FFCP PHASE1:Hg19::chr1:222817717..222817738,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=375056 | |EntrezGene=375056 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24008 | |HGNC=24008 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000495210_5end | |association_with_transcript=0bp_to_ENST00000495210_5end | ||
|cluster_id=chr1:222817717..222817738,+ | |||
|description=CAGE_peak_3_at_MIA3_5end | |description=CAGE_peak_3_at_MIA3_5end | ||
|id=chr1:222817717..222817738,+ | |id=chr1:222817717..222817738,+ | ||
|ontology_enrichment_celltype=CL:0000738!1.22e-35!140;CL:0002031!2.43e-31!124;CL:0000037!1.95e-29!172;CL:0000566!1.95e-29!172;CL:0002087!1.98e-29!119;CL:0000557!8.35e-29!71;CL:0000766!2.04e-28!76;CL:0002032!2.34e-27!165;CL:0000837!2.34e-27!165;CL:0000839!2.88e-27!70;CL:0000988!6.15e-27!182;CL:0002009!1.48e-26!65;CL:0002194!1.49e-25!63;CL:0000576!1.49e-25!63;CL:0000040!1.49e-25!63;CL:0000559!1.49e-25!63;CL:0000763!1.13e-21!112;CL:0000049!1.13e-21!112;CL:0002057!1.05e-20!42;CL:0000860!1.21e-19!45;CL:0002320!8.10e-13!365;CL:0000134!1.47e-12!358;CL:0000219!2.58e-10!390;CL:0000048!5.08e-09!430;CL:0000723!7.10e-08!436;CL:0000034!1.37e-07!444 | |ontology_enrichment_celltype=CL:0000738!1.22e-35!140;CL:0002031!2.43e-31!124;CL:0000037!1.95e-29!172;CL:0000566!1.95e-29!172;CL:0002087!1.98e-29!119;CL:0000557!8.35e-29!71;CL:0000766!2.04e-28!76;CL:0002032!2.34e-27!165;CL:0000837!2.34e-27!165;CL:0000839!2.88e-27!70;CL:0000988!6.15e-27!182;CL:0002009!1.48e-26!65;CL:0002194!1.49e-25!63;CL:0000576!1.49e-25!63;CL:0000040!1.49e-25!63;CL:0000559!1.49e-25!63;CL:0000763!1.13e-21!112;CL:0000049!1.13e-21!112;CL:0002057!1.05e-20!42;CL:0000860!1.21e-19!45;CL:0002320!8.10e-13!365;CL:0000134!1.47e-12!358;CL:0000219!2.58e-10!390;CL:0000048!5.08e-09!430;CL:0000723!7.10e-08!436;CL:0000034!1.37e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.35e-19;39!CL:0000234;1.35e-19;39!CL:0000576;4.60e-19;48!CL:0000860;5.79e-19;33!CL:0002057;5.79e-19;33!CL:0000766;8.02e-17;69!CL:0002087;2.43e-10;104!CL:0000738;1.05e-09;136!CL:0000763;5.87e-08;100!CL:0000451;1.29e-07;10 | |ontology_enrichment_celltype_v019=CL:0000473;1.35e-19;39!CL:0000234;1.35e-19;39!CL:0000576;4.60e-19;48!CL:0000860;5.79e-19;33!CL:0002057;5.79e-19;33!CL:0000766;8.02e-17;69!CL:0002087;2.43e-10;104!CL:0000738;1.05e-09;136!CL:0000763;5.87e-08;100!CL:0000451;1.29e-07;10 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.60e-46,136;CL:0000766,1.84e-40,72;CL:0000557,6.50e-40,67;CL:0002031,1.83e-39,120;CL:0000839,1.41e-37,66;CL:0002087,3.67e-37,115;CL:0002009,5.19e-37,61;CL:0000037,3.54e-36,168;CL:0002194,1.10e-35,59;CL:0000576,1.10e-35,59;CL:0000040,1.10e-35,59;CL:0000559,1.10e-35,59;CL:0002032,1.47e-33,161;CL:0000837,1.47e-33,161;CL:0000988,2.27e-33,177;CL:0000473,1.07e-30,48;CL:0000234,1.07e-30,48;CL:0000763,2.13e-28,108;CL:0000049,2.13e-28,108;CL:0000860,1.82e-26,42;CL:0002057,1.82e-26,42;CL:0002320,6.74e-17,361;CL:0000134,2.60e-16,354;CL:0000219,3.65e-13,386;CL:0000048,1.93e-12,427;CL:0000034,1.49e-11,441;CL:0000723,1.61e-11,433;CL:0000451,4.66e-08,10 | |||
|ontology_enrichment_development_v019=CL:0002057;2.04e-18;42!CL:0000049;4.51e-08;108 | |ontology_enrichment_development_v019=CL:0002057;2.04e-18;42!CL:0000049;4.51e-08;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.35e-25!102;UBERON:0003061!1.35e-25!102;UBERON:0002193!4.37e-25!112;UBERON:0002371!2.16e-24!80;UBERON:0001474!8.04e-23!86;UBERON:0002405!3.67e-21!115;UBERON:0004765!9.14e-21!101;UBERON:0001434!9.14e-21!101;UBERON:0002384!1.87e-13!375;UBERON:0002204!1.64e-09!167 | |ontology_enrichment_uberon=UBERON:0002390!1.35e-25!102;UBERON:0003061!1.35e-25!102;UBERON:0002193!4.37e-25!112;UBERON:0002371!2.16e-24!80;UBERON:0001474!8.04e-23!86;UBERON:0002405!3.67e-21!115;UBERON:0004765!9.14e-21!101;UBERON:0001434!9.14e-21!101;UBERON:0002384!1.87e-13!375;UBERON:0002204!1.64e-09!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.58e-34,76;UBERON:0002390,1.76e-34,98;UBERON:0003061,1.76e-34,98;UBERON:0002193,2.31e-33,108;UBERON:0004765,3.94e-33,90;UBERON:0001474,5.41e-33,82;UBERON:0002405,7.66e-31,93;UBERON:0001434,6.80e-29,100;UBERON:0002384,2.45e-17,371;UBERON:0002204,4.00e-14,167;UBERON:0003081,2.36e-10,203 | |||
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| ||
|short_description=p3@MIA3 | |short_description=p3@MIA3 | ||
}} | }} |
Latest revision as of 20:17, 15 September 2015
Short description: | p3@MIA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIA3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000495210_5end |
EntrezGene: | MIA3 |
HGNC: | 24008 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.60e-46 | 136 |
myeloid leukocyte | 1.84e-40 | 72 |
granulocyte monocyte progenitor cell | 6.50e-40 | 67 |
hematopoietic lineage restricted progenitor cell | 1.83e-39 | 120 |
myeloid lineage restricted progenitor cell | 1.41e-37 | 66 |
nongranular leukocyte | 3.67e-37 | 115 |
macrophage dendritic cell progenitor | 5.19e-37 | 61 |
hematopoietic stem cell | 3.54e-36 | 168 |
monopoietic cell | 1.10e-35 | 59 |
monocyte | 1.10e-35 | 59 |
monoblast | 1.10e-35 | 59 |
promonocyte | 1.10e-35 | 59 |
hematopoietic oligopotent progenitor cell | 1.47e-33 | 161 |
hematopoietic multipotent progenitor cell | 1.47e-33 | 161 |
hematopoietic cell | 2.27e-33 | 177 |
defensive cell | 1.07e-30 | 48 |
phagocyte | 1.07e-30 | 48 |
myeloid cell | 2.13e-28 | 108 |
common myeloid progenitor | 2.13e-28 | 108 |
classical monocyte | 1.82e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.82e-26 | 42 |
connective tissue cell | 6.74e-17 | 361 |
mesenchymal cell | 2.60e-16 | 354 |
motile cell | 3.65e-13 | 386 |
multi fate stem cell | 1.93e-12 | 427 |
stem cell | 1.49e-11 | 441 |
somatic stem cell | 1.61e-11 | 433 |
dendritic cell | 4.66e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.58e-34 | 76 |
hematopoietic system | 1.76e-34 | 98 |
blood island | 1.76e-34 | 98 |
hemolymphoid system | 2.31e-33 | 108 |
skeletal element | 3.94e-33 | 90 |
bone element | 5.41e-33 | 82 |
immune system | 7.66e-31 | 93 |
skeletal system | 6.80e-29 | 100 |
connective tissue | 2.45e-17 | 371 |
musculoskeletal system | 4.00e-14 | 167 |
lateral plate mesoderm | 2.36e-10 | 203 |