FFCP PHASE1:Hg19::chr1:241577071..241577081,+: Difference between revisions
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|id=chr1:241577071..241577081,+
|short_description=p@chr1:241577071..241577081,+
|description=CAGE_peak_at_chr1:241577071..241577081,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:241577071..241577081,+ | |||
|coexpression_cluster_id=C1853 | |||
|description=CAGE_peak_at_chr1:241577071..241577081,+ | |||
|id=chr1:241577071..241577081,+ | |||
|ontology_enrichment_celltype=CL:0000057!5.71e-24!75;CL:0002556!6.98e-18!6;CL:0002551!1.84e-17!6;CL:0002552!2.46e-14!5;CL:0002620!2.65e-10!23;CL:0000055!3.62e-10!180 | |||
|ontology_enrichment_celltype_v019=CL:0002552;8.55e-45;5!CL:0002556;1.71e-17;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,8.55e-45,5;CL:0002556,1.85e-17,6;CL:0000057,2.28e-08,76 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.66e-74;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001758!6.98e-18!6;UBERON:0003672!6.98e-18!6;UBERON:0003102!6.87e-13!95;UBERON:0004733!2.67e-12!12;UBERON:0002028!2.67e-12!12;UBERON:0007277!2.67e-12!12;UBERON:0002067!1.50e-11!9;UBERON:0004016!1.50e-11!9;UBERON:0010083!1.50e-11!9;UBERON:0004732!2.66e-11!13;UBERON:0000075!3.44e-11!13;UBERON:0005944!3.44e-11!13;UBERON:0004288!3.44e-11!13;UBERON:0003089!3.44e-11!13;UBERON:0000165!5.95e-11!28;UBERON:0000930!5.95e-11!28;UBERON:0003076!1.05e-09!15;UBERON:0003057!1.05e-09!15;UBERON:0003129!1.29e-09!11;UBERON:0001828!5.67e-09!8;UBERON:0002680!5.14e-08!9;UBERON:0001895!5.14e-08!9;UBERON:0010092!5.14e-08!9;UBERON:0002037!2.25e-07!6;UBERON:0006215!2.25e-07!6;UBERON:0002199!2.88e-07!45;UBERON:0002416!2.88e-07!45;UBERON:0001444!4.57e-07!48;UBERON:0002097!8.17e-07!40;UBERON:0000033!8.44e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;9.18e-38;6!UBERON:0001828;2.38e-28;8!UBERON:0002680;1.77e-25;9!UBERON:0001895;1.77e-25;9!UBERON:0000165;2.82e-22;28!UBERON:0004733;2.56e-19;12!UBERON:0002028;2.56e-19;12!UBERON:0004732;6.81e-18;13!UBERON:0003729;9.08e-18;13!UBERON:0001758;1.71e-17;6!UBERON:0003672;1.71e-17;6!UBERON:0003129;3.79e-15;7!UBERON:0000161;2.15e-12;19!UBERON:0000166;2.15e-12;19!UBERON:0000344;8.27e-12;20!UBERON:0001444;4.93e-11;48!UBERON:0000033;6.87e-11;50!UBERON:0011137;5.29e-10;11!UBERON:0010323;5.29e-10;11!UBERON:0000153;3.80e-09;54!UBERON:0007811;1.33e-08;52!UBERON:0001555;3.13e-07;54!UBERON:0000075;3.66e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,8.10e-38,6;UBERON:0006215,8.10e-38,6;UBERON:0001828,2.38e-28,8;UBERON:0002680,1.63e-25,9;UBERON:0001895,1.63e-25,9;UBERON:0010092,1.63e-25,9;UBERON:0000165,1.68e-21,29;UBERON:0000930,1.68e-21,29;UBERON:0004733,2.41e-19,12;UBERON:0002028,2.41e-19,12;UBERON:0007277,2.41e-19,12;UBERON:0004732,6.43e-18,13;UBERON:0003729,9.08e-18,13;UBERON:0001758,1.85e-17,6;UBERON:0003672,1.85e-17,6;UBERON:0003076,1.24e-15,15;UBERON:0003057,1.24e-15,15;UBERON:0003129,4.07e-15,7;UBERON:0001444,7.37e-13,49;UBERON:0000344,8.27e-12,20;UBERON:0000033,2.77e-11,56;UBERON:0000166,8.48e-11,22;UBERON:0000153,3.25e-10,62;UBERON:0007811,3.25e-10,62;UBERON:0010323,5.54e-10,11;UBERON:0004121,4.33e-09,171;UBERON:0000924,4.33e-09,171;UBERON:0006601,4.33e-09,171;UBERON:0011137,4.82e-08,14;UBERON:0000075,3.78e-07,16;UBERON:0000161,7.68e-07,36 | |||
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| ||
|short_description=p@chr1:241577071..241577081,+ | |||
}} | }} |
Latest revision as of 05:43, 28 July 2015
Short description: | p@chr1:241577071..241577081, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:241577071..241577081, + |
Coexpression cluster: | C1853_Fibroblast_cerebellum_Olfactory_basal_mesodermal_Keratocytes_Ewing |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 8.55e-45 | 5 |
fibroblast of periodontium | 1.85e-17 | 6 |
fibroblast | 2.28e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 8.10e-38 | 6 |
rhombic lip | 8.10e-38 | 6 |
gingiva | 2.38e-28 | 8 |
regional part of metencephalon | 1.63e-25 | 9 |
metencephalon | 1.63e-25 | 9 |
future metencephalon | 1.63e-25 | 9 |
mouth | 1.68e-21 | 29 |
stomodeum | 1.68e-21 | 29 |
segmental subdivision of hindbrain | 2.41e-19 | 12 |
hindbrain | 2.41e-19 | 12 |
presumptive hindbrain | 2.41e-19 | 12 |
segmental subdivision of nervous system | 6.43e-18 | 13 |
mouth mucosa | 9.08e-18 | 13 |
periodontium | 1.85e-17 | 6 |
dentition | 1.85e-17 | 6 |
posterior neural tube | 1.24e-15 | 15 |
chordal neural plate | 1.24e-15 | 15 |
skull | 4.07e-15 | 7 |
subdivision of head | 7.37e-13 | 49 |
mucosa | 8.27e-12 | 20 |
head | 2.77e-11 | 56 |
oral opening | 8.48e-11 | 22 |
anterior region of body | 3.25e-10 | 62 |
craniocervical region | 3.25e-10 | 62 |
cranial skeletal system | 5.54e-10 | 11 |
ectoderm-derived structure | 4.33e-09 | 171 |
ectoderm | 4.33e-09 | 171 |
presumptive ectoderm | 4.33e-09 | 171 |
axial skeletal system | 4.82e-08 | 14 |
subdivision of skeletal system | 3.78e-07 | 16 |
orifice | 7.68e-07 | 36 |