FFCP PHASE1:Hg19::chr20:1448358..1448372,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:1448358..1448372,-
|short_description=p5@NSFL1C
|description=CAGE_peak_5_at_NSFL1C_5end
|association_with_transcript=-21bp_to_ENST00000216879,NM_001206736...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55968 | |EntrezGene=55968 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15912 | |HGNC=15912 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNZ2,Q53FE8 | |UniProt=Q9UNZ2,Q53FE8 | ||
|association_with_transcript=-21bp_to_ENST00000216879,NM_001206736,NM_016143,NM_018839,NR_038164_5end | |||
|cluster_id=chr20:1448358..1448372,- | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_5_at_NSFL1C_5end | |||
|id=chr20:1448358..1448372,- | |||
|ontology_enrichment_celltype=CL:0000763!1.48e-17!112;CL:0000049!1.48e-17!112;CL:0000037!6.10e-14!172;CL:0000566!6.10e-14!172;CL:0002032!7.51e-14!165;CL:0000837!7.51e-14!165;CL:0000988!1.23e-12!182;CL:0000767!3.68e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.13e-26;5!CL:0000037;6.44e-16;1!CL:0001024;6.44e-16;1!CL:0002032;2.21e-15;1!CL:0000557;2.21e-15;1!CL:0000163;3.96e-15;9!CL:0002535;1.55e-08;2!CL:0001014;2.40e-08;2!CL:0001016;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.08e-26,5;CL:0002028,1.08e-26,5;CL:0001024,6.44e-16,1;CL:0000163,3.87e-15,9;CL:0000557,9.24e-10,67;CL:0000763,1.16e-09,108;CL:0000049,1.16e-09,108;CL:0000037,5.14e-09,168;CL:0002535,1.61e-08,2;CL:0000988,1.70e-08,177;CL:0001014,2.00e-08,2;CL:0001016,2.00e-08,2;CL:0002032,1.05e-07,161;CL:0000837,1.05e-07,161;CL:0000766,9.79e-07,72 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!1.23e-18!31;DOID:1240!5.84e-14!39;DOID:2531!4.37e-11!51;DOID:0060083!4.37e-11!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0006955;1.55e-08;2!UBERON:0004801;1.55e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.68e-11,76;UBERON:0001474,2.67e-10,82;UBERON:0004765,2.49e-09,90;UBERON:0002405,5.23e-09,93;UBERON:0006955,1.61e-08,2;UBERON:0004801,1.61e-08,2;UBERON:0002390,1.63e-08,98;UBERON:0003061,1.63e-08,98;UBERON:0001434,2.49e-08,100;UBERON:0002193,1.16e-07,108 | |||
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| ||
|short_description=p5@NSFL1C | |||
}} | }} |
Latest revision as of 05:07, 20 September 2015
Short description: | p5@NSFL1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_NSFL1C_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -21bp_to_ENST00000216879, NM_001206736, NM_016143, NM_018839, NR_038164_5end |
EntrezGene: | NSFL1C |
HGNC: | 15912 |
UniProt: | Q9UNZ2Q53FE8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.08e-26 | 5 |
basophil mast progenitor cell | 1.08e-26 | 5 |
CD34-positive, CD38-negative hematopoietic stem cell | 6.44e-16 | 1 |
endocrine cell | 3.87e-15 | 9 |
granulocyte monocyte progenitor cell | 9.24e-10 | 67 |
myeloid cell | 1.16e-09 | 108 |
common myeloid progenitor | 1.16e-09 | 108 |
hematopoietic stem cell | 5.14e-09 | 168 |
epithelial cell of cervix | 1.61e-08 | 2 |
hematopoietic cell | 1.70e-08 | 177 |
CD1a-positive Langerhans cell | 2.00e-08 | 2 |
immature CD1a-positive Langerhans cell | 2.00e-08 | 2 |
hematopoietic oligopotent progenitor cell | 1.05e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.05e-07 | 161 |
myeloid leukocyte | 9.79e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.68e-11 | 76 |
bone element | 2.67e-10 | 82 |
skeletal element | 2.49e-09 | 90 |
immune system | 5.23e-09 | 93 |
uterine epithelium | 1.61e-08 | 2 |
cervix epithelium | 1.61e-08 | 2 |
hematopoietic system | 1.63e-08 | 98 |
blood island | 1.63e-08 | 98 |
skeletal system | 2.49e-08 | 100 |
hemolymphoid system | 1.16e-07 | 108 |