FFCP PHASE1:Hg19::chr1:205313640..205313654,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:205313640..205313654,-
|short_description=p10@KLHDC8A
|description=CAGE_peak_10_at_KLHDC8A_5end
|association_with_transcript=-330bp_to_ENST00000539253_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55220 | |EntrezGene=55220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25573 | |HGNC=25573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-330bp_to_ENST00000539253_5end | |||
|cluster_id=chr1:205313640..205313654,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_10_at_KLHDC8A_5end | |||
|id=chr1:205313640..205313654,- | |||
|ontology_enrichment_celltype=CL:0000764!1.48e-11!2;CL:0000765!1.48e-11!2;CL:0000050!1.48e-11!2;CL:0000038!1.48e-11!2;CL:0000558!1.48e-11!2;CL:0000547!1.48e-11!2;CL:0000549!1.48e-11!2;CL:0000550!1.48e-11!2;CL:0000552!1.48e-11!2;CL:0000650!1.69e-07!3;CL:1000618!1.69e-07!3;CL:1001318!1.69e-07!3;CL:0002173!1.69e-07!3;CL:1000500!1.69e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.05e-79;2!CL:0000558;1.05e-79;2!CL:0000333;3.22e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.05e-79,2;CL:0000765,1.05e-79,2;CL:0000050,1.05e-79,2;CL:0000038,1.05e-79,2;CL:0000558,1.05e-79,2;CL:0000547,1.05e-79,2;CL:0000549,1.05e-79,2;CL:0000550,1.05e-79,2;CL:0000552,1.05e-79,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.89e-53;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:169;6.78e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,7.25e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!8.86e-19!94;UBERON:0001016!8.86e-19!94;UBERON:0000955!1.59e-17!69;UBERON:0006238!1.59e-17!69;UBERON:0001049!1.95e-17!57;UBERON:0005068!1.95e-17!57;UBERON:0006241!1.95e-17!57;UBERON:0007135!1.95e-17!57;UBERON:0005743!5.87e-17!86;UBERON:0007023!9.12e-17!115;UBERON:0002616!9.76e-17!59;UBERON:0001017!4.38e-16!82;UBERON:0004733!2.79e-14!12;UBERON:0002028!2.79e-14!12;UBERON:0007277!2.79e-14!12;UBERON:0002680!8.99e-14!9;UBERON:0001895!8.99e-14!9;UBERON:0010092!8.99e-14!9;UBERON:0004732!3.91e-13!13;UBERON:0003075!6.13e-12!86;UBERON:0007284!6.13e-12!86;UBERON:0003076!2.66e-11!15;UBERON:0003057!2.66e-11!15;UBERON:0002346!2.98e-11!90;UBERON:0000033!1.55e-10!123;UBERON:0004121!1.69e-10!169;UBERON:0000924!3.85e-10!173;UBERON:0006601!3.85e-10!173;UBERON:0000153!7.43e-10!129;UBERON:0007811!7.43e-10!129;UBERON:0002780!2.50e-09!41;UBERON:0001890!2.50e-09!41;UBERON:0006240!2.50e-09!41;UBERON:0003080!4.53e-09!42;UBERON:0002037!2.74e-08!6;UBERON:0006215!2.74e-08!6;UBERON:0001869!7.92e-08!32;UBERON:0000200!1.34e-07!6;UBERON:0003567!1.69e-07!3;UBERON:0003838!1.69e-07!3;UBERON:0005169!1.69e-07!3;UBERON:0002321!1.69e-07!3;UBERON:0005215!1.69e-07!3;UBERON:0002303!1.69e-07!3;UBERON:0002319!1.69e-07!3;UBERON:0001950!2.05e-07!20;UBERON:0000988!2.41e-07!3;UBERON:0001893!2.59e-07!34;UBERON:0002020!2.74e-07!34;UBERON:0003528!2.74e-07!34;UBERON:0003056!5.30e-07!61;UBERON:0000025!6.39e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;3.55e-27;6!UBERON:0002680;1.61e-18;9!UBERON:0001895;1.61e-18;9!UBERON:0004733;3.59e-14;12!UBERON:0002028;3.59e-14;12!UBERON:0004732;3.64e-13;13!UBERON:0000013;3.22e-09;5!UBERON:0002410;3.22e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.11e-27,6;UBERON:0006215,3.11e-27,6;UBERON:0002680,1.48e-18,9;UBERON:0001895,1.48e-18,9;UBERON:0010092,1.48e-18,9;UBERON:0004733,3.36e-14,12;UBERON:0002028,3.36e-14,12;UBERON:0007277,3.36e-14,12;UBERON:0004732,3.43e-13,13;UBERON:0003076,1.42e-11,15;UBERON:0003057,1.42e-11,15;UBERON:0000013,3.49e-09,5;UBERON:0002410,3.49e-09,5 | |||
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|short_description=p10@KLHDC8A | |||
}} | }} |
Latest revision as of 02:46, 20 September 2015
Short description: | p10@KLHDC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_KLHDC8A_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -330bp_to_ENST00000539253_5end |
EntrezGene: | KLHDC8A |
HGNC: | 25573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.05e-79 | 2 |
erythroblast | 1.05e-79 | 2 |
megakaryocyte-erythroid progenitor cell | 1.05e-79 | 2 |
erythroid progenitor cell | 1.05e-79 | 2 |
reticulocyte | 1.05e-79 | 2 |
proerythroblast | 1.05e-79 | 2 |
basophilic erythroblast | 1.05e-79 | 2 |
polychromatophilic erythroblast | 1.05e-79 | 2 |
orthochromatic erythroblast | 1.05e-79 | 2 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.11e-27 | 6 |
rhombic lip | 3.11e-27 | 6 |
regional part of metencephalon | 1.48e-18 | 9 |
metencephalon | 1.48e-18 | 9 |
future metencephalon | 1.48e-18 | 9 |
segmental subdivision of hindbrain | 3.36e-14 | 12 |
hindbrain | 3.36e-14 | 12 |
presumptive hindbrain | 3.36e-14 | 12 |
segmental subdivision of nervous system | 3.43e-13 | 13 |
posterior neural tube | 1.42e-11 | 15 |
chordal neural plate | 1.42e-11 | 15 |
sympathetic nervous system | 3.49e-09 | 5 |
autonomic nervous system | 3.49e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 7.25e-08 | 6 |