FFCP PHASE1:Hg19::chr12:3000075..3000092,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7289 | |EntrezGene=7289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12425 | |HGNC=12425 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBZ9 | |UniProt=F8WBZ9 | ||
|association_with_transcript=2bp_to_ENST00000397132_5end | |association_with_transcript=2bp_to_ENST00000397132_5end | ||
|cluster_id=chr12:3000075..3000092,+ | |||
|description=CAGE_peak_3_at_TULP3_5end | |description=CAGE_peak_3_at_TULP3_5end | ||
|id=chr12:3000075..3000092,+ | |id=chr12:3000075..3000092,+ | ||
|ontology_enrichment_celltype=CL:0000055!8.49e-30!180;CL:0000057!3.89e-19!75;CL:0002620!9.19e-10!23;CL:0000499!1.18e-07!27 | |ontology_enrichment_celltype=CL:0000055!8.49e-30!180;CL:0000057!3.89e-19!75;CL:0002620!9.19e-10!23;CL:0000499!1.18e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;4.16e-10;23!CL:0000057;2.30e-08;73!CL:0000499;1.93e-07;28 | |ontology_enrichment_celltype_v019=CL:0002620;4.16e-10;23!CL:0000057;2.30e-08;73!CL:0000499;1.93e-07;28 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.28e-19,76;CL:0002620,7.44e-10,23;CL:0000499,1.85e-07,28 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.48e-19!365;UBERON:0000119!4.87e-15!312;UBERON:0000483!2.36e-14!309;UBERON:0000477!5.53e-12!286;UBERON:0000481!3.90e-11!347;UBERON:0000468!1.16e-09!659;UBERON:0000073!6.57e-09!94;UBERON:0001016!6.57e-09!94;UBERON:0000914!7.49e-09!83;UBERON:0002329!7.49e-09!83;UBERON:0003077!7.49e-09!83;UBERON:0003059!7.49e-09!83;UBERON:0007282!7.49e-09!83;UBERON:0009618!7.49e-09!83;UBERON:0007285!7.49e-09!83;UBERON:0000924!8.82e-09!173;UBERON:0006601!8.82e-09!173;UBERON:0004111!9.04e-09!241;UBERON:0000025!1.14e-08!194;UBERON:0004121!1.49e-08!169;UBERON:0001017!4.11e-08!82;UBERON:0000033!4.46e-08!123;UBERON:0005743!4.66e-08!86;UBERON:0002346!7.47e-08!90;UBERON:0003075!1.16e-07!86;UBERON:0007284!1.16e-07!86;UBERON:0000955!1.30e-07!69;UBERON:0006238!1.30e-07!69;UBERON:0004290!1.37e-07!70;UBERON:0005256!1.95e-07!143;UBERON:0000153!2.24e-07!129;UBERON:0007811!2.24e-07!129;UBERON:0002616!2.84e-07!59;UBERON:0002100!3.62e-07!216;UBERON:0002097!3.92e-07!40;UBERON:0000486!4.26e-07!82;UBERON:0002049!6.44e-07!79;UBERON:0007798!6.44e-07!79 | |ontology_enrichment_uberon=UBERON:0000475!9.48e-19!365;UBERON:0000119!4.87e-15!312;UBERON:0000483!2.36e-14!309;UBERON:0000477!5.53e-12!286;UBERON:0000481!3.90e-11!347;UBERON:0000468!1.16e-09!659;UBERON:0000073!6.57e-09!94;UBERON:0001016!6.57e-09!94;UBERON:0000914!7.49e-09!83;UBERON:0002329!7.49e-09!83;UBERON:0003077!7.49e-09!83;UBERON:0003059!7.49e-09!83;UBERON:0007282!7.49e-09!83;UBERON:0009618!7.49e-09!83;UBERON:0007285!7.49e-09!83;UBERON:0000924!8.82e-09!173;UBERON:0006601!8.82e-09!173;UBERON:0004111!9.04e-09!241;UBERON:0000025!1.14e-08!194;UBERON:0004121!1.49e-08!169;UBERON:0001017!4.11e-08!82;UBERON:0000033!4.46e-08!123;UBERON:0005743!4.66e-08!86;UBERON:0002346!7.47e-08!90;UBERON:0003075!1.16e-07!86;UBERON:0007284!1.16e-07!86;UBERON:0000955!1.30e-07!69;UBERON:0006238!1.30e-07!69;UBERON:0004290!1.37e-07!70;UBERON:0005256!1.95e-07!143;UBERON:0000153!2.24e-07!129;UBERON:0007811!2.24e-07!129;UBERON:0002616!2.84e-07!59;UBERON:0002100!3.62e-07!216;UBERON:0002097!3.92e-07!40;UBERON:0000486!4.26e-07!82;UBERON:0002049!6.44e-07!79;UBERON:0007798!6.44e-07!79 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.64e-15,309;UBERON:0000483,1.31e-14,306;UBERON:0010314,3.16e-11,132;UBERON:0001016,4.72e-09,89;UBERON:0002346,6.56e-09,86;UBERON:0003075,9.91e-09,82;UBERON:0007284,9.91e-09,82;UBERON:0004121,1.22e-08,171;UBERON:0000924,1.22e-08,171;UBERON:0006601,1.22e-08,171;UBERON:0004111,1.77e-08,240;UBERON:0000025,1.98e-08,192;UBERON:0007503,2.36e-08,78;UBERON:0001017,3.40e-08,81;UBERON:0000955,9.16e-08,68;UBERON:0006238,9.16e-08,68;UBERON:0007524,9.76e-08,73;UBERON:0002329,1.11e-07,71;UBERON:0003059,1.11e-07,71;UBERON:0007282,1.11e-07,71;UBERON:0004290,1.11e-07,71;UBERON:0009618,1.11e-07,71;UBERON:0003077,1.32e-07,72;UBERON:0007285,1.32e-07,72;UBERON:0003104,1.40e-07,160;UBERON:0009142,1.40e-07,160;UBERON:0010371,1.57e-07,104;UBERON:0000486,4.12e-07,83;UBERON:0002049,6.38e-07,78;UBERON:0007798,6.38e-07,78;UBERON:0001049,8.11e-07,56;UBERON:0005068,8.11e-07,56;UBERON:0006241,8.11e-07,56;UBERON:0007135,8.11e-07,56;UBERON:0002097,9.83e-07,41 | |||
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| ||
|short_description=p3@TULP3 | |short_description=p3@TULP3 | ||
}} | }} |
Latest revision as of 02:24, 18 September 2015
Short description: | p3@TULP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TULP3_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000397132_5end |
EntrezGene: | TULP3 |
HGNC: | 12425 |
UniProt: | F8WBZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.28e-19 | 76 |
skin fibroblast | 7.44e-10 | 23 |
stromal cell | 1.85e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
cell layer | 2.64e-15 | 309 |
epithelium | 1.31e-14 | 306 |
structure with developmental contribution from neural crest | 3.16e-11 | 132 |
nervous system | 4.72e-09 | 89 |
neurectoderm | 6.56e-09 | 86 |
neural plate | 9.91e-09 | 82 |
presumptive neural plate | 9.91e-09 | 82 |
ectoderm-derived structure | 1.22e-08 | 171 |
ectoderm | 1.22e-08 | 171 |
presumptive ectoderm | 1.22e-08 | 171 |
anatomical conduit | 1.77e-08 | 240 |
tube | 1.98e-08 | 192 |
epithelial vesicle | 2.36e-08 | 78 |
central nervous system | 3.40e-08 | 81 |
brain | 9.16e-08 | 68 |
future brain | 9.16e-08 | 68 |
dense mesenchyme tissue | 9.76e-08 | 73 |
somite | 1.11e-07 | 71 |
presomitic mesoderm | 1.11e-07 | 71 |
presumptive segmental plate | 1.11e-07 | 71 |
dermomyotome | 1.11e-07 | 71 |
trunk paraxial mesoderm | 1.11e-07 | 71 |
paraxial mesoderm | 1.32e-07 | 72 |
presumptive paraxial mesoderm | 1.32e-07 | 72 |
mesenchyme | 1.40e-07 | 160 |
entire embryonic mesenchyme | 1.40e-07 | 160 |
ecto-epithelium | 1.57e-07 | 104 |
multilaminar epithelium | 4.12e-07 | 83 |
vasculature | 6.38e-07 | 78 |
vascular system | 6.38e-07 | 78 |
neural tube | 8.11e-07 | 56 |
neural rod | 8.11e-07 | 56 |
future spinal cord | 8.11e-07 | 56 |
neural keel | 8.11e-07 | 56 |
skin of body | 9.83e-07 | 41 |