FFCP PHASE1:Hg19::chr11:64000022..64000040,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:64000022..64000040,+ | |||
|description=CAGE_peak_at_chr11:64000022..64000040,+ | |description=CAGE_peak_at_chr11:64000022..64000040,+ | ||
|id=chr11:64000022..64000040,+ | |id=chr11:64000022..64000040,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000650;3.69e-07;2!CL:1000500;3.69e-07;2!CL:1000618;3.69e-07;2!CL:1001318;3.69e-07;2!CL:0002173;3.69e-07;2!CL:0002593;3.69e-07;2 | |ontology_enrichment_celltype_v019=CL:0000650;3.69e-07;2!CL:1000500;3.69e-07;2!CL:1000618;3.69e-07;2!CL:1001318;3.69e-07;2!CL:0002173;3.69e-07;2!CL:0002593;3.69e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002593,4.69e-07,2;CL:0000650,5.60e-07,2;CL:1000500,5.60e-07,2;CL:1000618,5.60e-07,2;CL:1001318,5.60e-07,2;CL:0002173,5.60e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.76e-13;1 | |ontology_enrichment_development_v019=UBERON:0005425;4.76e-13;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;4.76e-13;1!UBERON:0000941;4.76e-13;1!UBERON:0001785;4.76e-13;1!UBERON:0002464;4.76e-13;1!UBERON:0004904;4.76e-13;1!UBERON:0001021;4.76e-13;1!UBERON:0003714;3.69e-07;2!UBERON:0005162;3.69e-07;2!UBERON:0000122;3.69e-07;2!UBERON:0003567;3.69e-07;2!UBERON:0003838;3.69e-07;2!UBERON:0003586;3.69e-07;2!UBERON:0005169;3.69e-07;2!UBERON:0002321;3.69e-07;2!UBERON:0002456;3.69e-07;2!UBERON:0005215;3.69e-07;2!UBERON:0002303;3.69e-07;2!UBERON:0002319;3.69e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000029;4.76e-13;1!UBERON:0000941;4.76e-13;1!UBERON:0001785;4.76e-13;1!UBERON:0002464;4.76e-13;1!UBERON:0004904;4.76e-13;1!UBERON:0001021;4.76e-13;1!UBERON:0003714;3.69e-07;2!UBERON:0005162;3.69e-07;2!UBERON:0000122;3.69e-07;2!UBERON:0003567;3.69e-07;2!UBERON:0003838;3.69e-07;2!UBERON:0003586;3.69e-07;2!UBERON:0005169;3.69e-07;2!UBERON:0002321;3.69e-07;2!UBERON:0002456;3.69e-07;2!UBERON:0005215;3.69e-07;2!UBERON:0002303;3.69e-07;2!UBERON:0002319;3.69e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,2.06e-13,1;UBERON:0000941,2.62e-13,1;UBERON:0001785,2.62e-13,1;UBERON:0002464,2.62e-13,1;UBERON:0004904,2.62e-13,1;UBERON:0001021,2.62e-13,1;UBERON:0003902,2.62e-13,1;UBERON:0005425,2.62e-13,1;UBERON:0003714,2.74e-07,2;UBERON:0005162,2.74e-07,2;UBERON:0000122,2.74e-07,2;UBERON:0002456,4.69e-07,2;UBERON:0003567,5.60e-07,2;UBERON:0003838,5.60e-07,2;UBERON:0003586,5.60e-07,2;UBERON:0005169,5.60e-07,2;UBERON:0002321,5.60e-07,2;UBERON:0005215,5.60e-07,2;UBERON:0002303,5.60e-07,2;UBERON:0002319,5.60e-07,2 | |||
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| ||
|short_description=p@chr11:64000022..64000040,+ | |short_description=p@chr11:64000022..64000040,+ | ||
}} | }} |
Latest revision as of 00:07, 24 July 2015
Short description: | p@chr11:64000022..64000040, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:64000022..64000040, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 4.69e-07 | 2 |
mesangial cell | 5.60e-07 | 2 |
kidney interstitial cell | 5.60e-07 | 2 |
juxtaglomerular complex cell | 5.60e-07 | 2 |
renal interstitial pericyte | 5.60e-07 | 2 |
extraglomerular mesangial cell | 5.60e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymph node | 2.06e-13 | 1 |
cranial nerve II | 2.62e-13 | 1 |
cranial nerve | 2.62e-13 | 1 |
nerve trunk | 2.62e-13 | 1 |
nerve connecting eye with brain | 2.62e-13 | 1 |
nerve | 2.62e-13 | 1 |
retinal neural layer | 2.62e-13 | 1 |
presumptive neural retina | 2.62e-13 | 1 |
neural tissue | 2.74e-07 | 2 |
multi cell component structure | 2.74e-07 | 2 |
neuron projection bundle | 2.74e-07 | 2 |
internal thoracic artery | 4.69e-07 | 2 |
abdomen connective tissue | 5.60e-07 | 2 |
abdominal segment connective tissue | 5.60e-07 | 2 |
trunk connective tissue | 5.60e-07 | 2 |
interstitial tissue | 5.60e-07 | 2 |
extraglomerular mesangium | 5.60e-07 | 2 |
kidney interstitium | 5.60e-07 | 2 |
juxtaglomerular apparatus | 5.60e-07 | 2 |
mesangium | 5.60e-07 | 2 |