FFCP PHASE1:Hg19::chr12:9800816..9800834,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=374443 | |EntrezGene=374443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=118bp_to_uc009zgr.1_5end | |association_with_transcript=118bp_to_uc009zgr.1_5end | ||
|cluster_id=chr12:9800816..9800834,+ | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_11_at_LOC374443_5end | |description=CAGE_peak_11_at_LOC374443_5end | ||
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|ontology_enrichment_celltype=CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0000988!4.30e-24!182;CL:0000542!1.38e-22!53;CL:0000051!1.38e-22!53;CL:0000838!6.57e-22!52;CL:0002032!1.04e-21!165;CL:0000837!1.04e-21!165;CL:0000738!1.12e-20!140;CL:0002087!4.48e-20!119;CL:0000791!3.37e-18!18;CL:0000789!3.37e-18!18;CL:0002420!3.37e-18!18;CL:0002419!3.37e-18!18;CL:0000790!3.37e-18!18;CL:0002031!1.20e-16!124;CL:0000084!2.06e-16!25;CL:0000827!2.06e-16!25;CL:0000625!9.87e-12!11;CL:0000624!1.98e-07!6;CL:0002393!6.46e-07!9;CL:0002397!6.46e-07!9 | |ontology_enrichment_celltype=CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0000988!4.30e-24!182;CL:0000542!1.38e-22!53;CL:0000051!1.38e-22!53;CL:0000838!6.57e-22!52;CL:0002032!1.04e-21!165;CL:0000837!1.04e-21!165;CL:0000738!1.12e-20!140;CL:0002087!4.48e-20!119;CL:0000791!3.37e-18!18;CL:0000789!3.37e-18!18;CL:0002420!3.37e-18!18;CL:0002419!3.37e-18!18;CL:0000790!3.37e-18!18;CL:0002031!1.20e-16!124;CL:0000084!2.06e-16!25;CL:0000827!2.06e-16!25;CL:0000625!9.87e-12!11;CL:0000624!1.98e-07!6;CL:0002393!6.46e-07!9;CL:0002397!6.46e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.53e-46;18!CL:0000789;4.53e-46;18!CL:0002419;4.53e-46;18!CL:0000084;7.41e-32;25!CL:0000625;9.55e-32;11!CL:0000624;7.14e-19;6!CL:0000542;3.39e-16;53!CL:0000898;1.06e-10;3!CL:0000226;2.28e-09;3!CL:0000842;2.28e-09;3!CL:0000815;9.64e-08;2!CL:0000792;9.64e-08;2!CL:0002677;9.64e-08;2 | |ontology_enrichment_celltype_v019=CL:0000791;4.53e-46;18!CL:0000789;4.53e-46;18!CL:0002419;4.53e-46;18!CL:0000084;7.41e-32;25!CL:0000625;9.55e-32;11!CL:0000624;7.14e-19;6!CL:0000542;3.39e-16;53!CL:0000898;1.06e-10;3!CL:0000226;2.28e-09;3!CL:0000842;2.28e-09;3!CL:0000815;9.64e-08;2!CL:0000792;9.64e-08;2!CL:0002677;9.64e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.34e-46,18;CL:0000789,1.34e-46,18;CL:0002420,1.34e-46,18;CL:0002419,1.34e-46,18;CL:0000790,1.34e-46,18;CL:0000084,3.14e-32,25;CL:0000827,3.14e-32,25;CL:0000625,4.80e-32,11;CL:0000838,1.67e-27,52;CL:0000542,7.37e-27,53;CL:0000051,7.37e-27,53;CL:0000624,3.90e-19,6;CL:0002087,2.19e-15,115;CL:0000738,6.16e-14,136;CL:0000037,1.74e-13,168;CL:0000988,2.59e-13,177;CL:0002032,2.01e-11,161;CL:0000837,2.01e-11,161;CL:0002031,4.74e-11,120;CL:0000898,9.96e-11,3;CL:0000226,1.52e-09,3;CL:0000842,1.52e-09,3;CL:0000815,1.02e-07,2;CL:0000792,1.02e-07,2;CL:0002677,1.02e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;4.53e-46;18!CL:0000051;3.39e-16;53 | |ontology_enrichment_development_v019=CL:0000790;4.53e-46;18!CL:0000051;3.39e-16;53 | ||
|ontology_enrichment_disease=DOID:2531!8.37e-07!51;DOID:0060083!8.37e-07!51 | |ontology_enrichment_disease=DOID:2531!8.37e-07!51;DOID:0060083!8.37e-07!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.34e-11!15;UBERON:0000179!1.34e-11!15;UBERON:0000463!1.34e-11!15;UBERON:0002390!6.12e-10!102;UBERON:0003061!6.12e-10!102;UBERON:0002193!6.19e-09!112;UBERON:0004177!9.11e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!1.34e-11!15;UBERON:0000179!1.34e-11!15;UBERON:0000463!1.34e-11!15;UBERON:0002390!6.12e-10!102;UBERON:0003061!6.12e-10!102;UBERON:0002193!6.19e-09!112;UBERON:0004177!9.11e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.29e-17;15!UBERON:0000179;3.29e-17;15!UBERON:0000463;3.29e-17;15!UBERON:0002390;3.52e-11;32!UBERON:0002193;5.20e-07;42!UBERON:0002370;8.46e-07;2!UBERON:0005058;8.46e-07;2!UBERON:0009113;8.46e-07;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.29e-17;15!UBERON:0000179;3.29e-17;15!UBERON:0000463;3.29e-17;15!UBERON:0002390;3.52e-11;32!UBERON:0002193;5.20e-07;42!UBERON:0002370;8.46e-07;2!UBERON:0005058;8.46e-07;2!UBERON:0009113;8.46e-07;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.78e-17,15;UBERON:0000179,1.78e-17,15;UBERON:0000463,1.78e-17,15;UBERON:0002370,1.57e-07,4;UBERON:0005058,1.57e-07,4;UBERON:0009113,1.57e-07,4;UBERON:0003295,1.57e-07,4;UBERON:0005562,1.57e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,1.15148819429164,0.154816123316076,0,0,0.369754010166788,0.154934401160603,0.710846162437108,0.293600439334847,1.10799081706375,1.20326668482085,0.217010870715852,0.223915474239924,1.29557466407592,0.257575567634187,0.436194716338694,0,0,0.464858073811369,0,0,0.575384784644301,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.199463657621632,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0.368277635987565,0,0.633765858935825,0.425208599930087,0.628975936525128,0,0.150176892841506,0,0.285012743741249,0.99458338599545,0.365328307529268,0,1.09227722252426,0,1.70692089026603,2.00197993518006,1.14950487990897,0.661044872784862,0.954053754535364,1.1384259382189,0.587237189370939,0,0,0,1.05353633910031,4.13090517239049,1.96505381374582,3.90642848099067,2.50779743086017,9.12582346574053,7.101717086021,7.79306913631645,2.78526142212934,4.12448270464772,7.3106185212595,4.60366568400527,1.92136979588513,1.30059347559878,2.13769275984779,3.03985019564433,4.34704628602579,7.41432815810302,7.75868401460168,8.36284190439814,2.03956816855619,4.98186641682498,3.77990190030893,4.04831507231205,3.50421955756506,3.25541726928209,2.85135613334512,3.16207750063323,4.35154477925022,6.24653632761729,4.02521328474829,2.46338399076314,1.81446068902259,1.33720097891754,1.44824403882799,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.443458794925128,0,0.261958150995425,0,0,0,0,0.26591592103773,0,0,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297262324577456,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.414656231081544,0,0.12624243342638,0.190493682876507,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0,0.258543431515556,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672510863961164,2.56139988262505,0.862510299438069,2.05348858047597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0,0,0,1.44737618286021,3.23571301227925,1.60091336705167,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0.137836572484531,0.107420244868274,0,0,0,0.330569830721956,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0.0962221127255121,0,1.08890984861323,0.188287601553558,0,0,0,0,1.52234282769651,0,0.569647187174163,1.42939065274673,2.05681136543097,1.94541993357815,1.08006287447623,0.79312517629427,0,0,0,0.743212700502875,0.28853842595289,0.213425530045242,0,0.59873811429845,0.766021480529467,0.635020748171649,0,0,0,0.156679895773023,0,0.338583555603207,1.1241165257259,0.605399121573143,0.425846237690326,2.40453741329035,0,0,0,0.586164286206121,0,0,0.270455678475983,0.33307196799782,0,0,0,0,0.780103689942349,0,0.23874448473769,0,0,0,0.140669416410513,0.445234820091624,0.16480387422676,0,0,0.552567831062295,0,0,0.123084805461069,0,0.0898683511473268,0,2.04628948090749,0.394573622547734,2.3948309234694,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.219385397153973,0.10893846351899,0,0.307801034015188,0.113942055847001,0,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.476809736941136,0,0,0.282706142867882,0,0,0,0,0.889563386041866,0.741383633679017,1.56632924258183,0.067401132980677,0,0.234264445725339,0.91227394607833,0,0,0.394584402849391,1.20990716048664,0.30607276163049,0.126373159256976,0.901940516486955,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0,0.137041924646751,0,0.126621591911757,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0.101998217636322,0,0,0,1.27746588066972,0,0.788662062837943,0,0,0,0,0,0,0.53746777989381,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.262272940674991,0.211200673038813,0,0.383830394638891,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,1.48849806543585,0,0.365377795142688,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0.570930667089935,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0.779441235357554,0,0,0,0.245772908753719,0,0,0.320075189082423,0.51664493898244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| ||
|short_description=p11@LOC374443 | |short_description=p11@LOC374443 | ||
}} | }} |
Latest revision as of 05:19, 16 September 2015
Short description: | p11@LOC374443 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_LOC374443_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 118bp_to_uc009zgr.1_5end |
EntrezGene: | LOC374443 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.34e-46 | 18 |
alpha-beta T cell | 1.34e-46 | 18 |
immature T cell | 1.34e-46 | 18 |
mature T cell | 1.34e-46 | 18 |
immature alpha-beta T cell | 1.34e-46 | 18 |
T cell | 3.14e-32 | 25 |
pro-T cell | 3.14e-32 | 25 |
CD8-positive, alpha-beta T cell | 4.80e-32 | 11 |
lymphoid lineage restricted progenitor cell | 1.67e-27 | 52 |
lymphocyte | 7.37e-27 | 53 |
common lymphoid progenitor | 7.37e-27 | 53 |
CD4-positive, alpha-beta T cell | 3.90e-19 | 6 |
nongranular leukocyte | 2.19e-15 | 115 |
leukocyte | 6.16e-14 | 136 |
hematopoietic stem cell | 1.74e-13 | 168 |
hematopoietic cell | 2.59e-13 | 177 |
hematopoietic oligopotent progenitor cell | 2.01e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-11 | 161 |
hematopoietic lineage restricted progenitor cell | 4.74e-11 | 120 |
naive T cell | 9.96e-11 | 3 |
single nucleate cell | 1.52e-09 | 3 |
mononuclear cell | 1.52e-09 | 3 |
regulatory T cell | 1.02e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.02e-07 | 2 |
naive regulatory T cell | 1.02e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.78e-17 | 15 |
haemolymphatic fluid | 1.78e-17 | 15 |
organism substance | 1.78e-17 | 15 |
thymus | 1.57e-07 | 4 |
hemolymphoid system gland | 1.57e-07 | 4 |
thymic region | 1.57e-07 | 4 |
pharyngeal gland | 1.57e-07 | 4 |
thymus primordium | 1.57e-07 | 4 |