FFCP PHASE1:Hg19::chr12:120755326..120755340,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:120755326..120755340,- | |||
|description=CAGE_peak_at_chr12:120755326..120755340,- | |description=CAGE_peak_at_chr12:120755326..120755340,- | ||
|id=chr12:120755326..120755340,- | |id=chr12:120755326..120755340,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000623;7.62e-20;3!CL:0000784;8.05e-19;3!CL:0000791;7.23e-12;18!CL:0000789;7.23e-12;18!CL:0002419;7.23e-12;18!CL:0000624;9.38e-10;6!CL:0000767;1.41e-09;3!CL:0000084;2.19e-08;25!CL:0000037;1.21e-07;1!CL:0001024;1.21e-07;1!CL:0000167;2.74e-07;1!CL:0000164;2.74e-07;1!CL:0000502;2.74e-07;1!CL:0000172;2.74e-07;1!CL:0000173;2.74e-07;1 | |ontology_enrichment_celltype_v019=CL:0000623;7.62e-20;3!CL:0000784;8.05e-19;3!CL:0000791;7.23e-12;18!CL:0000789;7.23e-12;18!CL:0002419;7.23e-12;18!CL:0000624;9.38e-10;6!CL:0000767;1.41e-09;3!CL:0000084;2.19e-08;25!CL:0000037;1.21e-07;1!CL:0001024;1.21e-07;1!CL:0000167;2.74e-07;1!CL:0000164;2.74e-07;1!CL:0000502;2.74e-07;1!CL:0000172;2.74e-07;1!CL:0000173;2.74e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000623,6.97e-20,3;CL:0000825,6.97e-20,3;CL:0000784,8.34e-19,3;CL:0000791,4.66e-12,18;CL:0000789,4.66e-12,18;CL:0002420,4.66e-12,18;CL:0002419,4.66e-12,18;CL:0000790,4.66e-12,18;CL:0000624,6.64e-10,6;CL:0000767,1.67e-09,3;CL:0000084,1.61e-08,25;CL:0000827,1.61e-08,25;CL:0000838,2.38e-08,52;CL:0000542,3.65e-08,53;CL:0000051,3.65e-08,53;CL:0001024,1.42e-07,1;CL:0000167,3.20e-07,1;CL:0000164,3.20e-07,1;CL:0000502,3.20e-07,1;CL:0000172,3.20e-07,1;CL:0000173,3.20e-07,1;CL:0002351,3.20e-07,1;CL:0000738,3.84e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000790;7.23e-12;18!CL:0002351;2.74e-07;1 | |ontology_enrichment_development_v019=CL:0000790;7.23e-12;18!CL:0002351;2.74e-07;1 | ||
|ontology_enrichment_disease=DOID:0050687!1.30e-07!143;DOID:162!9.11e-07!235;DOID:305!9.92e-07!106 | |ontology_enrichment_disease=DOID:0050687!1.30e-07!143;DOID:162!9.11e-07!235;DOID:305!9.92e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:5093;2.66e-07;4!DOID:1612;2.66e-07;4!DOID:4430;2.74e-07;1!DOID:5409;7.05e-07;4 | |ontology_enrichment_disease_v019=DOID:5093;2.66e-07;4!DOID:1612;2.66e-07;4!DOID:4430;2.74e-07;1!DOID:5409;7.05e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,2.66e-07,4;DOID:1612,2.66e-07,4;DOID:4430,3.20e-07,1;DOID:5409,5.89e-07,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001874;2.74e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0001874;2.74e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001874,3.84e-07,1 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.14691421479123,3.0706351847777,0.464448369948228,0,0.30120591877825,0.739508020333575,0.0774672005803016,0,2.05520307534393,0,1.00272223735071,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0.645484683583826,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0.622822248995575,0,0,0.434377689410233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853460445133014,0,0.574752439954483,0,0.954053754535364,0,0,0,0,2.80254281490768,0.790152254325231,1.57367816091066,0.786021525498329,3.90642848099067,0.167186495390678,1.30368906653436,0,0,0.445641827540694,0.294605907474837,0.664601683750863,0.541607727530031,0.384273959177026,0.130059347559878,0.493313713811028,0.276350017785848,0,1.33457906845854,0.802622484269139,0,0.339928028092699,0.766440987203842,0,1.26509846009751,0.318565414324097,0,0,0.150575119077773,0.383959833463255,0,0.473554504088034,0,2.82249440514625,4.54648332831962,1.88271725047639,0,0,0,0,0,0.144846518960824,0.795285947051099,1.94653948121054,0,0,0.175669571386252,0,0,0,0,0,0.132957960518865,2.14641561874808,1.14398982156026,1.48583000531826,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0.662045904066094,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0.169560592310488,0,0,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,3.1608175918371,2.57545848628462,0,0,0.148631162288728,0,0,0,0,0,0,0.985326475791887,0,0.207328115540772,0.720599767084807,0.88369703398466,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0.112085143993527,3.15249216323084,2.58753089831421,3.46526197955321,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.0868836144680828,0.391602314925481,0,0.620304078368662,0.431428401637234,0.426910231213777,0,0,0.30239029332968,0.248107807818777,0.153461973288062,0,0,0,0.321707842287215,0,0,0,0,0,0,0.241718899183244,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0,0.214840489736547,0,0,0.0890320356467374,0,0.192190067365106,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0.551365343546124,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0.185803175125719,0.28853842595289,0.213425530045242,0,0.199579371432817,0,0.635020748171649,0,0.561594356226918,0.228234679033192,0.156679895773023,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0.270455678475983,0,0,0,0,0.242721043499027,0.111443384277478,0,0.47748896947538,0,0,0.994147647766298,0.422008249231538,0.333926115068718,0.16480387422676,0.211125408127993,0,0,0,0,0.123084805461069,0,0.0898683511473268,0.358042349351218,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.61221999997337,0,0.341380344856499,0.254253650292766,0.236387681767936,0.689486746482929,0,0.173624994933292,0,0.361789315876224,0,0.110579259931225,0,0,0.871507708151921,0,0.0769502585037971,0.113942055847001,0.46112780877612,0.179515288819544,0.108647371922008,0.31900115973192,0,0,0,0,0.166211681900156,0.225595660617181,0.19606253431774,0,0,0,0,0,0.141353071433941,0.865554558968364,0,0,0,1.48260564340311,0.123563938946503,0.104421949505455,0.067401132980677,0,0,0.547364367646998,0.19566461893209,0,0.789168805698781,0,0,0,0.150323419414493,0.207376382794494,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.34945333648406,0,0.0967563312890851,0.219267951258557,0.0821154570532092,0,0.0882561266915003,0.451961481561065,0,0,0.253243183823515,0.391102765469606,0.0801588202515337,0,0,0.576361668616424,0.229073192331831,1.02956998717179,0.432164393964449,0.124252535565433,0.235694034616795,0.135904206073614,0.104602846312333,0.101998217636322,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.157566364614447,0.0824158583811665,0.471824806979294,0.295282444544246,0,0,0.544813624446302,0.321506296930038,0.137539436597234,0.83088067605837,0.2249738915515,0,0.364497339948148,0.670869375198532,0.315222829196793,0.314727528809989,0,0.179287339332845,0.959575986597226,0,0,0.25426853765475,0.542999601753713,0,0,0,0.328370082997356,0.340776043570843,0,0.439656701034247,0,0.129282956361551,0.26446520348538,0,0,0,0,0,0,0.197611631897944,0.243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| ||
|short_description=p@chr12:120755326..120755340,- | |short_description=p@chr12:120755326..120755340,- | ||
}} | }} |
Latest revision as of 05:44, 24 July 2015
Short description: | p@chr12:120755326..120755340, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:120755326..120755340, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 6.97e-20 | 3 |
pro-NK cell | 6.97e-20 | 3 |
plasmacytoid dendritic cell | 8.34e-19 | 3 |
mature alpha-beta T cell | 4.66e-12 | 18 |
alpha-beta T cell | 4.66e-12 | 18 |
immature T cell | 4.66e-12 | 18 |
mature T cell | 4.66e-12 | 18 |
immature alpha-beta T cell | 4.66e-12 | 18 |
CD4-positive, alpha-beta T cell | 6.64e-10 | 6 |
basophil | 1.67e-09 | 3 |
T cell | 1.61e-08 | 25 |
pro-T cell | 1.61e-08 | 25 |
lymphoid lineage restricted progenitor cell | 2.38e-08 | 52 |
lymphocyte | 3.65e-08 | 53 |
common lymphoid progenitor | 3.65e-08 | 53 |
CD34-positive, CD38-negative hematopoietic stem cell | 1.42e-07 | 1 |
peptide hormone secreting cell | 3.20e-07 | 1 |
enteroendocrine cell | 3.20e-07 | 1 |
type D enteroendocrine cell | 3.20e-07 | 1 |
somatostatin secreting cell | 3.20e-07 | 1 |
pancreatic D cell | 3.20e-07 | 1 |
progenitor cell of endocrine pancreas | 3.20e-07 | 1 |
leukocyte | 3.84e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
putamen | 3.84e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.66e-07 | 4 |
breast cancer | 2.66e-07 | 4 |
somatostatinoma | 3.20e-07 | 1 |
lung small cell carcinoma | 5.89e-07 | 4 |