FFCP PHASE1:Hg19::chr4:2869695..2869706,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=118 | |EntrezGene=118 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=243 | |HGNC=243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_ENST00000503169,uc003gft.3_5end | |association_with_transcript=93bp_to_ENST00000503169,uc003gft.3_5end | ||
|cluster_id=chr4:2869695..2869706,+ | |||
|description=CAGE_peak_30_at_ADD1_5end | |description=CAGE_peak_30_at_ADD1_5end | ||
|id=chr4:2869695..2869706,+ | |id=chr4:2869695..2869706,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000746;2.19e-53;3!CL:0000737;2.22e-40;4!CL:0002494;5.84e-11;16 | |ontology_enrichment_celltype_v019=CL:0000746;2.19e-53;3!CL:0000737;2.22e-40;4!CL:0002494;5.84e-11;16 | ||
|ontology_enrichment_celltype_v019_2=CL:0000746,2.87e-53,3;CL:0000513,2.87e-53,3;CL:0000737,2.71e-40,4;CL:0002494,6.14e-11,16 | |||
|ontology_enrichment_development_v019=CL:0000513;2.19e-53;3!UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3 | |ontology_enrichment_development_v019=CL:0000513;2.19e-53;3!UBERON:0005425;2.21e-40;1!UBERON:0003056;1.83e-14;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.97e-39!115;UBERON:0001049!1.70e-37!57;UBERON:0005068!1.70e-37!57;UBERON:0006241!1.70e-37!57;UBERON:0007135!1.70e-37!57;UBERON:0003075!8.48e-32!86;UBERON:0007284!8.48e-32!86;UBERON:0002616!5.60e-31!59;UBERON:0002346!6.89e-30!90;UBERON:0001017!7.70e-30!82;UBERON:0005743!1.07e-29!86;UBERON:0000073!2.95e-29!94;UBERON:0001016!2.95e-29!94;UBERON:0001893!4.17e-29!34;UBERON:0002020!1.02e-28!34;UBERON:0003528!1.02e-28!34;UBERON:0002780!6.96e-28!41;UBERON:0001890!6.96e-28!41;UBERON:0006240!6.96e-28!41;UBERON:0002791!3.50e-27!33;UBERON:0003080!4.61e-27!42;UBERON:0000955!1.02e-26!69;UBERON:0006238!1.02e-26!69;UBERON:0001869!1.30e-25!32;UBERON:0003056!8.01e-20!61;UBERON:0002619!9.41e-19!22;UBERON:0000956!2.37e-18!25;UBERON:0000203!2.37e-18!25;UBERON:0001950!2.88e-18!20;UBERON:0000025!1.21e-17!194;UBERON:0004121!3.53e-15!169;UBERON:0000924!1.45e-14!173;UBERON:0006601!1.45e-14!173;UBERON:0000033!3.39e-14!123;UBERON:0000153!4.35e-14!129;UBERON:0007811!4.35e-14!129;UBERON:0002298!8.21e-14!8;UBERON:0000483!1.47e-13!309;UBERON:0000119!2.79e-13!312;UBERON:0004111!2.36e-12!241;UBERON:0002308!2.57e-12!9;UBERON:0000125!2.57e-12!9;UBERON:0003076!2.14e-11!15;UBERON:0003057!2.14e-11!15;UBERON:0000477!6.73e-11!286;UBERON:0004732!1.42e-10!13;UBERON:0001871!1.64e-09!7;UBERON:0002420!2.52e-09!9;UBERON:0007245!2.52e-09!9;UBERON:0010009!2.52e-09!9;UBERON:0010011!2.52e-09!9;UBERON:0000454!2.52e-09!9;UBERON:0000200!2.60e-09!6;UBERON:0009663!8.81e-09!7;UBERON:0004733!1.01e-08!12;UBERON:0002028!1.01e-08!12;UBERON:0007277!1.01e-08!12;UBERON:0000475!1.38e-08!365;UBERON:0001896!2.00e-08!3;UBERON:0005290!2.00e-08!3;UBERON:0010096!2.00e-08!3;UBERON:0006331!2.47e-07!3;UBERON:0000988!2.76e-07!3;UBERON:0000481!2.79e-07!347;UBERON:0000064!3.04e-07!219;UBERON:0002771!8.57e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!3.97e-39!115;UBERON:0001049!1.70e-37!57;UBERON:0005068!1.70e-37!57;UBERON:0006241!1.70e-37!57;UBERON:0007135!1.70e-37!57;UBERON:0003075!8.48e-32!86;UBERON:0007284!8.48e-32!86;UBERON:0002616!5.60e-31!59;UBERON:0002346!6.89e-30!90;UBERON:0001017!7.70e-30!82;UBERON:0005743!1.07e-29!86;UBERON:0000073!2.95e-29!94;UBERON:0001016!2.95e-29!94;UBERON:0001893!4.17e-29!34;UBERON:0002020!1.02e-28!34;UBERON:0003528!1.02e-28!34;UBERON:0002780!6.96e-28!41;UBERON:0001890!6.96e-28!41;UBERON:0006240!6.96e-28!41;UBERON:0002791!3.50e-27!33;UBERON:0003080!4.61e-27!42;UBERON:0000955!1.02e-26!69;UBERON:0006238!1.02e-26!69;UBERON:0001869!1.30e-25!32;UBERON:0003056!8.01e-20!61;UBERON:0002619!9.41e-19!22;UBERON:0000956!2.37e-18!25;UBERON:0000203!2.37e-18!25;UBERON:0001950!2.88e-18!20;UBERON:0000025!1.21e-17!194;UBERON:0004121!3.53e-15!169;UBERON:0000924!1.45e-14!173;UBERON:0006601!1.45e-14!173;UBERON:0000033!3.39e-14!123;UBERON:0000153!4.35e-14!129;UBERON:0007811!4.35e-14!129;UBERON:0002298!8.21e-14!8;UBERON:0000483!1.47e-13!309;UBERON:0000119!2.79e-13!312;UBERON:0004111!2.36e-12!241;UBERON:0002308!2.57e-12!9;UBERON:0000125!2.57e-12!9;UBERON:0003076!2.14e-11!15;UBERON:0003057!2.14e-11!15;UBERON:0000477!6.73e-11!286;UBERON:0004732!1.42e-10!13;UBERON:0001871!1.64e-09!7;UBERON:0002420!2.52e-09!9;UBERON:0007245!2.52e-09!9;UBERON:0010009!2.52e-09!9;UBERON:0010011!2.52e-09!9;UBERON:0000454!2.52e-09!9;UBERON:0000200!2.60e-09!6;UBERON:0009663!8.81e-09!7;UBERON:0004733!1.01e-08!12;UBERON:0002028!1.01e-08!12;UBERON:0007277!1.01e-08!12;UBERON:0000475!1.38e-08!365;UBERON:0001896!2.00e-08!3;UBERON:0005290!2.00e-08!3;UBERON:0010096!2.00e-08!3;UBERON:0006331!2.47e-07!3;UBERON:0000988!2.76e-07!3;UBERON:0000481!2.79e-07!347;UBERON:0000064!3.04e-07!219;UBERON:0002771!8.57e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.21e-40;1!UBERON:0001785;2.21e-40;1!UBERON:0002464;2.21e-40;1!UBERON:0004904;2.21e-40;1!UBERON:0001021;2.21e-40;1!UBERON:0003714;5.69e-21;2!UBERON:0005162;5.69e-21;2!UBERON:0000122;5.69e-21;2!UBERON:0002107;2.26e-09;19!UBERON:0006925;2.26e-09;19!UBERON:0000948;3.04e-08;22!UBERON:0007100;2.28e-07;25!UBERON:0002423;2.35e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.21e-40;1!UBERON:0001785;2.21e-40;1!UBERON:0002464;2.21e-40;1!UBERON:0004904;2.21e-40;1!UBERON:0001021;2.21e-40;1!UBERON:0003714;5.69e-21;2!UBERON:0005162;5.69e-21;2!UBERON:0000122;5.69e-21;2!UBERON:0002107;2.26e-09;19!UBERON:0006925;2.26e-09;19!UBERON:0000948;3.04e-08;22!UBERON:0007100;2.28e-07;25!UBERON:0002423;2.35e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.48e-40,1;UBERON:0001785,1.48e-40,1;UBERON:0002464,1.48e-40,1;UBERON:0004904,1.48e-40,1;UBERON:0001021,1.48e-40,1;UBERON:0003902,1.48e-40,1;UBERON:0005425,1.48e-40,1;UBERON:0003714,4.66e-21,2;UBERON:0005162,4.66e-21,2;UBERON:0000122,4.66e-21,2;UBERON:0001781,3.10e-11,4;UBERON:0002107,2.26e-09,19;UBERON:0006925,2.26e-09,19;UBERON:0008836,2.26e-09,19;UBERON:0008835,3.15e-08,22;UBERON:0003894,3.15e-08,22;UBERON:0000966,6.34e-08,6;UBERON:0005388,6.34e-08,6;UBERON:0001802,6.34e-08,6;UBERON:0009854,6.52e-08,23;UBERON:0000948,1.27e-07,24;UBERON:0005498,1.27e-07,24;UBERON:0004140,1.27e-07,24;UBERON:0009881,1.27e-07,24;UBERON:0004141,1.27e-07,24;UBERON:0003084,1.27e-07,24;UBERON:0007005,1.27e-07,24;UBERON:0004139,1.27e-07,24;UBERON:0004291,1.27e-07,24;UBERON:0007499,2.35e-07,25;UBERON:0009497,2.35e-07,25;UBERON:0000015,2.35e-07,25;UBERON:0002423,2.35e-07,25;UBERON:0006235,2.35e-07,25;UBERON:0004161,2.35e-07,25;UBERON:0009856,4.15e-07,26;UBERON:0007100,7.03e-07,27;UBERON:0001048,8.66e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.02290049474824,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,2.36315962672562,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0.236349546921671,0.0824158583811665,0.202210631562555,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0.242998226632099,0,0.630445658393585,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.58620893471233,1.32506888912221,0.129282956361551,0.39669780522807,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.443716206147409,0.683060432355218,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0.41023272848151,0,0.553258019713743,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.460409414939944,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,0.543931921527318,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.35350429851818,1.02290049474824,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,2.36315962672562,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0.189753732724185,0.317873157960757,0,0,0.141353071433941,0,0,0,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.684526894459965,0,0,0,0.279282401272254,0.229160424011684,0,0,0.429226048136571,0,0,0,0,0.236349546921671,0.0824158583811665,0.202210631562555,0,0,0,0.136203406111576,0,0,0.415440338029185,0,0,0.242998226632099,0,0.630445658393585,0.157363764404994,0,0,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0,0,0,0.58620893471233,1.32506888912221,0.129282956361551,0.39669780522807,0,0,0.320362237703084,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0.573409195690071,0.443716206147409,0.683060432355218,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0.159633859057151,0.41023272848151,0,0.553258019713743,0.322951291263702,1.42769420259154,0,0,0,0,0,0,0,0.225630985047772,0,0,0,0,0,0.607838261565552,0,0.413373593002368,0.317079050969534,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0.271878931907327,0.460409414939944,0,0,0.156986185701028,0.314231179832004,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.594092800654172,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0.286679166302903,0,0.543931921527318,0,0,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0,0,0.20686599172379,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p30@ADD1 | |short_description=p30@ADD1 | ||
}} | }} |
Latest revision as of 12:51, 17 September 2015
Short description: | p30@ADD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_ADD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000503169, uc003gft.3_5end |
EntrezGene: | ADD1 |
HGNC: | 243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 2.87e-53 | 3 |
cardiac muscle myoblast | 2.87e-53 | 3 |
striated muscle cell | 2.71e-40 | 4 |
cardiocyte | 6.14e-11 | 16 |