FFCP PHASE1:Hg19::chr1:26380381..26380423,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr1:26380381..26380423,+
|short_description=p@chr1:26380381..26380423,+
|description=CAGE_peak_at_chr1:26380381..26380423,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:26380381..26380423,+ | |||
|coexpression_cluster_id=C410 | |||
|description=CAGE_peak_at_chr1:26380381..26380423,+ | |||
|id=chr1:26380381..26380423,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.61e-19!10;CL:0000541!1.61e-19!10;CL:0000147!1.87e-18!14;CL:0002274!2.91e-17!5;CL:0000457!2.91e-17!5;CL:0002191!2.91e-17!5;CL:0000097!2.91e-17!5;CL:0000831!2.91e-17!5;CL:0002028!2.91e-17!5;CL:0000163!1.17e-09!9;CL:0000710!1.80e-09!20;CL:0002567!2.84e-08!3;CL:0002566!4.69e-07!1;CL:0000075!7.36e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002566;9.48e-18;1!CL:0000148;2.07e-15;10!CL:0000147;3.41e-11;14!CL:0000710;5.22e-08;20!CL:0002567;8.86e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002566,1.03e-17,1;CL:0000148,2.02e-15,10;CL:0000541,2.02e-15,10;CL:0000147,3.36e-11,14;CL:0000710,5.16e-08,20;CL:0002567,9.64e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.44e-18;1!UBERON:0010226;3.44e-18;1 | |||
|ontology_enrichment_disease=DOID:114!1.36e-12!2;DOID:178!4.18e-07!1;DOID:326!4.18e-07!1;DOID:3978!4.18e-07!1;DOID:3394!4.18e-07!1;DOID:5844!4.18e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:114;1.17e-33;2!DOID:178;9.48e-18;1!DOID:326;9.48e-18;1!DOID:3978;9.48e-18;1!DOID:3394;9.48e-18;1!DOID:5844;9.48e-18;1!DOID:1287;2.19e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.07e-34,2;DOID:178,7.37e-18,1;DOID:326,7.37e-18,1;DOID:3978,7.37e-18,1;DOID:3394,7.37e-18,1;DOID:5844,7.37e-18,1;DOID:1287,1.45e-17,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004151;2.10e-23;3!UBERON:0002084;3.44e-18;1!UBERON:0002079;3.44e-18;1!UBERON:0002082;3.44e-18;1!UBERON:0002426;4.44e-18;1!UBERON:0003831;4.44e-18;1!UBERON:0003898;4.44e-18;1!UBERON:0004830;4.44e-18;1!UBERON:0003830;4.44e-18;1!UBERON:0005175;4.44e-18;1!UBERON:0001774;4.44e-18;1!UBERON:0001103;4.44e-18;1!UBERON:0002146;9.48e-18;1!UBERON:0005623;9.48e-18;1!UBERON:0007100;1.22e-16;25!UBERON:0001134;4.98e-10;16!UBERON:0002036;4.98e-10;16!UBERON:0002081;9.06e-10;2!UBERON:0005090;1.03e-09;2!UBERON:0001630;1.03e-09;2!UBERON:0000948;1.92e-07;22!UBERON:0001723;8.86e-07;3!UBERON:0003978;8.86e-07;3!UBERON:0000946;8.86e-07;3!UBERON:0001033;8.86e-07;3 | |||
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|short_description=p@chr1:26380381..26380423,+ | |||
}} | }} |
Latest revision as of 06:32, 28 July 2015
Short description: | p@chr1:26380381..26380423, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:26380381..26380423, + |
Coexpression cluster: | C410_skeletal_left_heart_penis_diaphragm_throat_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
dark melanocyte | 1.03e-17 | 1 |
melanocyte | 2.02e-15 | 10 |
melanoblast | 2.02e-15 | 10 |
pigment cell | 3.36e-11 | 14 |
neurecto-epithelial cell | 5.16e-08 | 20 |
light melanocyte | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.10e-23 | 3 |
heart left ventricle | 3.16e-18 | 1 |
cardiac ventricle | 3.16e-18 | 1 |
future cardiac ventricle | 3.16e-18 | 1 |
left cardiac atrium | 3.75e-18 | 1 |
chest muscle | 4.44e-18 | 1 |
respiratory system muscle | 4.44e-18 | 1 |
skeletal muscle of trunk | 4.44e-18 | 1 |
respiratory system skeletal muscle | 4.44e-18 | 1 |
thoracic segment muscle | 4.44e-18 | 1 |
chest organ | 4.44e-18 | 1 |
muscle of trunk | 4.44e-18 | 1 |
diaphragm | 4.44e-18 | 1 |
future diaphragm | 4.44e-18 | 1 |
pulmonary valve | 1.70e-17 | 1 |
semi-lunar valve | 1.70e-17 | 1 |
primary circulatory organ | 1.95e-15 | 27 |
cardiac atrium | 9.46e-10 | 2 |
future cardiac atrium | 9.46e-10 | 2 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
compound organ | 1.37e-08 | 68 |
heart | 7.77e-07 | 24 |
primitive heart tube | 7.77e-07 | 24 |
primary heart field | 7.77e-07 | 24 |
anterior lateral plate mesoderm | 7.77e-07 | 24 |
heart tube | 7.77e-07 | 24 |
heart primordium | 7.77e-07 | 24 |
cardiac mesoderm | 7.77e-07 | 24 |
cardiogenic plate | 7.77e-07 | 24 |
heart rudiment | 7.77e-07 | 24 |
tongue | 8.62e-07 | 3 |
gustatory system | 8.62e-07 | 3 |
future tongue | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.07e-34 | 2 |
vascular disease | 7.37e-18 | 1 |
ischemia | 7.37e-18 | 1 |
extrinsic cardiomyopathy | 7.37e-18 | 1 |
myocardial ischemia | 7.37e-18 | 1 |
myocardial infarction | 7.37e-18 | 1 |
cardiovascular system disease | 1.45e-17 | 4 |