FFCP PHASE1:Hg19::chr22:39493207..39493223,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=164668 | |EntrezGene=164668 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24100 | |HGNC=24100 | ||
|TSSclassifier=strong | |||
|UniProt=E9PF38,Q6NTF7,B7TQM5,B7TQM9,B7TQM3 | |UniProt=E9PF38,Q6NTF7,B7TQM5,B7TQM9,B7TQM3 | ||
|association_with_transcript=-5bp_to_ENST00000348946,ENST00000421988,ENST00000442487,NM_001166002,NM_001166003,NM_001166004,NM_181773_5end | |association_with_transcript=-5bp_to_ENST00000348946,ENST00000421988,ENST00000442487,NM_001166002,NM_001166003,NM_001166004,NM_181773_5end | ||
|cluster_id=chr22:39493207..39493223,+ | |||
|coexpression_cluster_id=C239 | |coexpression_cluster_id=C239 | ||
|description=CAGE_peak_3_at_APOBEC3H_5end | |description=CAGE_peak_3_at_APOBEC3H_5end | ||
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|ontology_enrichment_celltype=CL:0000542!1.19e-36!53;CL:0000051!1.19e-36!53;CL:0000838!2.38e-35!52;CL:0000084!4.23e-19!25;CL:0000827!4.23e-19!25;CL:0000791!2.01e-18!18;CL:0000789!2.01e-18!18;CL:0002420!2.01e-18!18;CL:0002419!2.01e-18!18;CL:0000790!2.01e-18!18;CL:0000738!9.09e-18!140;CL:0002087!1.42e-17!119;CL:0000988!2.20e-17!182;CL:0000037!3.76e-17!172;CL:0000566!3.76e-17!172;CL:0002032!6.08e-17!165;CL:0000837!6.08e-17!165;CL:0000625!1.41e-15!11;CL:0002031!2.14e-15!124;CL:0000945!6.65e-14!24;CL:0000826!6.65e-14!24 | |ontology_enrichment_celltype=CL:0000542!1.19e-36!53;CL:0000051!1.19e-36!53;CL:0000838!2.38e-35!52;CL:0000084!4.23e-19!25;CL:0000827!4.23e-19!25;CL:0000791!2.01e-18!18;CL:0000789!2.01e-18!18;CL:0002420!2.01e-18!18;CL:0002419!2.01e-18!18;CL:0000790!2.01e-18!18;CL:0000738!9.09e-18!140;CL:0002087!1.42e-17!119;CL:0000988!2.20e-17!182;CL:0000037!3.76e-17!172;CL:0000566!3.76e-17!172;CL:0002032!6.08e-17!165;CL:0000837!6.08e-17!165;CL:0000625!1.41e-15!11;CL:0002031!2.14e-15!124;CL:0000945!6.65e-14!24;CL:0000826!6.65e-14!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.02e-19;18!CL:0000789;2.02e-19;18!CL:0002419;2.02e-19;18!CL:0000625;1.78e-18;11!CL:0000084;3.43e-17;25!CL:0000542;2.00e-15;53!CL:0000945;4.96e-08;24!CL:0002127;2.30e-07;1!CL:0000911;2.30e-07;1!CL:0000814;2.30e-07;1!CL:0000946;6.48e-07;1!CL:0000222;6.48e-07;1!CL:0000895;6.48e-07;1!CL:0000786;6.48e-07;1 | |ontology_enrichment_celltype_v019=CL:0000791;2.02e-19;18!CL:0000789;2.02e-19;18!CL:0002419;2.02e-19;18!CL:0000625;1.78e-18;11!CL:0000084;3.43e-17;25!CL:0000542;2.00e-15;53!CL:0000945;4.96e-08;24!CL:0002127;2.30e-07;1!CL:0000911;2.30e-07;1!CL:0000814;2.30e-07;1!CL:0000946;6.48e-07;1!CL:0000222;6.48e-07;1!CL:0000895;6.48e-07;1!CL:0000786;6.48e-07;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.41e-27,53;CL:0000051,2.41e-27,53;CL:0000838,1.39e-24,52;CL:0000791,2.07e-19,18;CL:0000789,2.07e-19,18;CL:0002420,2.07e-19,18;CL:0002419,2.07e-19,18;CL:0000790,2.07e-19,18;CL:0000625,2.25e-18,11;CL:0000084,4.19e-17,25;CL:0000827,4.19e-17,25;CL:0002031,6.54e-13,120;CL:0000893,9.00e-13,2;CL:0002489,9.00e-13,2;CL:0000809,9.00e-13,2;CL:0000808,9.00e-13,2;CL:0000894,9.00e-13,2;CL:0000806,9.00e-13,2;CL:0000807,9.00e-13,2;CL:0000805,9.00e-13,2;CL:0002425,9.00e-13,2;CL:0000738,2.43e-12,136;CL:0002087,5.19e-12,115;CL:0002032,4.99e-11,161;CL:0000837,4.99e-11,161;CL:0000037,2.17e-10,168;CL:0000988,1.20e-09,177;CL:0000945,6.21e-08,24;CL:0000826,6.21e-08,24;CL:0002127,2.10e-07,1;CL:0000914,2.10e-07,1;CL:0000911,2.10e-07,1;CL:0000814,2.10e-07,1;CL:0002042,2.10e-07,1;CL:0002039,2.10e-07,1;CL:0002040,2.10e-07,1;CL:0002041,2.10e-07,1;CL:0000810,4.85e-07,1;CL:0000895,4.85e-07,1;CL:0002436,4.85e-07,1;CL:0002427,4.85e-07,1;CL:0002428,4.85e-07,1;CL:0002429,4.85e-07,1;CL:0002433,4.85e-07,1;CL:0002431,4.85e-07,1;CL:0002432,4.85e-07,1;CL:0000946,9.73e-07,1;CL:0000786,9.73e-07,1;CL:0000980,9.73e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.02e-19;18!CL:0000051;2.00e-15;53!CL:0002425;1.31e-12;2!CL:0002427;6.48e-07;1 | |ontology_enrichment_development_v019=CL:0000790;2.02e-19;18!CL:0000051;2.00e-15;53!CL:0002425;1.31e-12;2!CL:0002427;6.48e-07;1 | ||
|ontology_enrichment_disease=DOID:0060058!7.35e-10!10;DOID:2531!4.61e-08!51;DOID:0060083!4.61e-08!51 | |ontology_enrichment_disease=DOID:0060058!7.35e-10!10;DOID:2531!4.61e-08!51;DOID:0060083!4.61e-08!51 | ||
|ontology_enrichment_disease_v019=DOID:630;2.30e-07;1!DOID:0050177;2.30e-07;1!DOID:0050427;2.30e-07;1!DOID:12603;6.48e-07;1 | |ontology_enrichment_disease_v019=DOID:630;2.30e-07;1!DOID:0050177;2.30e-07;1!DOID:0050427;2.30e-07;1!DOID:12603;6.48e-07;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,2.52e-07,1;DOID:0050177,2.52e-07,1;DOID:0050427,2.52e-07,1;DOID:12603,5.14e-07,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,8.45e-07,4;UBERON:0005058,8.45e-07,4;UBERON:0009113,8.45e-07,4;UBERON:0003295,8.45e-07,4;UBERON:0005562,8.45e-07,4 | |||
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|short_description=p3@APOBEC3H | |short_description=p3@APOBEC3H | ||
}} | }} |
Latest revision as of 17:59, 24 September 2015
Short description: | p3@APOBEC3H |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_APOBEC3H_5end |
Coexpression cluster: | C239_CD4_lymphangiectasia_CD8_NK_mycosis_Renal_hairy |
Association with transcript: | -5bp_to_ENST00000348946, ENST00000421988, ENST00000442487, NM_001166002, NM_001166003, NM_001166004, NM_181773_5end |
EntrezGene: | APOBEC3H |
HGNC: | 24100 |
UniProt: | E9PF38Q6NTF7B7TQM5B7TQM9B7TQM3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 8.45e-07 | 4 |
hemolymphoid system gland | 8.45e-07 | 4 |
thymic region | 8.45e-07 | 4 |
pharyngeal gland | 8.45e-07 | 4 |
thymus primordium | 8.45e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.52e-07 | 1 |
monogenic disease | 2.52e-07 | 1 |
xeroderma pigmentosum | 2.52e-07 | 1 |
acute leukemia | 5.14e-07 | 1 |