FFCP PHASE1:Hg19::chr18:21572789..21572809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125488 | |EntrezGene=125488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |HGNC=26595 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N584 | |UniProt=Q8N584 | ||
|association_with_transcript=52bp_to_ENST00000304621,NM_153211,uc002kuu.2_5end | |association_with_transcript=52bp_to_ENST00000304621,NM_153211,uc002kuu.2_5end | ||
|cluster_id=chr18:21572789..21572809,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_11_at_TTC39C_5end | |description=CAGE_peak_11_at_TTC39C_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000791!3.31e-29!18;CL:0000789!3.31e-29!18;CL:0002420!3.31e-29!18;CL:0002419!3.31e-29!18;CL:0000790!3.31e-29!18;CL:0000084!1.08e-21!25;CL:0000827!1.08e-21!25;CL:0000625!2.45e-20!11;CL:0000624!1.51e-12!6;CL:0000838!3.22e-12!52;CL:0000542!7.25e-12!53;CL:0000051!7.25e-12!53;CL:0002087!2.74e-11!119;CL:0000738!3.49e-10!140;CL:0002031!3.45e-08!124;CL:0000898!3.29e-07!3 | |ontology_enrichment_celltype=CL:0000791!3.31e-29!18;CL:0000789!3.31e-29!18;CL:0002420!3.31e-29!18;CL:0002419!3.31e-29!18;CL:0000790!3.31e-29!18;CL:0000084!1.08e-21!25;CL:0000827!1.08e-21!25;CL:0000625!2.45e-20!11;CL:0000624!1.51e-12!6;CL:0000838!3.22e-12!52;CL:0000542!7.25e-12!53;CL:0000051!7.25e-12!53;CL:0002087!2.74e-11!119;CL:0000738!3.49e-10!140;CL:0002031!3.45e-08!124;CL:0000898!3.29e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.14e-56;18!CL:0000789;4.14e-56;18!CL:0002419;4.14e-56;18!CL:0000084;2.02e-39;25!CL:0000625;3.57e-33;11!CL:0000624;1.22e-28;6!CL:0000898;1.84e-15;3!CL:0000542;1.45e-11;53!CL:0000815;7.21e-11;2!CL:0000792;7.21e-11;2!CL:0002677;7.21e-11;2!CL:0000623;5.86e-07;3 | |ontology_enrichment_celltype_v019=CL:0000791;4.14e-56;18!CL:0000789;4.14e-56;18!CL:0002419;4.14e-56;18!CL:0000084;2.02e-39;25!CL:0000625;3.57e-33;11!CL:0000624;1.22e-28;6!CL:0000898;1.84e-15;3!CL:0000542;1.45e-11;53!CL:0000815;7.21e-11;2!CL:0000792;7.21e-11;2!CL:0002677;7.21e-11;2!CL:0000623;5.86e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.38e-56,18;CL:0000789,3.38e-56,18;CL:0002420,3.38e-56,18;CL:0002419,3.38e-56,18;CL:0000790,3.38e-56,18;CL:0000084,1.75e-39,25;CL:0000827,1.75e-39,25;CL:0000625,2.55e-33,11;CL:0000624,1.44e-28,6;CL:0000838,2.28e-22,52;CL:0000542,7.16e-22,53;CL:0000051,7.16e-22,53;CL:0000898,1.93e-15,3;CL:0000815,7.77e-11,2;CL:0000792,7.77e-11,2;CL:0002677,7.77e-11,2;CL:0002087,4.59e-09,115;CL:0002031,1.98e-07,120;CL:0000738,4.43e-07,136;CL:0000623,4.53e-07,3;CL:0000825,4.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.14e-56;18!CL:0000051;1.45e-11;53!UBERON:0006215;8.79e-07;3 | |ontology_enrichment_development_v019=CL:0000790;4.14e-56;18!CL:0000051;1.45e-11;53!UBERON:0006215;8.79e-07;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!2.18e-15!9;UBERON:0007023!2.88e-10!115;UBERON:0001557!9.26e-10!19 | |ontology_enrichment_uberon=UBERON:0001737!2.18e-15!9;UBERON:0007023!2.88e-10!115;UBERON:0001557!9.26e-10!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001896;5.86e-07;3!UBERON:0005290;5.86e-07;3 | |ontology_enrichment_uberon_v019=UBERON:0001896;5.86e-07;3!UBERON:0005290;5.86e-07;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.28e-07,3;UBERON:0005290,5.28e-07,3;UBERON:0010096,5.28e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0,0,0,0,0,0,0,0.553995408531877,0.200544447470142,0.217010870715852,0,0.971680998056939,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14735632182133,3.93010762749165,2.2616164889946,3.00935691703221,3.2592226663359,6.15482147455153,1.94826728407911,1.78256731016278,17.3817485410154,18.1657793558569,26.8095825127365,1.40900451698243,1.95089021339817,0.164437904603676,0.276350017785848,0.289803085735052,0.444859689486181,0.535081656179426,0,0.226618685395132,6.51474839123266,8.24705869158312,13.6630633690532,3.18565414324097,3.90650072313851,3.8018081777935,1.50575119077773,2.68771883424279,2.49861453104692,3.55165878066025,3.28451198768419,2.82249440514625,0.534880391567015,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0.324547393654683,0.348259474598534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,0.674338760312407,0.482022059766964,1.21323370005633,0.653638332277218,1.66089433377768,1.75280700608214,0.784885860501384,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,2.56139988262505,1.94064817373566,0.77005821767849,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51505644408909,0.215714200818617,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,1.31205858279882,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0.507447609232169,0,0,1.19115887728894,1.64544909234478,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,1.65868889896837,0,0,0.32681539055697,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387025325156341,0.292357268344742,0.246346371159628,0.193978032976839,0,1.35588444468319,0,0,0,0,0,0.640358984218058,0,0,0,0,0,0,1.17847017308398,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,2.29363678276028,1.88579387612649,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0,0.0679697329768317,0,0.472775363535873,0,0.078493092850514,0,0,0,0,0,2.43020250200632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617393264863557,0,0,0,0,0,0.297046400327086,0,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,2.49202596153974,0.502055437748735,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 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| ||
|short_description=p11@TTC39C | |short_description=p11@TTC39C | ||
}} | }} |
Latest revision as of 00:25, 19 September 2015
Short description: | p11@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TTC39C_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 52bp_to_ENST00000304621, NM_153211, uc002kuu.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.38e-56 | 18 |
alpha-beta T cell | 3.38e-56 | 18 |
immature T cell | 3.38e-56 | 18 |
mature T cell | 3.38e-56 | 18 |
immature alpha-beta T cell | 3.38e-56 | 18 |
T cell | 1.75e-39 | 25 |
pro-T cell | 1.75e-39 | 25 |
CD8-positive, alpha-beta T cell | 2.55e-33 | 11 |
CD4-positive, alpha-beta T cell | 1.44e-28 | 6 |
lymphoid lineage restricted progenitor cell | 2.28e-22 | 52 |
lymphocyte | 7.16e-22 | 53 |
common lymphoid progenitor | 7.16e-22 | 53 |
naive T cell | 1.93e-15 | 3 |
regulatory T cell | 7.77e-11 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.77e-11 | 2 |
naive regulatory T cell | 7.77e-11 | 2 |
nongranular leukocyte | 4.59e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-07 | 120 |
leukocyte | 4.43e-07 | 136 |
natural killer cell | 4.53e-07 | 3 |
pro-NK cell | 4.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 5.28e-07 | 3 |
myelencephalon | 5.28e-07 | 3 |
future myelencephalon | 5.28e-07 | 3 |