12 | 2 |
reticulum trabeculare | 4.39e-12 | 2 |
aqueous drainage system | 4.39e-12 | 2 |
vasculature | 3.50e-11 | 78 |
vascular system | 3.50e-11 | 78 |
vessel | 1.51e-09 | 68 |
microcirculatory vessel | 6.42e-09 | 3 |
endothelium of capillary | 6.42e-09 | 3 |
capillary | 6.42e-09 | 3 |
cardiovascular system | 3.28e-07 | 109 |
tricuspid valve | 4.01e-07 | 1 |
right atrium valve | 4.01e-07 | 1 |
outflow tract of atrium | 4.01e-07 | 1 |
outflow part of right atrium | 4.01e-07 | 1 |
right cardiac atrium | 4.01e-07 | 1 |
circulatory system | 6.05e-07 | 112 |
lymphatic vessel | 8.21e-07 | 8 |
lymph vasculature | 8.21e-07 | 8 |
lymphatic part of lymphoid system | 8.21e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.41e-10 | 39 |
hematologic cancer | 1.96e-09 | 51 |
immune system cancer | 1.96e-09 | 51 |