FFCP PHASE1:Hg19::chr10:100150910..100150935,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:100150910..100150935,- | |||
|description=CAGE_peak_at_chr10:100150910..100150935,- | |description=CAGE_peak_at_chr10:100150910..100150935,- | ||
|id=chr10:100150910..100150935,- | |id=chr10:100150910..100150935,- | ||
|ontology_enrichment_celltype=CL:0000037!7.81e-21!172;CL:0000566!7.81e-21!172;CL:0000988!1.15e-20!182;CL:0002032!2.76e-20!165;CL:0000837!2.76e-20!165;CL:0000763!5.65e-12!112;CL:0000049!5.65e-12!112;CL:0000738!7.42e-11!140;CL:0002031!2.36e-09!124;CL:0000838!9.78e-09!52;CL:0000542!1.76e-08!53;CL:0000051!1.76e-08!53;CL:0002087!2.57e-08!119;CL:0000134!2.33e-07!358;CL:0002274!3.35e-07!5;CL:0000457!3.35e-07!5;CL:0002191!3.35e-07!5;CL:0000097!3.35e-07!5;CL:0000831!3.35e-07!5;CL:0002028!3.35e-07!5;CL:0002320!6.21e-07!365;CL:0000623!7.02e-07!3;CL:0000825!7.02e-07!3 | |ontology_enrichment_celltype=CL:0000037!7.81e-21!172;CL:0000566!7.81e-21!172;CL:0000988!1.15e-20!182;CL:0002032!2.76e-20!165;CL:0000837!2.76e-20!165;CL:0000763!5.65e-12!112;CL:0000049!5.65e-12!112;CL:0000738!7.42e-11!140;CL:0002031!2.36e-09!124;CL:0000838!9.78e-09!52;CL:0000542!1.76e-08!53;CL:0000051!1.76e-08!53;CL:0002087!2.57e-08!119;CL:0000134!2.33e-07!358;CL:0002274!3.35e-07!5;CL:0000457!3.35e-07!5;CL:0002191!3.35e-07!5;CL:0000097!3.35e-07!5;CL:0000831!3.35e-07!5;CL:0002028!3.35e-07!5;CL:0002320!6.21e-07!365;CL:0000623!7.02e-07!3;CL:0000825!7.02e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0002032,8.81e-16,161;CL:0000837,8.81e-16,161;CL:0000037,6.43e-15,168;CL:0000988,6.58e-14,177;CL:0000763,1.65e-13,108;CL:0000049,1.65e-13,108 | |||
|ontology_enrichment_development_v019=UBERON:0008801;6.68e-07;1 | |ontology_enrichment_development_v019=UBERON:0008801;6.68e-07;1 | ||
|ontology_enrichment_disease=DOID:1240!2.36e-25!39;DOID:2531!6.28e-21!51;DOID:0060083!6.28e-21!51;DOID:8692!1.70e-20!31;DOID:0050686!3.47e-07!137 | |ontology_enrichment_disease=DOID:1240!2.36e-25!39;DOID:2531!6.28e-21!51;DOID:0060083!6.28e-21!51;DOID:8692!1.70e-20!31;DOID:0050686!3.47e-07!137 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.64e-28;31!DOID:1240;1.25e-23;39!DOID:2531;1.29e-15;51!DOID:0060083;1.29e-15;51!DOID:630;2.10e-07;1!DOID:0050177;2.10e-07;1!DOID:0050427;2.10e-07;1!DOID:8552;3.10e-07;1!DOID:225;6.68e-07;1 | |ontology_enrichment_disease_v019=DOID:8692;4.64e-28;31!DOID:1240;1.25e-23;39!DOID:2531;1.29e-15;51!DOID:0060083;1.29e-15;51!DOID:630;2.10e-07;1!DOID:0050177;2.10e-07;1!DOID:0050427;2.10e-07;1!DOID:8552;3.10e-07;1!DOID:225;6.68e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:1240,1.04e-30,39;DOID:8692,2.89e-29,31;DOID:2531,9.87e-23,51;DOID:0060083,9.87e-23,51;DOID:0050686,1.84e-07,137;DOID:630,1.98e-07,1;DOID:0050177,1.98e-07,1;DOID:0050427,1.98e-07,1;DOID:8552,2.52e-07,1;DOID:225,4.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!5.89e-17!15;UBERON:0000179!5.89e-17!15;UBERON:0000463!5.89e-17!15;UBERON:0002390!3.03e-10!102;UBERON:0003061!3.03e-10!102;UBERON:0002193!1.23e-08!112;UBERON:0002384!3.55e-07!375 | |ontology_enrichment_uberon=UBERON:0000178!5.89e-17!15;UBERON:0000179!5.89e-17!15;UBERON:0000463!5.89e-17!15;UBERON:0002390!3.03e-10!102;UBERON:0003061!3.03e-10!102;UBERON:0002193!1.23e-08!112;UBERON:0002384!3.55e-07!375 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-17;15!UBERON:0000179;1.67e-17;15!UBERON:0000463;1.67e-17;15!UBERON:0002390;1.73e-07;32!UBERON:0001831;6.68e-07;1!UBERON:0001567;6.68e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.67e-17;15!UBERON:0000179;1.67e-17;15!UBERON:0000463;1.67e-17;15!UBERON:0002390;1.73e-07;32!UBERON:0001831;6.68e-07;1!UBERON:0001567;6.68e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.78e-17,15;UBERON:0000179,1.78e-17,15;UBERON:0000463,1.78e-17,15;UBERON:0002390,6.11e-10,98;UBERON:0003061,6.11e-10,98;UBERON:0002193,9.44e-09,108;UBERON:0001831,9.73e-07,1;UBERON:0001567,9.73e-07,1;UBERON:0008801,9.73e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,1.47994114143309,0.829050053357545,0,0,0,0,0.679856056185397,0,0.68725489096526,0,0,0,1.90090408889675,0,0,2.49861453104692,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,0.870648686496336,1.59549552622638,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.743155811443641,0,0.16798212819886,0,0,0,0,2.95597942737566,4.57851856868775,0.829312462163088,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.336255431980582,0.788123040807709,1.2937654491571,0.513372145118994,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,1.52927441428475,1.13929437434833,0.714695326373367,1.23408681925858,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0,0.324621940274555,1.12318871245384,0,3.44695770700651,0,0,0,0,0.425846237690326,5.49608551609224,2.76516687877612,3.80249383417107,3.17013369252626,16.8033762045755,0,1.23087398947712,3.2454681417118,0.99921590399346,1.4098700508785,0,0.146508179271894,0,2.11742430127209,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,2.04628948090749,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4167266571899,0.627921025580099,2.99181027420282,0,0,0,0,1.74830236878417,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0.829412415681711,1.06336685823198,0,0.751288044986092,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92045113449454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,3.52625341533556 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.152826811495903,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.393010762749165,0,0.167186495390678,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0,1.47994114143309,0.829050053357545,0,0,0,0,0.679856056185397,0,0.68725489096526,0,0,0,1.90090408889675,0,0,2.49861453104692,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,0.870648686496336,1.59549552622638,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0,0.743155811443641,0,0.16798212819886,0,0,0,0,2.95597942737566,4.57851856868775,0.829312462163088,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.336255431980582,0.788123040807709,1.2937654491571,0.513372145118994,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.356128142586949,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,2.53723804616085,1.52927441428475,1.13929437434833,0.714695326373367,1.23408681925858,1.94541993357815,1.08006287447623,1.58625035258854,0,0,0,0,0,0,0.159426272728822,0.399158742865633,0,0,0.324621940274555,1.12318871245384,0,3.44695770700651,0,0,0,0,0.425846237690326,5.49608551609224,2.76516687877612,3.80249383417107,3.17013369252626,16.8033762045755,0,1.23087398947712,3.2454681417118,0.99921590399346,1.4098700508785,0,0.146508179271894,0,2.11742430127209,0,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0.246169610922139,0,0,0,2.04628948090749,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4167266571899,0.627921025580099,2.99181027420282,0,0,0,0,1.74830236878417,0,0,0,0,0,0,0,0,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0.548167698587004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0.310525913752519,0.829412415681711,1.06336685823198,0,0.751288044986092,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.92045113449454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,3.52625341533556 | ||
|short_description=p@chr10:100150910..100150935,- | |short_description=p@chr10:100150910..100150935,- | ||
}} | }} |
Latest revision as of 09:22, 23 July 2015
Short description: | p@chr10:100150910..100150935, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:100150910..100150935, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic oligopotent progenitor cell | 8.81e-16 | 161 |
hematopoietic multipotent progenitor cell | 8.81e-16 | 161 |
hematopoietic stem cell | 6.43e-15 | 168 |
hematopoietic cell | 6.58e-14 | 177 |
myeloid cell | 1.65e-13 | 108 |
common myeloid progenitor | 1.65e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
blood | 1.78e-17 | 15 |
haemolymphatic fluid | 1.78e-17 | 15 |
organism substance | 1.78e-17 | 15 |
hematopoietic system | 6.11e-10 | 98 |
blood island | 6.11e-10 | 98 |
hemolymphoid system | 9.44e-09 | 108 |
parotid gland | 9.73e-07 | 1 |
cheek | 9.73e-07 | 1 |
parotid gland primordium | 9.73e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.04e-30 | 39 |
myeloid leukemia | 2.89e-29 | 31 |
hematologic cancer | 9.87e-23 | 51 |
immune system cancer | 9.87e-23 | 51 |
organ system cancer | 1.84e-07 | 137 |
genetic disease | 1.98e-07 | 1 |
monogenic disease | 1.98e-07 | 1 |
xeroderma pigmentosum | 1.98e-07 | 1 |
chronic myeloid leukemia | 2.52e-07 | 1 |
syndrome | 4.57e-07 | 1 |