FFCP PHASE1:Hg19::chr7:45952439..45952454,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC0 | |UniProt=Q71RC0 | ||
|association_with_transcript=172bp_to_AF370418_5end | |association_with_transcript=172bp_to_AF370418_5end | ||
|cluster_id=chr7:45952439..45952454,- | |||
|coexpression_cluster_id=C223 | |coexpression_cluster_id=C223 | ||
|description=CAGE_peak_10_at_IGFBP3_5end | |description=CAGE_peak_10_at_IGFBP3_5end | ||
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|ontology_enrichment_celltype=CL:0000055!5.34e-13!180;CL:0000057!2.95e-12!75;CL:0002620!1.84e-10!23;CL:0002334!3.92e-07!12;CL:0000153!6.98e-07!9;CL:0000447!6.98e-07!9 | |ontology_enrichment_celltype=CL:0000055!5.34e-13!180;CL:0000057!2.95e-12!75;CL:0002620!1.84e-10!23;CL:0002334!3.92e-07!12;CL:0000153!6.98e-07!9;CL:0000447!6.98e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002620;7.37e-19;23!CL:0000153;1.53e-15;9!CL:0000447;1.53e-15;9!CL:0000138;1.16e-12;6!CL:0000327;2.69e-11;15!CL:0002580;1.30e-08;3!CL:0000499;1.55e-08;28!CL:0002579;2.33e-08;3!CL:0002334;2.58e-07;12 | |ontology_enrichment_celltype_v019=CL:0002620;7.37e-19;23!CL:0000153;1.53e-15;9!CL:0000447;1.53e-15;9!CL:0000138;1.16e-12;6!CL:0000327;2.69e-11;15!CL:0002580;1.30e-08;3!CL:0000499;1.55e-08;28!CL:0002579;2.33e-08;3!CL:0002334;2.58e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.79e-19,23;CL:0000057,2.48e-16,76;CL:0000153,1.20e-15,9;CL:0000447,1.20e-15,9;CL:0000058,9.08e-13,6;CL:0000138,9.08e-13,6;CL:0000327,2.28e-11,15;CL:0002580,1.25e-08,3;CL:0000499,1.39e-08,28;CL:0002579,2.93e-08,3;CL:0000048,8.23e-08,427;CL:0000723,1.59e-07,433;CL:0002334,2.82e-07,12;CL:0000034,3.72e-07,441;CL:0000134,5.11e-07,354 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:17!3.94e-07!5;DOID:450!3.94e-07!5;DOID:66!3.94e-07!5;DOID:423!3.94e-07!5;DOID:0080000!3.94e-07!5;DOID:11722!3.94e-07!5 | |ontology_enrichment_disease=DOID:17!3.94e-07!5;DOID:450!3.94e-07!5;DOID:66!3.94e-07!5;DOID:423!3.94e-07!5;DOID:0080000!3.94e-07!5;DOID:11722!3.94e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:17;6.03e-15;5!DOID:450;6.03e-15;5!DOID:66;6.03e-15;5!DOID:423;6.03e-15;5!DOID:0080000;6.03e-15;5!DOID:11722;6.03e-15;5 | |ontology_enrichment_disease_v019=DOID:17;6.03e-15;5!DOID:450;6.03e-15;5!DOID:66;6.03e-15;5!DOID:423;6.03e-15;5!DOID:0080000;6.03e-15;5!DOID:11722;6.03e-15;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,5.99e-15,5;DOID:450,5.99e-15,5;DOID:66,5.99e-15,5;DOID:423,5.99e-15,5;DOID:0080000,5.99e-15,5;DOID:11722,5.99e-15,5 | |||
|ontology_enrichment_uberon=UBERON:0005631!5.49e-09!14;UBERON:0000158!5.49e-09!14;UBERON:0002097!5.07e-08!40;UBERON:0002199!8.77e-08!45;UBERON:0002416!8.77e-08!45;UBERON:0003688!3.72e-07!6;UBERON:0002358!3.72e-07!6;UBERON:0003684!3.72e-07!6;UBERON:0001178!3.72e-07!6;UBERON:0003124!4.86e-07!7 | |ontology_enrichment_uberon=UBERON:0005631!5.49e-09!14;UBERON:0000158!5.49e-09!14;UBERON:0002097!5.07e-08!40;UBERON:0002199!8.77e-08!45;UBERON:0002416!8.77e-08!45;UBERON:0003688!3.72e-07!6;UBERON:0002358!3.72e-07!6;UBERON:0003684!3.72e-07!6;UBERON:0001178!3.72e-07!6;UBERON:0003124!4.86e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.73e-14;9!UBERON:0000042;2.73e-14;9!UBERON:0003688;2.62e-11;6!UBERON:0002358;2.62e-11;6!UBERON:0003684;2.62e-11;6!UBERON:0001178;2.62e-11;6!UBERON:0002097;2.43e-10;41!UBERON:0001443;3.60e-08;11!UBERON:0002199;1.01e-07;46!UBERON:0002416;1.01e-07;46 | |ontology_enrichment_uberon_v019=UBERON:0004457;2.73e-14;9!UBERON:0000042;2.73e-14;9!UBERON:0003688;2.62e-11;6!UBERON:0002358;2.62e-11;6!UBERON:0003684;2.62e-11;6!UBERON:0001178;2.62e-11;6!UBERON:0002097;2.43e-10;41!UBERON:0001443;3.60e-08;11!UBERON:0002199;1.01e-07;46!UBERON:0002416;1.01e-07;46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.52e-12,41;UBERON:0003688,3.47e-11,6;UBERON:0002358,3.47e-11,6;UBERON:0003684,3.47e-11,6;UBERON:0001178,3.47e-11,6;UBERON:0002199,8.99e-11,46;UBERON:0002416,8.99e-11,46;UBERON:0004457,2.27e-10,12;UBERON:0000042,2.27e-10,12;UBERON:0001443,3.11e-08,11 | |||
|phase1_expression=2.18014055124668,1.49870366723688,2.25527046553554,8.00586386825043,0.446961094427288,5.23403114460221,0,0,0,0.491467873003018,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,50.2400421814547,31.0829504594252,25.492987337105,1.5905718941022,5.83961844363163,0,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.132409180813219,0.860509862246441,0,1.12135520028461,1.06748995729705,0.74000264525148,0,0,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22595118319608,0,0.113432183160021,4.84352016359927,3.63047560991565,4.66250182551036,8.40255069036326,3.09157587715317,4.3798891807757,7.258557396932,0.675105328965065,1.94874010322397,14.1362913576704,6.35144300631865,0.484938170456436,13.1353549231147,6.85114267947954,1.18692414617341,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,0,0.928735856063958,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.904318131178758,0.871533458600294,0,0,0,0,0.479249710983165,2.29723871668228,0,0.723906533337896,1.2328579353023,0.537182889719687,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0,0,0.623912584592421,1.24900292158013,0.473107245101804,0.117141414992713,0.300946099727719,0,0,0.664225598535437,0.553107505625109,0,0,0,0,0,0,0.303127571446259,1.66435439510497,0.604780586659361,1.73675465473144,1.07423381301644,2.52594084989766,1.28139149255701,1.53512174720011,1.12597744800525,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.581051892299796,0,0.40101294060657,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,1.6068392984416,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.929691098594572,5.35180989612088,0,0,0,0,0.9266210955196,3.2918723950658,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0,1.58510321173008,0,0,0.731140468893853,1.05650146756755,0.272999822815972,0,1.13008116620243,0.551365343546124,3.98063385144732,6.57676327880644,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,2.32218398827431,3.95153871551882,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,3.10367830158997,1.48482340416319,1.84296421259539,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,14.3078210324431,0,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.153900517007594,0,0,0,0,1.5950057986596,0.0915975934018623,7.46248686426089,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.694238953340524,0,0,0,1.20390222730132,0,0.0730893170861856,0.0821154570532092,0,0,0.225980740780532,0,0,0,0.195551382734803,0.0801588202515337,0,2.99714414373195,0,0,0.171594997861965,0,0,0,0,0,0.407992870545287,0,0,0,0,0,0,0,0,0,0,0.429226048136571,0,0.0671834724867263,1.44119953416961,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0.0524545881349981,0,0.896436696664224,0,0.714695326373367,0,0.5085370753095,2.71499800876856,0,0.326587360109409,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701139929541673,0.554805861502613,0.757612021100357,0.754703705257725,4.44905610798268,0.228840068396924,2.57092570397506,0.621748802331122,0,0.318593534327405,0,0,0.414706207840855,0.265841714557995,0,0.150257608997218,2.28483127301277,0,0,0,0.928067519756987,1.59238355479446,0,0,1.01024846629776,1.26184898228651,0,0,0.260994291965212,1.13352962756136,0,0,0.537266523244462,1.54400723580486,0.219284049578707,0,0.192914038270915,0.337884881306145,0.256241518587947,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0.212574920101683,0,0,0.636008701306837,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0.577628330751691,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,1.27762427639595,0,0,0,0,0.709618961301111,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,6.69375532777726,18.632315827595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0.447421727191169,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71883383500507,0,0,0,1.2498775702396,0,0.160482733378337,0,0,0,0,0,0,0,0.371995018166751,5.54610754357702,5.62414530760926,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,0,0,0.112131862580613,0.12729431655633,0.404234377916439,0,0.3422333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| ||
|short_description=p10@IGFBP3 | |short_description=p10@IGFBP3 | ||
}} | }} |
Latest revision as of 19:18, 18 September 2015
Short description: | p10@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 172bp_to_AF370418_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | Q71RC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.79e-19 | 23 |
fibroblast | 2.48e-16 | 76 |
GAG secreting cell | 1.20e-15 | 9 |
carbohydrate secreting cell | 1.20e-15 | 9 |
chondroblast | 9.08e-13 | 6 |
chondrocyte | 9.08e-13 | 6 |
extracellular matrix secreting cell | 2.28e-11 | 15 |
preadipocyte of the breast | 1.25e-08 | 3 |
stromal cell | 1.39e-08 | 28 |
omentum preadipocyte | 2.93e-08 | 3 |
multi fate stem cell | 8.23e-08 | 427 |
somatic stem cell | 1.59e-07 | 433 |
preadipocyte | 2.82e-07 | 12 |
stem cell | 3.72e-07 | 441 |
mesenchymal cell | 5.11e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.52e-12 | 41 |
omentum | 3.47e-11 | 6 |
peritoneum | 3.47e-11 | 6 |
abdominal cavity | 3.47e-11 | 6 |
visceral peritoneum | 3.47e-11 | 6 |
integument | 8.99e-11 | 46 |
integumental system | 8.99e-11 | 46 |
cavity lining | 2.27e-10 | 12 |
serous membrane | 2.27e-10 | 12 |
chest | 3.11e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 5.99e-15 | 5 |
myotonic disease | 5.99e-15 | 5 |
muscle tissue disease | 5.99e-15 | 5 |
myopathy | 5.99e-15 | 5 |
muscular disease | 5.99e-15 | 5 |
myotonic dystrophy | 5.99e-15 | 5 |