FFCP PHASE1:Hg19::chr2:97536471..97536486,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54910 | |EntrezGene=54910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10731 | |HGNC=10731 | ||
|TSSclassifier=strong | |||
|UniProt=C9J4M7 | |UniProt=C9J4M7 | ||
|association_with_transcript=7bp_to_ENST00000449330_5end | |association_with_transcript=7bp_to_ENST00000449330_5end | ||
|cluster_id=chr2:97536471..97536486,- | |||
|description=CAGE_peak_7_at_SEMA4C_5end | |description=CAGE_peak_7_at_SEMA4C_5end | ||
|id=chr2:97536471..97536486,- | |id=chr2:97536471..97536486,- | ||
|ontology_enrichment_celltype=CL:0000791!5.69e-15!18;CL:0000789!5.69e-15!18;CL:0002420!5.69e-15!18;CL:0002419!5.69e-15!18;CL:0000790!5.69e-15!18;CL:0000084!1.05e-10!25;CL:0000827!1.05e-10!25;CL:0000148!1.49e-10!10;CL:0000541!1.49e-10!10;CL:0000625!7.80e-10!11;CL:0000624!4.87e-08!6;CL:0000147!7.51e-07!14 | |ontology_enrichment_celltype=CL:0000791!5.69e-15!18;CL:0000789!5.69e-15!18;CL:0002420!5.69e-15!18;CL:0002419!5.69e-15!18;CL:0000790!5.69e-15!18;CL:0000084!1.05e-10!25;CL:0000827!1.05e-10!25;CL:0000148!1.49e-10!10;CL:0000541!1.49e-10!10;CL:0000625!7.80e-10!11;CL:0000624!4.87e-08!6;CL:0000147!7.51e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000148;1.29e-20;10!CL:0002567;1.36e-18;3!CL:0000623;2.98e-17;3!CL:0000147;1.46e-14;14!CL:0000791;2.16e-14;18!CL:0000789;2.16e-14;18!CL:0002419;2.16e-14;18!CL:0000625;1.38e-12;11!CL:0000084;4.09e-10;25!CL:0000710;5.18e-10;20!CL:0002541;1.40e-08;3!CL:0000767;3.37e-08;3!CL:0000075;2.96e-07;27!CL:0002566;4.25e-07;1 | |ontology_enrichment_celltype_v019=CL:0000148;1.29e-20;10!CL:0002567;1.36e-18;3!CL:0000623;2.98e-17;3!CL:0000147;1.46e-14;14!CL:0000791;2.16e-14;18!CL:0000789;2.16e-14;18!CL:0002419;2.16e-14;18!CL:0000625;1.38e-12;11!CL:0000084;4.09e-10;25!CL:0000710;5.18e-10;20!CL:0002541;1.40e-08;3!CL:0000767;3.37e-08;3!CL:0000075;2.96e-07;27!CL:0002566;4.25e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.29e-20,10;CL:0000541,1.29e-20,10;CL:0002567,1.45e-18,3;CL:0000623,1.91e-17,3;CL:0000825,1.91e-17,3;CL:0000147,1.46e-14,14;CL:0000791,2.04e-14,18;CL:0000789,2.04e-14,18;CL:0002420,2.04e-14,18;CL:0002419,2.04e-14,18;CL:0000790,2.04e-14,18;CL:0000625,1.34e-12,11;CL:0000084,3.92e-10,25;CL:0000827,3.92e-10,25;CL:0000710,5.19e-10,20;CL:0000838,5.71e-09,52;CL:0000542,9.09e-09,53;CL:0000051,9.09e-09,53;CL:0002541,1.33e-08,3;CL:0000767,2.70e-08,3;CL:0000075,2.97e-07,27;CL:0002566,4.25e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.16e-14;18 | |ontology_enrichment_development_v019=CL:0000790;2.16e-14;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.88e-13;4!DOID:1612;1.88e-13;4!DOID:1799;9.23e-07;1!DOID:0050619;9.23e-07;1!DOID:10165;9.23e-07;1!DOID:1357;9.23e-07;1!DOID:1798;9.23e-07;1 | |ontology_enrichment_disease_v019=DOID:5093;1.88e-13;4!DOID:1612;1.88e-13;4!DOID:1799;9.23e-07;1!DOID:0050619;9.23e-07;1!DOID:10165;9.23e-07;1!DOID:1357;9.23e-07;1!DOID:1798;9.23e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.26e-13,4;DOID:1612,1.26e-13,4 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0001764;9.23e-07;1!UBERON:0001825;9.23e-07;1 | |ontology_enrichment_uberon_v019=UBERON:0003124;1.40e-08;3!UBERON:0000920;1.40e-08;3!UBERON:0001764;9.23e-07;1!UBERON:0001825;9.23e-07;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.33e-08,3 | |||
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| ||
|short_description=p7@SEMA4C | |short_description=p7@SEMA4C | ||
}} | }} |
Latest revision as of 02:04, 19 September 2015
Short description: | p7@SEMA4C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SEMA4C_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000449330_5end |
EntrezGene: | SEMA4C |
HGNC: | 10731 |
UniProt: | C9J4M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.29e-20 | 10 |
melanoblast | 1.29e-20 | 10 |
light melanocyte | 1.45e-18 | 3 |
natural killer cell | 1.91e-17 | 3 |
pro-NK cell | 1.91e-17 | 3 |
pigment cell | 1.46e-14 | 14 |
mature alpha-beta T cell | 2.04e-14 | 18 |
alpha-beta T cell | 2.04e-14 | 18 |
immature T cell | 2.04e-14 | 18 |
mature T cell | 2.04e-14 | 18 |
immature alpha-beta T cell | 2.04e-14 | 18 |
CD8-positive, alpha-beta T cell | 1.34e-12 | 11 |
T cell | 3.92e-10 | 25 |
pro-T cell | 3.92e-10 | 25 |
neurecto-epithelial cell | 5.19e-10 | 20 |
lymphoid lineage restricted progenitor cell | 5.71e-09 | 52 |
lymphocyte | 9.09e-09 | 53 |
common lymphoid progenitor | 9.09e-09 | 53 |
chorionic membrane mesenchymal stem cell | 1.33e-08 | 3 |
basophil | 2.70e-08 | 3 |
columnar/cuboidal epithelial cell | 2.97e-07 | 27 |
dark melanocyte | 4.25e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.33e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.26e-13 | 4 |
breast cancer | 1.26e-13 | 4 |