FFCP PHASE1:Hg19::chr15:63340635..63340646,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7168 | |EntrezGene=7168 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12010 | |HGNC=12010 | ||
|TSSclassifier=strong | |||
|UniProt=D9YZV7,P09493 | |UniProt=D9YZV7,P09493 | ||
|association_with_transcript=0bp_to_NM_001018008,uc002alr.2,uc002als.2,uc002alt.2,uc010bgp.2,uc010uif.1,uc010uig.1_5end | |association_with_transcript=0bp_to_NM_001018008,uc002alr.2,uc002als.2,uc002alt.2,uc010bgp.2,uc010uif.1,uc010uig.1_5end | ||
|cluster_id=chr15:63340635..63340646,+ | |||
|description=CAGE_peak_13_at_TPM1_5end | |description=CAGE_peak_13_at_TPM1_5end | ||
|id=chr15:63340635..63340646,+ | |id=chr15:63340635..63340646,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.38e-07;29 | |ontology_enrichment_development_v019=UBERON:0008947;3.38e-07;29 | ||
|ontology_enrichment_disease=DOID:0050687!8.78e-09!143;DOID:305!2.98e-07!106 | |ontology_enrichment_disease=DOID:0050687!8.78e-09!143;DOID:305!2.98e-07!106 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:0050687,2.22e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.74e-20!115;UBERON:0001049!5.42e-16!57;UBERON:0005068!5.42e-16!57;UBERON:0006241!5.42e-16!57;UBERON:0007135!5.42e-16!57;UBERON:0002616!2.40e-15!59;UBERON:0001869!9.03e-15!32;UBERON:0002020!2.14e-14!34;UBERON:0003528!2.14e-14!34;UBERON:0001893!2.44e-14!34;UBERON:0003080!5.15e-14!42;UBERON:0002791!8.24e-14!33;UBERON:0000955!9.34e-14!69;UBERON:0006238!9.34e-14!69;UBERON:0001017!9.87e-14!82;UBERON:0005743!1.53e-13!86;UBERON:0002780!1.83e-13!41;UBERON:0001890!1.83e-13!41;UBERON:0006240!1.83e-13!41;UBERON:0000073!4.36e-13!94;UBERON:0001016!4.36e-13!94;UBERON:0002619!7.35e-13!22;UBERON:0001950!7.94e-12!20;UBERON:0000956!3.18e-11!25;UBERON:0000203!3.18e-11!25;UBERON:0003075!2.58e-10!86;UBERON:0007284!2.58e-10!86;UBERON:0002346!3.43e-10!90;UBERON:0000924!4.11e-09!173;UBERON:0006601!4.11e-09!173;UBERON:0004121!4.34e-09!169;UBERON:0000033!8.92e-09!123;UBERON:0000481!1.24e-08!347;UBERON:0003056!2.36e-08!61;UBERON:0000153!3.56e-08!129;UBERON:0007811!3.56e-08!129;UBERON:0001007!4.21e-08!155;UBERON:0001555!4.21e-08!155;UBERON:0007026!4.21e-08!155;UBERON:0000922!5.18e-08!612;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0002050!3.27e-07!605;UBERON:0005423!3.27e-07!605;UBERON:0000062!3.89e-07!511;UBERON:0000467!3.89e-07!625;UBERON:0000923!4.85e-07!604;UBERON:0005291!4.85e-07!604;UBERON:0006598!4.85e-07!604;UBERON:0002532!4.85e-07!604;UBERON:0004119!5.20e-07!169;UBERON:0000925!5.20e-07!169;UBERON:0006595!5.20e-07!169;UBERON:0008947!5.76e-07!38;UBERON:0003258!5.76e-07!38;UBERON:0000480!5.86e-07!626;UBERON:0000468!5.95e-07!659 | |ontology_enrichment_uberon=UBERON:0007023!7.74e-20!115;UBERON:0001049!5.42e-16!57;UBERON:0005068!5.42e-16!57;UBERON:0006241!5.42e-16!57;UBERON:0007135!5.42e-16!57;UBERON:0002616!2.40e-15!59;UBERON:0001869!9.03e-15!32;UBERON:0002020!2.14e-14!34;UBERON:0003528!2.14e-14!34;UBERON:0001893!2.44e-14!34;UBERON:0003080!5.15e-14!42;UBERON:0002791!8.24e-14!33;UBERON:0000955!9.34e-14!69;UBERON:0006238!9.34e-14!69;UBERON:0001017!9.87e-14!82;UBERON:0005743!1.53e-13!86;UBERON:0002780!1.83e-13!41;UBERON:0001890!1.83e-13!41;UBERON:0006240!1.83e-13!41;UBERON:0000073!4.36e-13!94;UBERON:0001016!4.36e-13!94;UBERON:0002619!7.35e-13!22;UBERON:0001950!7.94e-12!20;UBERON:0000956!3.18e-11!25;UBERON:0000203!3.18e-11!25;UBERON:0003075!2.58e-10!86;UBERON:0007284!2.58e-10!86;UBERON:0002346!3.43e-10!90;UBERON:0000924!4.11e-09!173;UBERON:0006601!4.11e-09!173;UBERON:0004121!4.34e-09!169;UBERON:0000033!8.92e-09!123;UBERON:0000481!1.24e-08!347;UBERON:0003056!2.36e-08!61;UBERON:0000153!3.56e-08!129;UBERON:0007811!3.56e-08!129;UBERON:0001007!4.21e-08!155;UBERON:0001555!4.21e-08!155;UBERON:0007026!4.21e-08!155;UBERON:0000922!5.18e-08!612;UBERON:0004921!1.06e-07!129;UBERON:0004185!1.06e-07!129;UBERON:0002050!3.27e-07!605;UBERON:0005423!3.27e-07!605;UBERON:0000062!3.89e-07!511;UBERON:0000467!3.89e-07!625;UBERON:0000923!4.85e-07!604;UBERON:0005291!4.85e-07!604;UBERON:0006598!4.85e-07!604;UBERON:0002532!4.85e-07!604;UBERON:0004119!5.20e-07!169;UBERON:0000925!5.20e-07!169;UBERON:0006595!5.20e-07!169;UBERON:0008947!5.76e-07!38;UBERON:0003258!5.76e-07!38;UBERON:0000480!5.86e-07!626;UBERON:0000468!5.95e-07!659 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.01e-24;22!UBERON:0001869;8.81e-23;32!UBERON:0001950;5.40e-22;20!UBERON:0002791;3.29e-21;32!UBERON:0000956;8.86e-21;25!UBERON:0000203;8.86e-21;25!UBERON:0003528;5.32e-20;34!UBERON:0002020;5.32e-20;34!UBERON:0001893;6.18e-20;34!UBERON:0002780;1.84e-14;41!UBERON:0001890;1.84e-14;41!UBERON:0000073;8.23e-12;53!UBERON:0002616;8.23e-12;53!UBERON:0000955;1.91e-08;68!UBERON:0000349;2.77e-08;5!UBERON:0002021;3.47e-08;5!UBERON:0000072;5.28e-08;37!UBERON:0001017;8.81e-08;75!UBERON:0001872;1.89e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.01e-24;22!UBERON:0001869;8.81e-23;32!UBERON:0001950;5.40e-22;20!UBERON:0002791;3.29e-21;32!UBERON:0000956;8.86e-21;25!UBERON:0000203;8.86e-21;25!UBERON:0003528;5.32e-20;34!UBERON:0002020;5.32e-20;34!UBERON:0001893;6.18e-20;34!UBERON:0002780;1.84e-14;41!UBERON:0001890;1.84e-14;41!UBERON:0000073;8.23e-12;53!UBERON:0002616;8.23e-12;53!UBERON:0000955;1.91e-08;68!UBERON:0000349;2.77e-08;5!UBERON:0002021;3.47e-08;5!UBERON:0000072;5.28e-08;37!UBERON:0001017;8.81e-08;75!UBERON:0001872;1.89e-07;5 | ||
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|phase1_expression=0,0.214100523890983,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0.783556884599516,0.245733936501509,0,0.218441372130172,0,0.495065411840187,0,0,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0,0,0.410623275218653,0.376627918784408,0.305653622991805,0.164201178899891,0.0787107813136792,0,0,0,0.919421224478927,1.204823675113,0,0,0,0.880801318004542,0.553995408531877,0,0.217010870715852,0.223915474239924,0,0.515151135268373,0,0,0.485168122375632,0,0,0.309706370895104,0,0,0,0,0,0,0.376484679085209,0,0,0,0,0,0,0,0,0,0.56738522469114,0,0,1.0429658368404,0,0.605399502633369,0,0,0.422510572623884,0.212604299965044,0.209658645508376,0,0,0.16072558669708,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,1.32171328579026,0,0.526768169550154,0.393419540227666,0,0.205601498999509,0.501559486172034,0.32592226663359,0,0,0.111410456885174,0,0,0,0.128091319725675,0,0,0,0.289803085735052,0.444859689486181,0.267540828089713,0,0.113309342697566,0,0,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0.670700859703636,0.12786256184353,0,0.50133791063589,0,0,0,0.189069634328136,0,0.175669571386252,0.72038491523742,0,0.741568885568859,0.324547393654683,0.696518949197069,0.398873881556595,0.238490624305342,0,0,0.79504962946682,0,0,0,0.419499436209906,0.550236083880135,0,0.258416759169329,1.42306505074684,0,0.805658634218294,0.760272105718513,0,0.367663080345869,0,0.357198913136319,0.898117490504679,0.900891843866578,0,0,0.183201743930407,0,0,0.436094052142534,0.993943903390637,0,0.132409180813219,0,1.41867352879343,0,1.06748995729705,0.49333509683432,0.311211035399766,0.134710672069688,0.980771418680752,0.302714855289863,0.576175924479999,0,0.936480230490962,0.570471821544449,0.597794722207204,0.704606991862589,0.323745888736263,0.140450806702248,0.816616685019573,0.122834317311768,0.723280468230358,0,0,0.910161361938026,0,0.336672227908132,0.750711119231785,0.277064115484183,0,0.30648779579902,0,0.113432183160021,0,0,0,0,0.721367704669072,0,0.18611685633159,0,0.0974370051611986,0,0.276149695926898,0.323292113637624,0,0.403008392910561,0.339121184620975,0.57978255948989,0.272746120590835,0.573609190778008,0.487894824518382,0.397589304964456,0.232387885739037,0.414644220061482,1.00928340350251,0,0,0,0,0.928735856063958,2.16563844500876,0.946454400318751,1.01150814046861,1.92808823906786,1.54411561825352,1.52515610864684,0.237270619111097,1.07865046528132,1.56977172100277,1.15424147083917,0.738155454624648,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0,0.171567810298526,0.548751427043128,0,1.40740561376283,1.01847289674383,0,0,0,0.231860809950154,1.40890433082986,0.144366447761074,0.462985512576611,0.570762456703795,0.790204397959275,0,0.738651018262192,0,0.297262324577456,0,0,0.283550194484773,0.358234090811393,0.871901815541886,0,1.97065295158377,0.528290604079356,0.207328115540772,0.144119953416961,0.12624243342638,0.698476837213859,0.381988425558278,2.34434894420094,0,0.411309970813294,0,0,0.112131084345361,0,0.2933531432838,0.258543431515556,0,0,0,0,0,0,0.266422179016099,1.00084595560703,0,0,0,1.06617584622764,0,0.301439377059586,0,0.199945982364114,0,0.502257091432126,0,0,0,1.42636905040718,0.434343920002738,0.410952645100767,0,0.112085143993527,0.394061520403854,0,0,0.254094624222463,1.30139853857622,0,1.17261385734044,0,0,0,0,0.736148950314839,0.500170521059677,0.271265023699736,0,0,0,0.35142424497814,0,0,0,0,0,0.260650843404249,0.391602314925481,0.686286847621712,0.413536052245775,0,0.213455115606889,0,0,0.30239029332968,0,0,0,0.256278298511402,0,0.160853921143607,0,0.616838775210622,0.710246901252508,0.328508624055237,0,0.581051892299796,0.120859449591622,0.200506470303285,1.10497186723076,0.574072240823034,0.364182336013434,0.262248829918848,0,0.0770153371044148,0,0,0.316654886678627,0,0.510281115829547,0.647747748306418,0,0,0,0,0,0,2.41185864310528,2.0914836081992,0.769350375349168,0,0.325378394664303,0.515205058238611,0.366277859273374,0.165018999841176,0,1.30012049207304,1.6068392984416,0.290012154876366,0.462145851343933,0.614014698904518,0,1.07420244868274,1.0151168573996,0.426133137080504,0.445160178233687,0.330569830721956,0.384380134730212,0.255225424989168,0.6069466851333,0.464845549297286,0,1.3940745403212,0,0,0,0,0,0.372158369359667,0.632758849437452,0.38126038784765,0.255897791311334,1.28381696410176,0.318203247925937,0,0.899362287916574,0.54907405947211,0.942499218765491,0.202182481573316,0,0,1.46290121726877,0.243713489631284,0,0.409499734223957,1.69686518344455,0,0.551365343546124,0,0.438450885253763,1.73632660280006,1.9676842561399,0,0,0,0.717056761020258,0.0982490410131212,0,0.354761064070598,0,0.329294892959902,0,0.349934720244983,0.288666338176536,0.670302275535787,1.08890984861323,0.188287601553558,0,0,0.886860307073351,0.229723400206959,1.01489521846434,0.764637207142375,0,0.238231775457789,0.411362273086194,0,1.08006287447623,0.79312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| ||
|short_description=p13@TPM1 | |short_description=p13@TPM1 | ||
}} | }} |
Latest revision as of 11:32, 18 September 2015
Short description: | p13@TPM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_TPM1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001018008, uc002alr.2, uc002als.2, uc002alt.2, uc010bgp.2, uc010uif.1, uc010uig.1_5end |
EntrezGene: | TPM1 |
HGNC: | 12010 |
UniProt: | D9YZV7P09493 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type cancer | 2.22e-08 | 143 |