FFCP PHASE1:Hg19::chr2:204732580..204732598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1493 | |EntrezGene=1493 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2505 | |HGNC=2505 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=9bp_to_ENST00000541886_5end | |association_with_transcript=9bp_to_ENST00000541886_5end | ||
|cluster_id=chr2:204732580..204732598,+ | |||
|coexpression_cluster_id=C103 | |coexpression_cluster_id=C103 | ||
|description=CAGE_peak_2_at_CTLA4_5end | |description=CAGE_peak_2_at_CTLA4_5end | ||
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|ontology_enrichment_celltype=CL:0000791!2.23e-21!18;CL:0000789!2.23e-21!18;CL:0002420!2.23e-21!18;CL:0002419!2.23e-21!18;CL:0000790!2.23e-21!18;CL:0000084!1.93e-19!25;CL:0000827!1.93e-19!25;CL:0000738!5.21e-18!140;CL:0002087!1.29e-15!119;CL:0000625!1.49e-14!11;CL:0002031!1.01e-11!124;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000988!4.78e-11!182;CL:0000838!8.27e-11!52;CL:0000542!1.85e-10!53;CL:0000051!1.85e-10!53;CL:0000624!4.16e-10!6;CL:0002032!7.01e-10!165;CL:0000837!7.01e-10!165 | |ontology_enrichment_celltype=CL:0000791!2.23e-21!18;CL:0000789!2.23e-21!18;CL:0002420!2.23e-21!18;CL:0002419!2.23e-21!18;CL:0000790!2.23e-21!18;CL:0000084!1.93e-19!25;CL:0000827!1.93e-19!25;CL:0000738!5.21e-18!140;CL:0002087!1.29e-15!119;CL:0000625!1.49e-14!11;CL:0002031!1.01e-11!124;CL:0000037!1.76e-11!172;CL:0000566!1.76e-11!172;CL:0000988!4.78e-11!182;CL:0000838!8.27e-11!52;CL:0000542!1.85e-10!53;CL:0000051!1.85e-10!53;CL:0000624!4.16e-10!6;CL:0002032!7.01e-10!165;CL:0000837!7.01e-10!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.97e-36;18!CL:0000789;2.97e-36;18!CL:0002419;2.97e-36;18!CL:0000084;4.58e-31;25!CL:0000625;5.32e-24;11!CL:0000624;2.39e-16;6!CL:0000542;2.75e-09;53!CL:0000898;3.70e-09;3!CL:0000226;1.18e-08;3!CL:0000842;1.18e-08;3!CL:0000623;2.65e-08;3!CL:0002619;6.91e-08;3!CL:0000815;9.94e-07;2!CL:0000792;9.94e-07;2!CL:0002677;9.94e-07;2 | |ontology_enrichment_celltype_v019=CL:0000791;2.97e-36;18!CL:0000789;2.97e-36;18!CL:0002419;2.97e-36;18!CL:0000084;4.58e-31;25!CL:0000625;5.32e-24;11!CL:0000624;2.39e-16;6!CL:0000542;2.75e-09;53!CL:0000898;3.70e-09;3!CL:0000226;1.18e-08;3!CL:0000842;1.18e-08;3!CL:0000623;2.65e-08;3!CL:0002619;6.91e-08;3!CL:0000815;9.94e-07;2!CL:0000792;9.94e-07;2!CL:0002677;9.94e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.63e-36,18;CL:0000789,2.63e-36,18;CL:0002420,2.63e-36,18;CL:0002419,2.63e-36,18;CL:0000790,2.63e-36,18;CL:0000084,3.98e-31,25;CL:0000827,3.98e-31,25;CL:0000625,4.69e-24,11;CL:0000738,2.40e-17,136;CL:0000838,3.17e-17,52;CL:0000542,8.73e-17,53;CL:0000051,8.73e-17,53;CL:0000624,2.39e-16,6;CL:0002087,2.92e-16,115;CL:0000037,4.30e-12,168;CL:0002031,7.43e-12,120;CL:0000988,5.63e-11,177;CL:0002032,2.57e-10,161;CL:0000837,2.57e-10,161;CL:0000898,3.71e-09,3;CL:0000226,1.18e-08,3;CL:0000842,1.18e-08,3;CL:0000623,2.55e-08,3;CL:0000825,2.55e-08,3;CL:0002619,6.75e-08,3;CL:0000815,9.95e-07,2;CL:0000792,9.95e-07,2;CL:0002677,9.95e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;2.97e-36;18!CL:0000051;2.75e-09;53 | |ontology_enrichment_development_v019=CL:0000790;2.97e-36;18!CL:0000051;2.75e-09;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!8.27e-13!15;UBERON:0000179!8.27e-13!15;UBERON:0000463!8.27e-13!15;UBERON:0007023!1.46e-10!115;UBERON:0002390!3.95e-10!102;UBERON:0003061!3.95e-10!102;UBERON:0002193!9.39e-10!112 | |ontology_enrichment_uberon=UBERON:0000178!8.27e-13!15;UBERON:0000179!8.27e-13!15;UBERON:0000463!8.27e-13!15;UBERON:0007023!1.46e-10!115;UBERON:0002390!3.95e-10!102;UBERON:0003061!3.95e-10!102;UBERON:0002193!9.39e-10!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.70e-11;15!UBERON:0000179;3.70e-11;15!UBERON:0000463;3.70e-11;15!UBERON:0002390;1.69e-08;32!UBERON:0004177;1.21e-07;5!UBERON:0005057;1.21e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000178;3.70e-11;15!UBERON:0000179;3.70e-11;15!UBERON:0000463;3.70e-11;15!UBERON:0002390;1.69e-08;32!UBERON:0004177;1.21e-07;5!UBERON:0005057;1.21e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.65e-11,15;UBERON:0000179,3.65e-11,15;UBERON:0000463,3.65e-11,15;UBERON:0004177,1.67e-08,7;UBERON:0005057,1.67e-08,7;UBERON:0002193,8.17e-08,108;UBERON:0002390,2.08e-07,98;UBERON:0003061,2.08e-07,98 | |||
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|short_description=p2@CTLA4 | |short_description=p2@CTLA4 | ||
}} | }} |
Latest revision as of 16:14, 19 September 2015
Short description: | p2@CTLA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CTLA4_5end |
Coexpression cluster: | C103_CD4_CD8_Natural_Peripheral_Whole_Neutrophils_Basophils |
Association with transcript: | 9bp_to_ENST00000541886_5end |
EntrezGene: | CTLA4 |
HGNC: | 2505 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.63e-36 | 18 |
alpha-beta T cell | 2.63e-36 | 18 |
immature T cell | 2.63e-36 | 18 |
mature T cell | 2.63e-36 | 18 |
immature alpha-beta T cell | 2.63e-36 | 18 |
T cell | 3.98e-31 | 25 |
pro-T cell | 3.98e-31 | 25 |
CD8-positive, alpha-beta T cell | 4.69e-24 | 11 |
leukocyte | 2.40e-17 | 136 |
lymphoid lineage restricted progenitor cell | 3.17e-17 | 52 |
lymphocyte | 8.73e-17 | 53 |
common lymphoid progenitor | 8.73e-17 | 53 |
CD4-positive, alpha-beta T cell | 2.39e-16 | 6 |
nongranular leukocyte | 2.92e-16 | 115 |
hematopoietic stem cell | 4.30e-12 | 168 |
hematopoietic lineage restricted progenitor cell | 7.43e-12 | 120 |
hematopoietic cell | 5.63e-11 | 177 |
hematopoietic oligopotent progenitor cell | 2.57e-10 | 161 |
hematopoietic multipotent progenitor cell | 2.57e-10 | 161 |
naive T cell | 3.71e-09 | 3 |
single nucleate cell | 1.18e-08 | 3 |
mononuclear cell | 1.18e-08 | 3 |
natural killer cell | 2.55e-08 | 3 |
pro-NK cell | 2.55e-08 | 3 |
adult endothelial progenitor cell | 6.75e-08 | 3 |
regulatory T cell | 9.95e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 9.95e-07 | 2 |
naive regulatory T cell | 9.95e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 3.65e-11 | 15 |
haemolymphatic fluid | 3.65e-11 | 15 |
organism substance | 3.65e-11 | 15 |
hemopoietic organ | 1.67e-08 | 7 |
immune organ | 1.67e-08 | 7 |
hemolymphoid system | 8.17e-08 | 108 |
hematopoietic system | 2.08e-07 | 98 |
blood island | 2.08e-07 | 98 |