FFCP PHASE1:Hg19::chr17:10558497..10558505,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4621 | |EntrezGene=4621 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7573 | |HGNC=7573 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-112bp_to_BC172385_5end | |association_with_transcript=-112bp_to_BC172385_5end | ||
|cluster_id=chr17:10558497..10558505,- | |||
|coexpression_cluster_id=C163 | |coexpression_cluster_id=C163 | ||
|description=CAGE_peak_11_at_MYH3_5end | |description=CAGE_peak_11_at_MYH3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000188!1.08e-22!9;CL:0002575!2.07e-12!2;CL:0000594!1.30e-08!3 | |ontology_enrichment_celltype=CL:0000188!1.08e-22!9;CL:0002575!2.07e-12!2;CL:0000594!1.30e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000188;2.19e-12;9 | |ontology_enrichment_celltype_v019=CL:0000188;2.19e-12;9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000188,2.19e-12,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!2.62e-23!1;UBERON:0000341!1.85e-12!2;UBERON:0000974!8.84e-10!10;UBERON:0009722!7.16e-09!11;UBERON:0007690!7.16e-09!11;UBERON:0006947!1.12e-08!3;UBERON:0004054!1.12e-08!3;UBERON:0005904!8.14e-07!4;UBERON:0002370!9.63e-07!4;UBERON:0005058!9.63e-07!4;UBERON:0009113!9.63e-07!4;UBERON:0003295!9.63e-07!4;UBERON:0005562!9.63e-07!4;UBERON:0008814!9.64e-07!15 | |ontology_enrichment_uberon=UBERON:0001301!2.62e-23!1;UBERON:0000341!1.85e-12!2;UBERON:0000974!8.84e-10!10;UBERON:0009722!7.16e-09!11;UBERON:0007690!7.16e-09!11;UBERON:0006947!1.12e-08!3;UBERON:0004054!1.12e-08!3;UBERON:0005904!8.14e-07!4;UBERON:0002370!9.63e-07!4;UBERON:0005058!9.63e-07!4;UBERON:0009113!9.63e-07!4;UBERON:0003295!9.63e-07!4;UBERON:0005562!9.63e-07!4;UBERON:0008814!9.64e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.63e-26;16!UBERON:0002036;7.63e-26;16!UBERON:0002385;1.84e-13;31!UBERON:0001015;1.84e-13;31!UBERON:0000383;1.84e-13;31 | |ontology_enrichment_uberon_v019=UBERON:0001134;7.63e-26;16!UBERON:0002036;7.63e-26;16!UBERON:0002385;1.84e-13;31!UBERON:0001015;1.84e-13;31!UBERON:0000383;1.84e-13;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.20e-07,62;UBERON:0002036,1.20e-07,62;UBERON:0003082,1.20e-07,62;UBERON:0002385,1.91e-07,64;UBERON:0001015,1.91e-07,64;UBERON:0000383,1.91e-07,64;UBERON:0002329,7.93e-07,71;UBERON:0003059,7.93e-07,71;UBERON:0007282,7.93e-07,71;UBERON:0004290,7.93e-07,71;UBERON:0009618,7.93e-07,71;UBERON:0003077,9.51e-07,72;UBERON:0007285,9.51e-07,72 | |||
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|short_description=p11@MYH3 | |short_description=p11@MYH3 | ||
}} | }} |
Latest revision as of 15:15, 18 September 2015
Short description: | p11@MYH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_MYH3_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | -112bp_to_BC172385_5end |
EntrezGene: | MYH3 |
HGNC: | 7573 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 2.19e-12 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.20e-07 | 62 |
striated muscle tissue | 1.20e-07 | 62 |
myotome | 1.20e-07 | 62 |
muscle tissue | 1.91e-07 | 64 |
musculature | 1.91e-07 | 64 |
musculature of body | 1.91e-07 | 64 |
somite | 7.93e-07 | 71 |
presomitic mesoderm | 7.93e-07 | 71 |
presumptive segmental plate | 7.93e-07 | 71 |
dermomyotome | 7.93e-07 | 71 |
trunk paraxial mesoderm | 7.93e-07 | 71 |
paraxial mesoderm | 9.51e-07 | 72 |
presumptive paraxial mesoderm | 9.51e-07 | 72 |